RNA–Protein interactions for RNA: YKL017C

HCS1, Transcript of Hexameric DNA polymerase alpha-associated DNA helicase A, yeast

Gene HCS1, Length 2,052 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCS1	YKL017C	YNR014W	P53719	212 aa		4.41	□□□□□ -1.7
HCS1	YKL017C	SUM1	P46676	1062 aa		4.4	□□□□□ -1.71
HCS1	YKL017C	MCM16	Q12262	181 aa		4.4	□□□□□ -1.71
HCS1	YKL017C	GPM1	P00950	247 aa	Known RBP	4.39	□□□□□ -1.71
HCS1	YKL017C	SPT5	P27692	1063 aa	Known RBP	4.39	□□□□□ -1.71
HCS1	YKL017C	HAL5	P38970	855 aa	Known RBP	4.39	□□□□□ -1.71
HCS1	YKL017C	ALA1	P40825	983 aa	Known RBP	4.39	□□□□□ -1.71
HCS1	YKL017C	FPS1	P23900	669 aa		4.38	□□□□□ -1.71
HCS1	YKL017C	IRE1	P32361	1115 aa		4.38	□□□□□ -1.71
HCS1	YKL017C	JJJ2	P46997	583 aa		4.38	□□□□□ -1.71
HCS1	YKL017C	YCK2	P23292	546 aa	Known RBP	4.37	□□□□□ -1.71
HCS1	YKL017C	GUA1	P38625	525 aa	Known RBP	4.37	□□□□□ -1.71
HCS1	YKL017C	BOI2	P39969	1040 aa		4.37	□□□□□ -1.71
HCS1	YKL017C	SLX8	P40072	274 aa		4.37	□□□□□ -1.71
HCS1	YKL017C	YDJ1	P25491	409 aa	Known RBP	4.36	□□□□□ -1.71
HCS1	YKL017C	SHM1	P37292	490 aa	Predicted RBP	4.36	□□□□□ -1.71
HCS1	YKL017C	UTP13	Q05946	817 aa	Known RBP	4.36	□□□□□ -1.71
HCS1	YKL017C	MET1	P36150	593 aa		4.35	□□□□□ -1.71
HCS1	YKL017C	MRPL16	P38064	232 aa		4.35	□□□□□ -1.71
HCS1	YKL017C	YBL036C	P38197	257 aa		4.35	□□□□□ -1.71
HCS1	YKL017C	HDA3	Q06623	655 aa		4.35	□□□□□ -1.71
HCS1	YKL017C	YDR215C	Q12240	137 aa		4.35	□□□□□ -1.71
HCS1	YKL017C	SOH1	P38633	127 aa		4.34	□□□□□ -1.71
HCS1	YKL017C	ATG3	P40344	310 aa		4.34	□□□□□ -1.71
HCS1	YKL017C	PSH1	Q12161	406 aa		4.34	□□□□□ -1.71
HCS1	YKL017C	PDC6	P26263	563 aa	Known RBP	4.34	□□□□□ -1.71
HCS1	YKL017C	SLN1	P39928	1220 aa	Predicted RBP	4.34	□□□□□ -1.71
HCS1	YKL017C	KNS1	P32350	737 aa	Predicted RBP	4.33	□□□□□ -1.72
HCS1	YKL017C	AMN1	P38285	549 aa	Predicted RBP	4.33	□□□□□ -1.72
HCS1	YKL017C	PDC5	P16467	563 aa	Known RBP	4.33	□□□□□ -1.72
HCS1	YKL017C	RPS31	P05759	152 aa	Known RBP	4.32	□□□□□ -1.72
HCS1	YKL017C	SPR3	P41901	512 aa		4.32	□□□□□ -1.72
HCS1	YKL017C	LSB6	P42951	607 aa		4.32	□□□□□ -1.72
HCS1	YKL017C	YPP1	P46951	817 aa		4.32	□□□□□ -1.72
HCS1	YKL017C	HPC2	Q01448	625 aa		4.32	□□□□□ -1.72
HCS1	YKL017C	STB3	Q12427	513 aa		4.32	□□□□□ -1.72
HCS1	YKL017C	TY1A-DR2	Q03964	440 aa	Known RBP	4.31	□□□□□ -1.72
HCS1	YKL017C	MCA1	Q08601	432 aa		4.31	□□□□□ -1.72
HCS1	YKL017C	YPQ2	Q06328	317 aa		4.3	□□□□□ -1.72
HCS1	YKL017C	TAT1	P38085	619 aa		4.3	□□□□□ -1.72
HCS1	YKL017C	LEU1	P07264	779 aa	Known RBP	4.29	□□□□□ -1.72
HCS1	YKL017C	BRL1	P38770	471 aa		4.29	□□□□□ -1.72
HCS1	YKL017C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.29	□□□□□ -1.72	not detected
HCS1	YKL017C	SWI5	P08153	709 aa		4.28	□□□□□ -1.72
HCS1	YKL017C	SUP45	P12385	437 aa	Known RBP	4.28	□□□□□ -1.72
HCS1	YKL017C	RPN1	P38764	993 aa	Known RBP	4.27	□□□□□ -1.73
HCS1	YKL017C	TFB3	Q03290	321 aa		4.27	□□□□□ -1.73
HCS1	YKL017C	RPP1A	P05318	106 aa	Predicted RBP	4.26	□□□□□ -1.73
HCS1	YKL017C	LEU3	P08638	886 aa		4.26	□□□□□ -1.73
HCS1	YKL017C	MSC7	P38694	644 aa		4.26	□□□□□ -1.73
HCS1	YKL017C	PRY1	P47032	299 aa		4.26	□□□□□ -1.73
HCS1	YKL017C	PKC1	P24583	1151 aa		4.26	□□□□□ -1.73
HCS1	YKL017C	BIO2	P32451	375 aa		4.26	□□□□□ -1.73
HCS1	YKL017C	GLT1	Q12680	2145 aa	Known RBP	4.26	□□□□□ -1.73
HCS1	YKL017C	ENO2	P00925	437 aa	Known RBP	4.25	□□□□□ -1.73
HCS1	YKL017C	ALD2	P47771	506 aa		4.25	□□□□□ -1.73
HCS1	YKL017C	YPL034W	Q03083	165 aa		4.25	□□□□□ -1.73
HCS1	YKL017C	RGP1	P16664	663 aa		4.25	□□□□□ -1.73
HCS1	YKL017C	AIM9	P40053	627 aa	Known RBP	4.25	□□□□□ -1.73
HCS1	YKL017C	YNL108C	P53929	270 aa		4.25	□□□□□ -1.73
HCS1	YKL017C	MCM1	P11746	286 aa		4.24	□□□□□ -1.73
HCS1	YKL017C	MAC1	P35192	417 aa		4.24	□□□□□ -1.73
HCS1	YKL017C	YNL165W	P53891	406 aa		4.24	□□□□□ -1.73
HCS1	YKL017C	RPS6A	P0CX37	236 aa	Known RBP	4.23	□□□□□ -1.73
HCS1	YKL017C	RPS6B	P0CX38	236 aa	Predicted RBP	4.23	□□□□□ -1.73
HCS1	YKL017C	YTA6	P40328	754 aa		4.23	□□□□□ -1.73
HCS1	YKL017C	TPS3	P38426	1054 aa	Known RBP	4.23	□□□□□ -1.73
HCS1	YKL017C	YFL034W	P43564	1073 aa		4.23	□□□□□ -1.73
HCS1	YKL017C	RDS2	P19541	446 aa	Known RBP	4.22	□□□□□ -1.73
HCS1	YKL017C	RIM21	P48565	533 aa		4.22	□□□□□ -1.73
HCS1	YKL017C	NHA1	Q99271	985 aa		4.22	□□□□□ -1.73
HCS1	YKL017C	NTH2	P35172	780 aa		4.21	□□□□□ -1.74
HCS1	YKL017C	ALO1	P54783	526 aa	Known RBP	4.21	□□□□□ -1.74
HCS1	YKL017C	HEH2	Q03281	663 aa		4.21	□□□□□ -1.74
HCS1	YKL017C	BUD9	P53226	547 aa		4.2	□□□□□ -1.74
HCS1	YKL017C	MLF3	P32047	452 aa		4.2	□□□□□ -1.74
HCS1	YKL017C	PGM2	P37012	569 aa	Known RBP	4.2	□□□□□ -1.74
HCS1	YKL017C	Q0182	Q9ZZW1	134 aa		4.2	□□□□□ -1.74
HCS1	YKL017C	ALG14	P38242	237 aa		4.19	□□□□□ -1.74
HCS1	YKL017C	OMA1	P36163	345 aa		4.18	□□□□□ -1.74
HCS1	YKL017C	PRK1	P40494	810 aa		4.18	□□□□□ -1.74
HCS1	YKL017C	INP52	P50942	1183 aa		4.18	□□□□□ -1.74
HCS1	YKL017C	PDI1	P17967	522 aa	Known RBP	4.17	□□□□□ -1.74
HCS1	YKL017C	TSC13	Q99190	310 aa		4.17	□□□□□ -1.74
HCS1	YKL017C	SKP1	P52286	194 aa		4.16	□□□□□ -1.74
HCS1	YKL017C	MRX10	Q05648	414 aa		4.16	□□□□□ -1.74
HCS1	YKL017C	NAR1	P23503	491 aa	Known RBP	4.15	□□□□□ -1.74
HCS1	YKL017C	IRC24	P40580	263 aa		4.15	□□□□□ -1.74
HCS1	YKL017C	YJL007C	P47080	104 aa		4.15	□□□□□ -1.74
HCS1	YKL017C	MTO1	P53070	669 aa		4.15	□□□□□ -1.74
HCS1	YKL017C	AI3	P03877	415 aa		4.15	□□□□□ -1.75
HCS1	YKL017C	NCL1	P38205	684 aa	Known RBP	4.15	□□□□□ -1.75
HCS1	YKL017C	GIS4	Q04233	774 aa		4.15	□□□□□ -1.75
HCS1	YKL017C	CYT1	P07143	309 aa		4.14	□□□□□ -1.75
HCS1	YKL017C	UTP4	Q06679	776 aa	Known RBP	4.14	□□□□□ -1.75
HCS1	YKL017C	ENO1	P00924	437 aa	Known RBP	4.13	□□□□□ -1.75
HCS1	YKL017C	SAC7	P17121	654 aa		4.13	□□□□□ -1.75
HCS1	YKL017C	PGM1	P33401	570 aa	Known RBP	4.13	□□□□□ -1.75
HCS1	YKL017C	RQC2	Q12532	1038 aa	Known RBP	4.13	□□□□□ -1.75
HCS1	YKL017C	GAS5	Q08193	484 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms