RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A MTO1P53070 669 aa2.84□□□□□ -1.95
YLR035C-AYLR035C-A TSC13Q99190 310 aa2.84□□□□□ -1.95
YLR035C-AYLR035C-A AHP1P38013 176 aaKnown RBP2.84□□□□□ -1.95
YLR035C-AYLR035C-A MSB3P48566 633 aaPredicted RBP2.84□□□□□ -1.95
YLR035C-AYLR035C-A SUT1P53032 299 aaKnown RBP2.84□□□□□ -1.95
YLR035C-AYLR035C-A SCW11P53189 542 aa2.84□□□□□ -1.95
YLR035C-AYLR035C-A STE6P12866 1290 aa2.83□□□□□ -1.96
YLR035C-AYLR035C-A HAT1Q12341 374 aa2.83□□□□□ -1.96
YLR035C-AYLR035C-A TY1A-DR3Q12441 440 aa2.83□□□□□ -1.96
YLR035C-AYLR035C-A MLF3P32047 452 aa2.83□□□□□ -1.96
YLR035C-AYLR035C-A ATG3P40344 310 aa2.83□□□□□ -1.96
YLR035C-AYLR035C-A YIR007WP40566 764 aa2.83□□□□□ -1.96
YLR035C-AYLR035C-A VAN1P23642 535 aa2.83□□□□□ -1.96
YLR035C-AYLR035C-A ISC10P32645 267 aa2.83□□□□□ -1.96
YLR035C-AYLR035C-A NUP85P46673 744 aa2.83□□□□□ -1.96
YLR035C-AYLR035C-A APL6P46682 809 aa2.82□□□□□ -1.96
YLR035C-AYLR035C-A NAM8Q00539 523 aaKnown RBP2.82□□□□□ -1.96
YLR035C-AYLR035C-A YLR346CQ06139 101 aa2.82□□□□□ -1.96
YLR035C-AYLR035C-A SHM1P37292 490 aaPredicted RBP2.81□□□□□ -1.96
YLR035C-AYLR035C-A RPB10P22139 70 aa2.81□□□□□ -1.96
YLR035C-AYLR035C-A STB3Q12427 513 aa2.81□□□□□ -1.96
YLR035C-AYLR035C-A GRS1P38088 690 aaKnown RBP2.81□□□□□ -1.96
YLR035C-AYLR035C-A YJL181WP46987 611 aa2.81□□□□□ -1.96
YLR035C-AYLR035C-A PHO87P25360 923 aa2.8□□□□□ -1.96
YLR035C-AYLR035C-A SUM1P46676 1062 aa2.8□□□□□ -1.96
YLR035C-AYLR035C-A MRPL16P38064 232 aa2.8□□□□□ -1.96
YLR035C-AYLR035C-A THI12P42883 340 aa2.8□□□□□ -1.96
YLR035C-AYLR035C-A THI5P43534 340 aa2.8□□□□□ -1.96
YLR035C-AYLR035C-A THI11P47183 340 aa2.8□□□□□ -1.96
YLR035C-AYLR035C-A PNP1Q05788 311 aa2.8□□□□□ -1.96
YLR035C-AYLR035C-A THI13Q07748 340 aa2.8□□□□□ -1.96
YLR035C-AYLR035C-A GLO3P38682 493 aaKnown RBP2.8□□□□□ -1.96
YLR035C-AYLR035C-A KAR5Q04746 504 aa2.8□□□□□ -1.96
YLR035C-AYLR035C-A LCB5Q06147 687 aaKnown RBP2.8□□□□□ -1.96
YLR035C-AYLR035C-A ALD4P46367 519 aaKnown RBP2.79□□□□□ -1.96
YLR035C-AYLR035C-A MRX12P47084 519 aa2.79□□□□□ -1.96
YLR035C-AYLR035C-A YMR265CQ03508 461 aaKnown RBP2.79□□□□□ -1.96
YLR035C-AYLR035C-A YTA6P40328 754 aa2.79□□□□□ -1.96
YLR035C-AYLR035C-A UBP2Q01476 1272 aa2.79□□□□□ -1.96
YLR035C-AYLR035C-A HAP4P14064 554 aa2.78□□□□□ -1.96
YLR035C-AYLR035C-A JJJ2P46997 583 aa2.78□□□□□ -1.96
YLR035C-AYLR035C-A KRE33P53914 1056 aaKnown RBP2.78□□□□□ -1.96
YLR035C-AYLR035C-A PSH1Q12161 406 aa2.78□□□□□ -1.96
YLR035C-AYLR035C-A IRE1P32361 1115 aa2.78□□□□□ -1.96
YLR035C-AYLR035C-A SUV3P32580 737 aa2.78□□□□□ -1.96
YLR035C-AYLR035C-A SSN3P39073 555 aa2.78□□□□□ -1.96
YLR035C-AYLR035C-A ADE12P80210 433 aaKnown RBP2.78□□□□□ -1.96
YLR035C-AYLR035C-A TY1A-BLQ12266 440 aa2.78□□□□□ -1.96
YLR035C-AYLR035C-A SSA1P10591 642 aaKnown RBP2.78□□□□□ -1.96
YLR035C-AYLR035C-A OSH7P38755 437 aa2.78□□□□□ -1.96
YLR035C-AYLR035C-A PDC6P26263 563 aaKnown RBP2.77□□□□□ -1.97
YLR035C-AYLR035C-A NAB2P32505 525 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
YLR035C-AYLR035C-A QDR2P40474 542 aa2.77□□□□□ -1.97
YLR035C-AYLR035C-A ROG3P43602 733 aa2.77□□□□□ -1.97
YLR035C-AYLR035C-A BSD2P38356 321 aa2.77□□□□□ -1.97
YLR035C-AYLR035C-A BOL3P39724 118 aa2.77□□□□□ -1.97
YLR035C-AYLR035C-A GAS4Q08271 471 aa2.77□□□□□ -1.97
YLR035C-AYLR035C-A BOI1P38041 980 aaKnown RBP2.77□□□□□ -1.97
YLR035C-AYLR035C-A YFL034WP43564 1073 aa2.77□□□□□ -1.97
YLR035C-AYLR035C-A RPP2BP02400 110 aaKnown RBP2.76□□□□□ -1.97
YLR035C-AYLR035C-A MDJ1P35191 511 aa2.76□□□□□ -1.97
YLR035C-AYLR035C-A CWH41P53008 833 aa2.76□□□□□ -1.97
YLR035C-AYLR035C-A CDC19P00549 500 aaKnown RBP2.76□□□□□ -1.97
YLR035C-AYLR035C-A SPT2P06843 333 aaPredicted RBP2.76□□□□□ -1.97
YLR035C-AYLR035C-A CUZ1P53899 274 aa2.76□□□□□ -1.97
YLR035C-AYLR035C-A FUR4P05316 633 aaKnown RBP2.76□□□□□ -1.97
YLR035C-AYLR035C-A YBR197CP38306 217 aa2.76□□□□□ -1.97
YLR035C-AYLR035C-A HPF1Q05164 967 aa2.76□□□□□ -1.97
YLR035C-AYLR035C-A YBL113CQ7M4S9 792 aa2.76□□□□□ -1.97
YLR035C-AYLR035C-A TRS33Q99394 268 aa2.75□□□□□ -1.97
YLR035C-AYLR035C-A SLA1P32790 1244 aa2.75□□□□□ -1.97
YLR035C-AYLR035C-A CAB1Q04430 367 aa2.75□□□□□ -1.97
YLR035C-AYLR035C-A YDL176WQ12027 708 aa2.75□□□□□ -1.97
YLR035C-AYLR035C-A CEM1P39525 442 aa2.74□□□□□ -1.97
YLR035C-AYLR035C-A ERP5P38819 212 aa2.74□□□□□ -1.97
YLR035C-AYLR035C-A YGR035CP53222 116 aa2.73□□□□□ -1.97
YLR035C-AYLR035C-A YNR040WP53736 256 aa2.73□□□□□ -1.97
YLR035C-AYLR035C-A RPS31P05759 152 aaKnown RBP2.73□□□□□ -1.97
YLR035C-AYLR035C-A UTP13Q05946 817 aaKnown RBP2.73□□□□□ -1.97
YLR035C-AYLR035C-A URN1Q06525 465 aaKnown RBP2.73□□□□□ -1.97
YLR035C-AYLR035C-A MRP10O75012 95 aa2.73□□□□□ -1.97
YLR035C-AYLR035C-A GEF1P37020 779 aa2.73□□□□□ -1.97
YLR035C-AYLR035C-A GLY1P37303 387 aaKnown RBP2.73□□□□□ -1.97
YLR035C-AYLR035C-A YPQ2Q06328 317 aa2.73□□□□□ -1.97
YLR035C-AYLR035C-A TY1A-MR1Q04215 440 aa2.72□□□□□ -1.97
YLR035C-AYLR035C-A PUF6Q04373 656 aaKnown RBP2.72□□□□□ -1.97
YLR035C-AYLR035C-A CCP1P00431 361 aa2.72□□□□□ -1.97
YLR035C-AYLR035C-A CDC3P32457 520 aaKnown RBP2.72□□□□□ -1.97
YLR035C-AYLR035C-A CUS1Q02554 436 aaPredicted RBP2.72□□□□□ -1.97
YLR035C-AYLR035C-A THI72Q08579 599 aa2.72□□□□□ -1.97
YLR035C-AYLR035C-A FPS1P23900 669 aa2.72□□□□□ -1.97
YLR035C-AYLR035C-A VMA3P25515 160 aa2.72□□□□□ -1.97
YLR035C-AYLR035C-A QDR1P40475 563 aa2.72□□□□□ -1.97
YLR035C-AYLR035C-A SBE2P42223 864 aaKnown RBP2.72□□□□□ -1.97
YLR035C-AYLR035C-A ALD2P47771 506 aa2.72□□□□□ -1.97
YLR035C-AYLR035C-A SIS2P36024 562 aa2.71□□□□□ -1.98
YLR035C-AYLR035C-A AIM44Q99299 758 aa2.71□□□□□ -1.98
YLR035C-AYLR035C-A MRPL33P20084 86 aa2.7□□□□□ -1.98
YLR035C-AYLR035C-A NGR1P32831 672 aaKnown RBP2.7□□□□□ -1.98
YLR035C-AYLR035C-A HXT5P38695 592 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms