RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C UTP7P40055 554 aaKnown RBP7.19□□□□□ -1.26
CMS1YLR003C ALA1P40825 983 aaKnown RBP7.18□□□□□ -1.26
CMS1YLR003C YCK2P23292 546 aaKnown RBP7.17□□□□□ -1.26
CMS1YLR003C ISF1P32488 338 aa7.17□□□□□ -1.26
CMS1YLR003C BOI2P39969 1040 aa7.17□□□□□ -1.26
CMS1YLR003C SUM1P46676 1062 aa7.17□□□□□ -1.26
CMS1YLR003C JJJ2P46997 583 aa7.17□□□□□ -1.26
CMS1YLR003C MCM16Q12262 181 aa7.17□□□□□ -1.26
CMS1YLR003C IRE1P32361 1115 aa7.15□□□□□ -1.26
CMS1YLR003C KIN1P13185 1064 aa7.14□□□□□ -1.27
CMS1YLR003C SPT5P27692 1063 aaKnown RBP7.14□□□□□ -1.27
CMS1YLR003C MET1P36150 593 aa7.14□□□□□ -1.27
CMS1YLR003C HAL5P38970 855 aaKnown RBP7.14□□□□□ -1.27
CMS1YLR003C YDR215CQ12240 137 aa7.14□□□□□ -1.27
CMS1YLR003C MRPL16P38064 232 aa7.11□□□□□ -1.27
CMS1YLR003C AMN1P38285 549 aaPredicted RBP7.11□□□□□ -1.27
CMS1YLR003C SLN1P39928 1220 aaPredicted RBP7.11□□□□□ -1.27
CMS1YLR003C SLX8P40072 274 aa7.11□□□□□ -1.27
CMS1YLR003C GLT1Q12680 2145 aaKnown RBP7.1□□□□□ -1.27
CMS1YLR003C KNS1P32350 737 aaPredicted RBP7.1□□□□□ -1.27
CMS1YLR003C SHM1P37292 490 aaPredicted RBP7.1□□□□□ -1.27
CMS1YLR003C UTP13Q05946 817 aaKnown RBP7.09□□□□□ -1.27
CMS1YLR003C PDC5P16467 563 aaKnown RBP7.08□□□□□ -1.28
CMS1YLR003C ATG3P40344 310 aa7.08□□□□□ -1.28
CMS1YLR003C LSB6P42951 607 aa7.08□□□□□ -1.28
CMS1YLR003C MCA1Q08601 432 aa7.08□□□□□ -1.28
CMS1YLR003C PSH1Q12161 406 aa7.08□□□□□ -1.28
CMS1YLR003C STB3Q12427 513 aa7.08□□□□□ -1.28
CMS1YLR003C PDC6P26263 563 aaKnown RBP7.07□□□□□ -1.28
CMS1YLR003C TAT1P38085 619 aa7.07□□□□□ -1.28
CMS1YLR003C YBL036CP38197 257 aa7.07□□□□□ -1.28
CMS1YLR003C SOH1P38633 127 aa7.07□□□□□ -1.28
CMS1YLR003C HDA3Q06623 655 aa7.07□□□□□ -1.28
CMS1YLR003C YDJ1P25491 409 aaKnown RBP7.06□□□□□ -1.28
CMS1YLR003C SPR3P41901 512 aa7.05□□□□□ -1.28
CMS1YLR003C GUA1P38625 525 aaKnown RBP7.04□□□□□ -1.28
CMS1YLR003C TY1A-DR2Q03964 440 aaKnown RBP7.04□□□□□ -1.28
CMS1YLR003C YPP1P46951 817 aa7.02□□□□□ -1.29
CMS1YLR003C HPC2Q01448 625 aa7.01□□□□□ -1.29
CMS1YLR003C RPS31P05759 152 aaKnown RBP7□□□□□ -1.29
CMS1YLR003C MAC1P35192 417 aa7□□□□□ -1.29
CMS1YLR003C PRY1P47032 299 aa7□□□□□ -1.29
CMS1YLR003C RPP1AP05318 106 aaPredicted RBP6.99□□□□□ -1.29
CMS1YLR003C YPQ2Q06328 317 aa6.99□□□□□ -1.29
CMS1YLR003C LEU1P07264 779 aaKnown RBP6.98□□□□□ -1.29
CMS1YLR003C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
CMS1YLR003C YPL034WQ03083 165 aa6.97□□□□□ -1.29
CMS1YLR003C TFB3Q03290 321 aa6.97□□□□□ -1.29
CMS1YLR003C BRL1P38770 471 aa6.96□□□□□ -1.3
CMS1YLR003C SWI5P08153 709 aa6.95□□□□□ -1.3
CMS1YLR003C MSC7P38694 644 aa6.95□□□□□ -1.3
CMS1YLR003C RGP1P16664 663 aa6.93□□□□□ -1.3
CMS1YLR003C TPS3P38426 1054 aaKnown RBP6.93□□□□□ -1.3
CMS1YLR003C ALD2P47771 506 aa6.93□□□□□ -1.3
CMS1YLR003C ALO1P54783 526 aaKnown RBP6.92□□□□□ -1.3
CMS1YLR003C SUP45P12385 437 aaKnown RBP6.91□□□□□ -1.3
CMS1YLR003C AIM9P40053 627 aaKnown RBP6.91□□□□□ -1.3
CMS1YLR003C YTA6P40328 754 aa6.91□□□□□ -1.3
CMS1YLR003C MCM1P11746 286 aa6.9□□□□□ -1.3
CMS1YLR003C BIO2P32451 375 aa6.9□□□□□ -1.3
CMS1YLR003C NHA1Q99271 985 aa6.9□□□□□ -1.3
CMS1YLR003C YNL165WP53891 406 aa6.89□□□□□ -1.31
CMS1YLR003C ENO2P00925 437 aaKnown RBP6.88□□□□□ -1.31
CMS1YLR003C RPS6AP0CX37 236 aaKnown RBP6.88□□□□□ -1.31
CMS1YLR003C RPS6BP0CX38 236 aaPredicted RBP6.88□□□□□ -1.31
CMS1YLR003C OMA1P36163 345 aa6.88□□□□□ -1.31
CMS1YLR003C YFL034WP43564 1073 aa6.88□□□□□ -1.31
CMS1YLR003C ALG14P38242 237 aa6.87□□□□□ -1.31
CMS1YLR003C BUD9P53226 547 aa6.87□□□□□ -1.31
CMS1YLR003C YNL108CP53929 270 aa6.87□□□□□ -1.31
CMS1YLR003C HEH2Q03281 663 aa6.87□□□□□ -1.31
CMS1YLR003C PKC1P24583 1151 aa6.86□□□□□ -1.31
CMS1YLR003C PGM2P37012 569 aaKnown RBP6.86□□□□□ -1.31
CMS1YLR003C RPN1P38764 993 aaKnown RBP6.86□□□□□ -1.31
CMS1YLR003C IRC24P40580 263 aa6.86□□□□□ -1.31
CMS1YLR003C INP52P50942 1183 aa6.86□□□□□ -1.31
CMS1YLR003C LEU3P08638 886 aa6.85□□□□□ -1.31
CMS1YLR003C RIM21P48565 533 aa6.85□□□□□ -1.31
CMS1YLR003C MLF3P32047 452 aa6.84□□□□□ -1.31
CMS1YLR003C NTH2P35172 780 aa6.84□□□□□ -1.31
CMS1YLR003C RDS2P19541 446 aaKnown RBP6.83□□□□□ -1.32
CMS1YLR003C Q0182Q9ZZW1 134 aa6.83□□□□□ -1.32
CMS1YLR003C PRK1P40494 810 aa6.81□□□□□ -1.32
CMS1YLR003C AI3P03877 415 aa6.8□□□□□ -1.32
CMS1YLR003C GIS4Q04233 774 aa6.79□□□□□ -1.32
CMS1YLR003C NAR1P23503 491 aaKnown RBP6.78□□□□□ -1.32
CMS1YLR003C NCL1P38205 684 aaKnown RBP6.78□□□□□ -1.32
CMS1YLR003C MTO1P53070 669 aa6.78□□□□□ -1.32
CMS1YLR003C PGM1P33401 570 aaKnown RBP6.77□□□□□ -1.33
CMS1YLR003C SAC7P17121 654 aa6.76□□□□□ -1.33
CMS1YLR003C PDI1P17967 522 aaKnown RBP6.76□□□□□ -1.33
CMS1YLR003C NAB2P32505 525 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33 RIP-Chip
CMS1YLR003C SKP1P52286 194 aa6.76□□□□□ -1.33
CMS1YLR003C TSC13Q99190 310 aa6.76□□□□□ -1.33
CMS1YLR003C RRM3P38766 723 aa6.74□□□□□ -1.33
CMS1YLR003C ARI1P53111 347 aaKnown RBP6.74□□□□□ -1.33
CMS1YLR003C UTP4Q06679 776 aaKnown RBP6.74□□□□□ -1.33
CMS1YLR003C GAS5Q08193 484 aa6.74□□□□□ -1.33
CMS1YLR003C CYT1P07143 309 aa6.73□□□□□ -1.33
CMS1YLR003C SFA1P32771 386 aa6.71□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms