RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	ICL1	P28240	557 aa	Predicted RBP	4.56	□□□□□ -1.68
SOD1	YJR104C	SMY1	P32364	656 aa	Known RBP	4.56	□□□□□ -1.68
SOD1	YJR104C	GLC3	P32775	704 aa		4.56	□□□□□ -1.68
SOD1	YJR104C	KIC1	P38692	1080 aa		4.56	□□□□□ -1.68
SOD1	YJR104C	TCB2	P48231	1178 aa		4.56	□□□□□ -1.68
SOD1	YJR104C	GYP5	Q12344	894 aa		4.56	□□□□□ -1.68
SOD1	YJR104C	COX6	P00427	148 aa		4.55	□□□□□ -1.68
SOD1	YJR104C	KIN1	P13185	1064 aa		4.55	□□□□□ -1.68
SOD1	YJR104C	PFF1	P38244	976 aa		4.55	□□□□□ -1.68
SOD1	YJR104C	FET4	P40988	552 aa		4.55	□□□□□ -1.68
SOD1	YJR104C	RCM1	P53972	490 aa		4.55	□□□□□ -1.68
SOD1	YJR104C	YIL177C	P40434	1758 aa		4.55	□□□□□ -1.68
SOD1	YJR104C	YJL225C	P40889	1758 aa		4.55	□□□□□ -1.68
SOD1	YJR104C	APE3	P37302	537 aa	Known RBP	4.54	□□□□□ -1.68
SOD1	YJR104C	ATF2	P53296	535 aa		4.54	□□□□□ -1.68
SOD1	YJR104C	YNR014W	P53719	212 aa		4.54	□□□□□ -1.68
SOD1	YJR104C	CWC15	Q03772	175 aa	Known RBP	4.54	□□□□□ -1.68
SOD1	YJR104C	SAM3	Q08986	587 aa		4.54	□□□□□ -1.68
SOD1	YJR104C	CSR2	Q12734	1121 aa		4.54	□□□□□ -1.68
SOD1	YJR104C	DIT2	P21595	489 aa		4.53	□□□□□ -1.68
SOD1	YJR104C	PPH3	P32345	308 aa		4.53	□□□□□ -1.68
SOD1	YJR104C	RSC30	P38781	883 aa		4.53	□□□□□ -1.68
SOD1	YJR104C	HGH1	P48362	394 aa	Known RBP	4.53	□□□□□ -1.68
SOD1	YJR104C	AIM7	Q12156	149 aa		4.53	□□□□□ -1.68
SOD1	YJR104C	RIM15	P43565	1770 aa		4.53	□□□□□ -1.69
SOD1	YJR104C	MST1	P07236	462 aa		4.52	□□□□□ -1.69
SOD1	YJR104C	YHR131C	P38835	850 aa		4.52	□□□□□ -1.69
SOD1	YJR104C	NUP42	P49686	430 aa	Known RBP	4.52	□□□□□ -1.69
SOD1	YJR104C	ADE16	P54113	591 aa	Known RBP	4.52	□□□□□ -1.69
SOD1	YJR104C	PAH1	P32567	862 aa		4.51	□□□□□ -1.69
SOD1	YJR104C	DCW1	P36091	449 aa		4.51	□□□□□ -1.69
SOD1	YJR104C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
SOD1	YJR104C	YFR016C	P43597	1233 aa	Known RBP	4.51	□□□□□ -1.69
SOD1	YJR104C	RPS0B	P46654	252 aa	Known RBP	4.51	□□□□□ -1.69
SOD1	YJR104C	YGR273C	P53329	174 aa		4.51	□□□□□ -1.69
SOD1	YJR104C	TIM50	Q02776	476 aa		4.51	□□□□□ -1.69
SOD1	YJR104C	RPO41	P13433	1351 aa	Known RBP	4.51	□□□□□ -1.69
SOD1	YJR104C	YKU70	P32807	602 aa		4.5	□□□□□ -1.69
SOD1	YJR104C	RAD54	P32863	898 aa		4.5	□□□□□ -1.69
SOD1	YJR104C	UBP14	P38237	781 aa	Known RBP	4.5	□□□□□ -1.69
SOD1	YJR104C	SET4	P42948	560 aa		4.5	□□□□□ -1.69
SOD1	YJR104C	EMP47	P43555	445 aa		4.5	□□□□□ -1.69
SOD1	YJR104C	MEC3	Q02574	474 aa		4.5	□□□□□ -1.69
SOD1	YJR104C	YLR326W	Q06170	240 aa	Known RBP	4.5	□□□□□ -1.69
SOD1	YJR104C	YOL036W	Q08206	761 aa		4.5	□□□□□ -1.69
SOD1	YJR104C	SEC3	P33332	1336 aa	Known RBP	4.49	□□□□□ -1.69
SOD1	YJR104C	QCR6	P00127	147 aa		4.49	□□□□□ -1.69
SOD1	YJR104C	HTA1	P04911	132 aa	Known RBP	4.49	□□□□□ -1.69
SOD1	YJR104C	HTA2	P04912	132 aa		4.49	□□□□□ -1.69
SOD1	YJR104C	NST1	P53935	1240 aa		4.49	□□□□□ -1.69
SOD1	YJR104C	ERO1	Q03103	563 aa		4.49	□□□□□ -1.69
SOD1	YJR104C	FAB1	P34756	2278 aa		4.49	□□□□□ -1.69
SOD1	YJR104C	RAV1	P47104	1357 aa		4.49	□□□□□ -1.69
SOD1	YJR104C	KEX1	P09620	729 aa		4.48	□□□□□ -1.69
SOD1	YJR104C	CLC1	P17891	233 aa		4.48	□□□□□ -1.69
SOD1	YJR104C	MSM1	P22438	575 aa		4.48	□□□□□ -1.69
SOD1	YJR104C	YDR090C	Q03193	310 aa		4.48	□□□□□ -1.69
SOD1	YJR104C	WSC3	Q12215	556 aa		4.48	□□□□□ -1.69
SOD1	YJR104C	GRX1	P25373	110 aa	Known RBP	4.47	□□□□□ -1.69
SOD1	YJR104C	POL5	P39985	1022 aa	Known RBP	4.47	□□□□□ -1.69
SOD1	YJR104C	FIR1	P40020	876 aa		4.47	□□□□□ -1.69
SOD1	YJR104C	ULP1	Q02724	621 aa		4.47	□□□□□ -1.69
SOD1	YJR104C	FAS2	P19097	1887 aa	Known RBP	4.46	□□□□□ -1.7
SOD1	YJR104C	WHI3	P34761	661 aa	Known RBP	4.46	□□□□□ -1.7
SOD1	YJR104C	RRT6	P53117	311 aa	Predicted RBP	4.46	□□□□□ -1.7
SOD1	YJR104C	PRP43	P53131	767 aa	Known RBP	4.46	□□□□□ -1.7
SOD1	YJR104C	YGR117C	P53270	476 aa		4.46	□□□□□ -1.7
SOD1	YJR104C	SIR4	P11978	1358 aa		4.45	□□□□□ -1.7
SOD1	YJR104C	SOL3	P38858	249 aa		4.45	□□□□□ -1.7
SOD1	YJR104C	PNT1	P38969	423 aa		4.45	□□□□□ -1.7
SOD1	YJR104C	CTI6	Q08923	506 aa		4.45	□□□□□ -1.7
SOD1	YJR104C	AHC1	Q12433	566 aa		4.45	□□□□□ -1.7
SOD1	YJR104C	RPP1B	P10622	106 aa	Known RBP	4.44	□□□□□ -1.7
SOD1	YJR104C	PSE1	P32337	1089 aa	Known RBP	4.44	□□□□□ -1.7
SOD1	YJR104C	EAP1	P36041	632 aa	Known RBP	4.44	□□□□□ -1.7
SOD1	YJR104C	RBA50	Q04418	439 aa		4.44	□□□□□ -1.7
SOD1	YJR104C	SGD1	Q06132	899 aa		4.44	□□□□□ -1.7
SOD1	YJR104C	RLF2	Q12495	606 aa		4.44	□□□□□ -1.7
SOD1	YJR104C	AIM44	Q99299	758 aa		4.44	□□□□□ -1.7
SOD1	YJR104C	LYS2	P07702	1392 aa		4.43	□□□□□ -1.7
SOD1	YJR104C	AI4	P03878	556 aa		4.43	□□□□□ -1.7
SOD1	YJR104C	GUA1	P38625	525 aa	Known RBP	4.43	□□□□□ -1.7
SOD1	YJR104C	YEL023C	P39992	682 aa		4.43	□□□□□ -1.7
SOD1	YJR104C	YLR225C	Q05948	407 aa	Known RBP	4.43	□□□□□ -1.7
SOD1	YJR104C	ECM30	Q06673	1274 aa		4.43	□□□□□ -1.7
SOD1	YJR104C	GRX6	Q12438	231 aa		4.43	□□□□□ -1.7
SOD1	YJR104C	MPH3	P0CE00	602 aa		4.42	□□□□□ -1.7
SOD1	YJR104C	NAP1	P25293	417 aa	Known RBP	4.42	□□□□□ -1.7
SOD1	YJR104C	IME2	P32581	645 aa		4.42	□□□□□ -1.7
SOD1	YJR104C	PRS1	P32895	427 aa	Known RBP	4.42	□□□□□ -1.7
SOD1	YJR104C	KTR4	P38131	464 aa		4.41	□□□□□ -1.7
SOD1	YJR104C	TEA1	P47988	759 aa		4.41	□□□□□ -1.7
SOD1	YJR104C	EAF7	P53911	425 aa	Known RBP	4.41	□□□□□ -1.7
SOD1	YJR104C	IKI3	Q06706	1349 aa	Known RBP	4.41	□□□□□ -1.7
SOD1	YJR104C	LDH1	P38139	375 aa		4.4	□□□□□ -1.71
SOD1	YJR104C	BRL1	P38770	471 aa		4.4	□□□□□ -1.71
SOD1	YJR104C	ORC6	P38826	435 aa		4.4	□□□□□ -1.71
SOD1	YJR104C	VPS62	P53285	467 aa		4.4	□□□□□ -1.71
SOD1	YJR104C	TRM44	Q02648	567 aa	Known RBP	4.4	□□□□□ -1.71
SOD1	YJR104C	YBL029C-A	Q3E756	94 aa		4.4	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms