RNA–Protein interactions for RNA: YLL046C

RNP1, Transcript of Ribonucleoprotein that contains two RNA recognition motifs (RRM), yeast

Gene RNP1, Length 750 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNP1	YLL046C	ALO1	P54783	526 aa	Known RBP	6.58	□□□□□ -1.36
RNP1	YLL046C	STE20	Q03497	939 aa	Known RBP	6.58	□□□□□ -1.36
RNP1	YLL046C	KNS1	P32350	737 aa	Predicted RBP	6.57	□□□□□ -1.36
RNP1	YLL046C	ALA1	P40825	983 aa	Known RBP	6.57	□□□□□ -1.36
RNP1	YLL046C	PRY1	P47032	299 aa		6.56	□□□□□ -1.36
RNP1	YLL046C	YPL034W	Q03083	165 aa		6.56	□□□□□ -1.36
RNP1	YLL046C	PDC5	P16467	563 aa	Known RBP	6.55	□□□□□ -1.36
RNP1	YLL046C	OMA1	P36163	345 aa		6.55	□□□□□ -1.36
RNP1	YLL046C	MAK16	P10962	306 aa	Predicted RBP	6.54	□□□□□ -1.36
RNP1	YLL046C	UTR2	P32623	467 aa		6.54	□□□□□ -1.36
RNP1	YLL046C	FRA1	Q07825	749 aa		6.54	□□□□□ -1.36
RNP1	YLL046C	TBS1	P38114	1094 aa		6.53	□□□□□ -1.36
RNP1	YLL046C	UTP7	P40055	554 aa	Known RBP	6.53	□□□□□ -1.36
RNP1	YLL046C	MRPL16	P38064	232 aa		6.52	□□□□□ -1.37
RNP1	YLL046C	JJJ2	P46997	583 aa		6.52	□□□□□ -1.37
RNP1	YLL046C	SPT2	P06843	333 aa	Predicted RBP	6.51	□□□□□ -1.37
RNP1	YLL046C	IRE1	P32361	1115 aa		6.51	□□□□□ -1.37
RNP1	YLL046C	ISR1	Q06098	443 aa	Known RBP	6.51	□□□□□ -1.37
RNP1	YLL046C	STB3	Q12427	513 aa		6.5	□□□□□ -1.37
RNP1	YLL046C	INP52	P50942	1183 aa		6.48	□□□□□ -1.37
RNP1	YLL046C	SUM1	P46676	1062 aa		6.47	□□□□□ -1.37
RNP1	YLL046C	SSA2	P10592	639 aa	Known RBP	6.46	□□□□□ -1.38
RNP1	YLL046C	TY1A-DR2	Q03964	440 aa	Known RBP	6.44	□□□□□ -1.38
RNP1	YLL046C	AVT1	P47082	602 aa		6.43	□□□□□ -1.38
RNP1	YLL046C	MRX12	P47084	519 aa		6.43	□□□□□ -1.38
RNP1	YLL046C	PDC6	P26263	563 aa	Known RBP	6.42	□□□□□ -1.38
RNP1	YLL046C	ISF1	P32488	338 aa		6.42	□□□□□ -1.38
RNP1	YLL046C	SHM1	P37292	490 aa	Predicted RBP	6.42	□□□□□ -1.38
RNP1	YLL046C	TPS3	P38426	1054 aa	Known RBP	6.42	□□□□□ -1.38
RNP1	YLL046C	SPR3	P41901	512 aa		6.42	□□□□□ -1.38
RNP1	YLL046C	PSH1	Q12161	406 aa		6.42	□□□□□ -1.38
RNP1	YLL046C	EMP47	P43555	445 aa		6.41	□□□□□ -1.38
RNP1	YLL046C	RPP1A	P05318	106 aa	Predicted RBP	6.4	□□□□□ -1.38
RNP1	YLL046C	KIN1	P13185	1064 aa		6.38	□□□□□ -1.39
RNP1	YLL046C	APL6	P46682	809 aa		6.38	□□□□□ -1.39
RNP1	YLL046C	NHA1	Q99271	985 aa		6.38	□□□□□ -1.39
RNP1	YLL046C	HAL5	P38970	855 aa	Known RBP	6.37	□□□□□ -1.39
RNP1	YLL046C	MCM16	Q12262	181 aa		6.37	□□□□□ -1.39
RNP1	YLL046C	CSE4	P36012	229 aa		6.35	□□□□□ -1.39
RNP1	YLL046C	SLX8	P40072	274 aa		6.35	□□□□□ -1.39
RNP1	YLL046C	BUD9	P53226	547 aa		6.35	□□□□□ -1.39
RNP1	YLL046C	ALG14	P38242	237 aa		6.33	□□□□□ -1.4
RNP1	YLL046C	YDJ1	P25491	409 aa	Known RBP	6.32	□□□□□ -1.4
RNP1	YLL046C	PGM2	P37012	569 aa	Known RBP	6.32	□□□□□ -1.4
RNP1	YLL046C	GUA1	P38625	525 aa	Known RBP	6.32	□□□□□ -1.4
RNP1	YLL046C	MSC7	P38694	644 aa		6.31	□□□□□ -1.4
RNP1	YLL046C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	6.3	□□□□□ -1.4	not detected
RNP1	YLL046C	SPT5	P27692	1063 aa	Known RBP	6.29	□□□□□ -1.4
RNP1	YLL046C	YBL036C	P38197	257 aa		6.29	□□□□□ -1.4
RNP1	YLL046C	SOH1	P38633	127 aa		6.29	□□□□□ -1.4
RNP1	YLL046C	HDA3	Q06623	655 aa		6.29	□□□□□ -1.4
RNP1	YLL046C	AI3	P03877	415 aa		6.28	□□□□□ -1.4
RNP1	YLL046C	LEU1	P07264	779 aa	Known RBP	6.28	□□□□□ -1.4
RNP1	YLL046C	MED7	Q08278	222 aa		6.28	□□□□□ -1.4
RNP1	YLL046C	RPS31	P05759	152 aa	Known RBP	6.27	□□□□□ -1.41
RNP1	YLL046C	LIP5	P32875	414 aa		6.27	□□□□□ -1.41
RNP1	YLL046C	ATG3	P40344	310 aa		6.27	□□□□□ -1.41
RNP1	YLL046C	RGP1	P16664	663 aa		6.26	□□□□□ -1.41
RNP1	YLL046C	PGM1	P33401	570 aa	Known RBP	6.26	□□□□□ -1.41
RNP1	YLL046C	YTA6	P40328	754 aa		6.26	□□□□□ -1.41
RNP1	YLL046C	HPC2	Q01448	625 aa		6.26	□□□□□ -1.41
RNP1	YLL046C	AOS1	Q06624	347 aa		6.26	□□□□□ -1.41
RNP1	YLL046C	SAC7	P17121	654 aa		6.25	□□□□□ -1.41
RNP1	YLL046C	COQ2	P32378	372 aa		6.25	□□□□□ -1.41
RNP1	YLL046C	TFB3	Q03290	321 aa		6.25	□□□□□ -1.41
RNP1	YLL046C	UTP13	Q05946	817 aa	Known RBP	6.24	□□□□□ -1.41
RNP1	YLL046C	KAE1	P36132	386 aa		6.22	□□□□□ -1.41
RNP1	YLL046C	ALD2	P47771	506 aa		6.22	□□□□□ -1.41
RNP1	YLL046C	ARI1	P53111	347 aa	Known RBP	6.22	□□□□□ -1.41
RNP1	YLL046C	HEH2	Q03281	663 aa		6.22	□□□□□ -1.41
RNP1	YLL046C	YPQ2	Q06328	317 aa		6.22	□□□□□ -1.41
RNP1	YLL046C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	not detected
RNP1	YLL046C	YKR073C	P36153	106 aa		6.21	□□□□□ -1.42
RNP1	YLL046C	GAS5	Q08193	484 aa		6.21	□□□□□ -1.42
RNP1	YLL046C	TRP3	P00937	484 aa		6.2	□□□□□ -1.42
RNP1	YLL046C	NAR1	P23503	491 aa	Known RBP	6.2	□□□□□ -1.42
RNP1	YLL046C	RRM3	P38766	723 aa		6.2	□□□□□ -1.42
RNP1	YLL046C	TOS1	P38288	455 aa		6.19	□□□□□ -1.42
RNP1	YLL046C	GIS4	Q04233	774 aa		6.19	□□□□□ -1.42
RNP1	YLL046C	SWI5	P08153	709 aa		6.18	□□□□□ -1.42
RNP1	YLL046C	PKC1	P24583	1151 aa		6.18	□□□□□ -1.42
RNP1	YLL046C	ELM1	P32801	640 aa		6.18	□□□□□ -1.42
RNP1	YLL046C	BRL1	P38770	471 aa		6.18	□□□□□ -1.42
RNP1	YLL046C	YPP1	P46951	817 aa		6.18	□□□□□ -1.42
RNP1	YLL046C	BIO2	P32451	375 aa		6.17	□□□□□ -1.42
RNP1	YLL046C	PRK1	P40494	810 aa		6.17	□□□□□ -1.42
RNP1	YLL046C	ENO2	P00925	437 aa	Known RBP	6.16	□□□□□ -1.42
RNP1	YLL046C	SFA1	P32771	386 aa		6.16	□□□□□ -1.42
RNP1	YLL046C	SUP45	P12385	437 aa	Known RBP	6.15	□□□□□ -1.42
RNP1	YLL046C	YNL165W	P53891	406 aa		6.15	□□□□□ -1.42
RNP1	YLL046C	YNL108C	P53929	270 aa		6.15	□□□□□ -1.42
RNP1	YLL046C	MLF3	P32047	452 aa		6.14	□□□□□ -1.43
RNP1	YLL046C	AIM9	P40053	627 aa	Known RBP	6.14	□□□□□ -1.43
RNP1	YLL046C	YLR122C	Q12312	125 aa		6.14	□□□□□ -1.43
RNP1	YLL046C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	6.13	□□□□□ -1.43	not detected
RNP1	YLL046C	NCL1	P38205	684 aa	Known RBP	6.13	□□□□□ -1.43
RNP1	YLL046C	MCM1	P11746	286 aa		6.12	□□□□□ -1.43
RNP1	YLL046C	BRE4	Q07660	1125 aa		6.12	□□□□□ -1.43
RNP1	YLL046C	LEU3	P08638	886 aa		6.11	□□□□□ -1.43
RNP1	YLL046C	RPS6A	P0CX37	236 aa	Known RBP	6.11	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms