RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W UTP14Q04500 899 aaKnown RBP3□□□□□ -1.93
CBF2YGR140W SSF2Q12153 453 aaPredicted RBP3□□□□□ -1.93
CBF2YGR140W LSO1Q3E827 93 aa3□□□□□ -1.93
CBF2YGR140W CYT1P07143 309 aa2.99□□□□□ -1.93
CBF2YGR140W GCD11P32481 527 aaKnown RBP2.99□□□□□ -1.93
CBF2YGR140W PTC4P38089 393 aa2.99□□□□□ -1.93
CBF2YGR140W PBP2P38151 413 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
CBF2YGR140W MNN1P39106 762 aa2.99□□□□□ -1.93
CBF2YGR140W RPS26AP39938 119 aaKnown RBP2.99□□□□□ -1.93
CBF2YGR140W RPS26BP39939 119 aaKnown RBP2.99□□□□□ -1.93
CBF2YGR140W SAM37P50110 327 aa2.99□□□□□ -1.93
CBF2YGR140W BDS1Q08347 646 aa2.99□□□□□ -1.93
CBF2YGR140W CBC2Q08920 208 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
CBF2YGR140W SWE1P32944 819 aa2.99□□□□□ -1.93
CBF2YGR140W MNR2P35724 969 aa2.99□□□□□ -1.93
CBF2YGR140W GRX7P38068 203 aa2.99□□□□□ -1.93
CBF2YGR140W TUB4P53378 473 aa2.99□□□□□ -1.93
CBF2YGR140W ERF2Q06551 359 aa2.99□□□□□ -1.93
CBF2YGR140W YPR097WQ06839 1073 aa2.99□□□□□ -1.93
CBF2YGR140W PAT1P25644 796 aaKnown RBP2.98□□□□□ -1.93
CBF2YGR140W ISC10P32645 267 aa2.98□□□□□ -1.93
CBF2YGR140W ATG36P46983 293 aa2.98□□□□□ -1.93
CBF2YGR140W JIP4Q03361 876 aa2.98□□□□□ -1.93
CBF2YGR140W RPN4Q03465 531 aa2.98□□□□□ -1.93
CBF2YGR140W ISR1Q06098 443 aaKnown RBP2.98□□□□□ -1.93
CBF2YGR140W MPC54Q08550 464 aa2.98□□□□□ -1.93
CBF2YGR140W WSC3Q12215 556 aa2.98□□□□□ -1.93
CBF2YGR140W RAM1P22007 431 aa2.98□□□□□ -1.93
CBF2YGR140W VPS35P34110 944 aa2.98□□□□□ -1.93
CBF2YGR140W NTH2P35172 780 aa2.98□□□□□ -1.93
CBF2YGR140W YHL008CP38750 627 aa2.98□□□□□ -1.93
CBF2YGR140W TIM54P47045 478 aa2.98□□□□□ -1.93
CBF2YGR140W PHO4P07270 312 aaKnown RBP2.98□□□□□ -1.93
CBF2YGR140W SUT1P53032 299 aaKnown RBP2.98□□□□□ -1.93
CBF2YGR140W NAN1Q02931 896 aaKnown RBP2.98□□□□□ -1.93
CBF2YGR140W TBS1P38114 1094 aa2.97□□□□□ -1.93
CBF2YGR140W TPM2P40414 161 aa2.97□□□□□ -1.93
CBF2YGR140W TDA5Q06417 326 aaKnown RBP2.97□□□□□ -1.93
CBF2YGR140W BUD21Q08492 214 aaPredicted RBP2.97□□□□□ -1.93
CBF2YGR140W PRE9P23638 258 aaKnown RBP2.97□□□□□ -1.93
CBF2YGR140W BDF2Q07442 638 aa2.97□□□□□ -1.93
CBF2YGR140W NOC3Q07896 663 aaPredicted RBP2.97□□□□□ -1.93
CBF2YGR140W YLR125WQ12138 136 aa2.97□□□□□ -1.93
CBF2YGR140W RPS6AP0CX37 236 aaKnown RBP2.96□□□□□ -1.94
CBF2YGR140W RPS6BP0CX38 236 aaPredicted RBP2.96□□□□□ -1.94
CBF2YGR140W PHO8P11491 566 aa2.96□□□□□ -1.94
CBF2YGR140W RPB10P22139 70 aa2.96□□□□□ -1.94
CBF2YGR140W BOI1P38041 980 aaKnown RBP2.96□□□□□ -1.94
CBF2YGR140W NUP82P40368 713 aa2.96□□□□□ -1.94
CBF2YGR140W DAK2P43550 591 aa2.96□□□□□ -1.94
CBF2YGR140W YGR122WP53272 402 aa2.96□□□□□ -1.94
CBF2YGR140W NMA111P53920 997 aa2.96□□□□□ -1.94
CBF2YGR140W GDE1Q02979 1223 aa2.96□□□□□ -1.94
CBF2YGR140W PML39Q03760 334 aa2.96□□□□□ -1.94
CBF2YGR140W HDA3Q06623 655 aa2.96□□□□□ -1.94
CBF2YGR140W UBP1P25037 809 aa2.96□□□□□ -1.94
CBF2YGR140W IXR1P33417 597 aa2.96□□□□□ -1.94
CBF2YGR140W KRI1P42846 591 aaKnown RBP2.96□□□□□ -1.94
CBF2YGR140W APL6P46682 809 aa2.96□□□□□ -1.94
CBF2YGR140W HUL5P53119 910 aa2.96□□□□□ -1.94
CBF2YGR140W ATG20Q07528 640 aa2.96□□□□□ -1.94
CBF2YGR140W YOL057WQ08225 711 aa2.96□□□□□ -1.94
CBF2YGR140W RPP2BP02400 110 aaKnown RBP2.95□□□□□ -1.94
CBF2YGR140W RAD4P14736 754 aa2.95□□□□□ -1.94
CBF2YGR140W MID1P41821 548 aa2.95□□□□□ -1.94
CBF2YGR140W YJR142WP47173 342 aa2.95□□□□□ -1.94
CBF2YGR140W YPR084WQ06821 456 aa2.95□□□□□ -1.94
CBF2YGR140W GAL11P19659 1081 aa2.95□□□□□ -1.94
CBF2YGR140W SRM1P21827 482 aa2.95□□□□□ -1.94
CBF2YGR140W THI4P32318 326 aa2.95□□□□□ -1.94
CBF2YGR140W UTR2P32623 467 aa2.95□□□□□ -1.94
CBF2YGR140W SMC1P32908 1225 aa2.95□□□□□ -1.94
CBF2YGR140W MRPS18P42847 217 aa2.95□□□□□ -1.94
CBF2YGR140W TRP5P00931 707 aaKnown RBP2.94□□□□□ -1.94
CBF2YGR140W PDC1P06169 563 aaKnown RBP2.94□□□□□ -1.94
CBF2YGR140W RAD2P07276 1031 aa2.94□□□□□ -1.94
CBF2YGR140W PDR1P12383 1068 aa2.94□□□□□ -1.94
CBF2YGR140W DAT1P13483 248 aaKnown RBP2.94□□□□□ -1.94
CBF2YGR140W CYC8P14922 966 aa2.94□□□□□ -1.94
CBF2YGR140W PRI2P20457 528 aa2.94□□□□□ -1.94
CBF2YGR140W YBR197CP38306 217 aa2.94□□□□□ -1.94
CBF2YGR140W HAL5P38970 855 aaKnown RBP2.94□□□□□ -1.94
CBF2YGR140W YEN1P40028 759 aa2.94□□□□□ -1.94
CBF2YGR140W ISM1P48526 1002 aa2.94□□□□□ -1.94
CBF2YGR140W CDC55Q00362 526 aa2.94□□□□□ -1.94
CBF2YGR140W VMS1Q04311 632 aaKnown RBP2.94□□□□□ -1.94
CBF2YGR140W OSH2Q12451 1283 aa2.94□□□□□ -1.94
CBF2YGR140W GRX1P25373 110 aaKnown RBP2.94□□□□□ -1.94
CBF2YGR140W SFP1P32432 683 aa2.94□□□□□ -1.94
CBF2YGR140W NGR1P32831 672 aaKnown RBP2.94□□□□□ -1.94
CBF2YGR140W CRP1P38845 465 aaKnown RBP2.94□□□□□ -1.94
CBF2YGR140W YNL011CP53980 444 aa2.94□□□□□ -1.94
CBF2YGR140W FAL1Q12099 399 aaKnown RBP2.94□□□□□ -1.94
CBF2YGR140W MCD1Q12158 566 aa2.94□□□□□ -1.94
CBF2YGR140W KAR2P16474 682 aaKnown RBP2.94□□□□□ -1.94
CBF2YGR140W KIP2P28743 706 aa2.94□□□□□ -1.94
CBF2YGR140W SUV3P32580 737 aa2.94□□□□□ -1.94
CBF2YGR140W GRX4P32642 244 aa2.94□□□□□ -1.94
CBF2YGR140W GPI13Q07830 1017 aa2.94□□□□□ -1.94
CBF2YGR140W MST1P07236 462 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms