RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W OMA1P36163 345 aa3.88□□□□□ -1.79
SMD1YGR074W INP52P50942 1183 aa3.88□□□□□ -1.79
SMD1YGR074W ALO1P54783 526 aaKnown RBP3.88□□□□□ -1.79
SMD1YGR074W MAK16P10962 306 aaPredicted RBP3.87□□□□□ -1.79
SMD1YGR074W MET1P36150 593 aa3.87□□□□□ -1.79
SMD1YGR074W MSN5P52918 1224 aa3.87□□□□□ -1.79
SMD1YGR074W NAF1P53919 492 aaKnown RBP3.87□□□□□ -1.79
SMD1YGR074W DAT1P13483 248 aaKnown RBP3.86□□□□□ -1.79
SMD1YGR074W FRA1Q07825 749 aa3.86□□□□□ -1.79
SMD1YGR074W GPM1P00950 247 aaKnown RBP3.85□□□□□ -1.79
SMD1YGR074W AHP1P38013 176 aaKnown RBP3.85□□□□□ -1.79
SMD1YGR074W TBS1P38114 1094 aa3.84□□□□□ -1.79
SMD1YGR074W AVT1P47082 602 aa3.84□□□□□ -1.79
SMD1YGR074W MRX12P47084 519 aa3.84□□□□□ -1.79
SMD1YGR074W WTM2Q12206 467 aa3.84□□□□□ -1.79
SMD1YGR074W RLF2Q12495 606 aa3.84□□□□□ -1.79
SMD1YGR074W SSN3P39073 555 aa3.83□□□□□ -1.8
SMD1YGR074W ALA1P40825 983 aaKnown RBP3.83□□□□□ -1.8
SMD1YGR074W UTR2P32623 467 aa3.82□□□□□ -1.8
SMD1YGR074W SLA1P32790 1244 aa3.82□□□□□ -1.8
SMD1YGR074W ISR1Q06098 443 aaKnown RBP3.82□□□□□ -1.8
SMD1YGR074W SPT2P06843 333 aaPredicted RBP3.81□□□□□ -1.8
SMD1YGR074W FPS1P23900 669 aa3.81□□□□□ -1.8
SMD1YGR074W CSE4P36012 229 aa3.81□□□□□ -1.8
SMD1YGR074W AOS1Q06624 347 aa3.81□□□□□ -1.8
SMD1YGR074W EMP47P43555 445 aa3.8□□□□□ -1.8
SMD1YGR074W GUA1P38625 525 aaKnown RBP3.79□□□□□ -1.8
SMD1YGR074W BRL1P38770 471 aa3.79□□□□□ -1.8
SMD1YGR074W UTP7P40055 554 aaKnown RBP3.79□□□□□ -1.8
SMD1YGR074W GIS1Q03833 894 aa3.78□□□□□ -1.8
SMD1YGR074W TY1A-DR3Q12441 440 aa3.78□□□□□ -1.8
SMD1YGR074W SPT5P27692 1063 aaKnown RBP3.77□□□□□ -1.81
SMD1YGR074W KNS1P32350 737 aaPredicted RBP3.77□□□□□ -1.81
SMD1YGR074W IRE1P32361 1115 aa3.77□□□□□ -1.81
SMD1YGR074W ISF1P32488 338 aa3.77□□□□□ -1.81
SMD1YGR074W ATG3P40344 310 aa3.77□□□□□ -1.81
SMD1YGR074W SUM1P46676 1062 aa3.77□□□□□ -1.81
SMD1YGR074W PRY1P47032 299 aa3.77□□□□□ -1.81
SMD1YGR074W HPC2Q01448 625 aa3.77□□□□□ -1.81
SMD1YGR074W JJJ2P46997 583 aa3.76□□□□□ -1.81
SMD1YGR074W MCM16Q12262 181 aa3.76□□□□□ -1.81
SMD1YGR074W MRPL16P38064 232 aa3.75□□□□□ -1.81
SMD1YGR074W APL6P46682 809 aa3.75□□□□□ -1.81
SMD1YGR074W RPP1AP05318 106 aaPredicted RBP3.74□□□□□ -1.81
SMD1YGR074W ELM1P32801 640 aa3.74□□□□□ -1.81
SMD1YGR074W YBL036CP38197 257 aa3.74□□□□□ -1.81
SMD1YGR074W TFB3Q03290 321 aa3.74□□□□□ -1.81
SMD1YGR074W UTP13Q05946 817 aaKnown RBP3.74□□□□□ -1.81
SMD1YGR074W PDC5P16467 563 aaKnown RBP3.73□□□□□ -1.81
SMD1YGR074W SLX8P40072 274 aa3.73□□□□□ -1.81
SMD1YGR074W YPP1P46951 817 aa3.73□□□□□ -1.81
SMD1YGR074W HDA3Q06623 655 aa3.73□□□□□ -1.81
SMD1YGR074W SOH1P38633 127 aa3.72□□□□□ -1.81
SMD1YGR074W HAL5P38970 855 aaKnown RBP3.72□□□□□ -1.81
SMD1YGR074W STB3Q12427 513 aa3.72□□□□□ -1.81
SMD1YGR074W YDJ1P25491 409 aaKnown RBP3.71□□□□□ -1.82
SMD1YGR074W PDC6P26263 563 aaKnown RBP3.71□□□□□ -1.82
SMD1YGR074W RPL34BP40525 121 aaKnown RBP3.71□□□□□ -1.82
SMD1YGR074W SPR3P41901 512 aa3.71□□□□□ -1.82
SMD1YGR074W PSH1Q12161 406 aa3.71□□□□□ -1.82
SMD1YGR074W SHM1P37292 490 aaPredicted RBP3.7□□□□□ -1.82
SMD1YGR074W YJL007CP47080 104 aa3.7□□□□□ -1.82
SMD1YGR074W TPS3P38426 1054 aaKnown RBP3.69□□□□□ -1.82
SMD1YGR074W YTA6P40328 754 aa3.68□□□□□ -1.82
SMD1YGR074W TY1A-DR2Q03964 440 aaKnown RBP3.68□□□□□ -1.82
SMD1YGR074W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
SMD1YGR074W PKC1P24583 1151 aa3.67□□□□□ -1.82
SMD1YGR074W BIM1P40013 344 aa3.67□□□□□ -1.82
SMD1YGR074W RPS31P05759 152 aaKnown RBP3.66□□□□□ -1.82
SMD1YGR074W LEU1P07264 779 aaKnown RBP3.66□□□□□ -1.82
SMD1YGR074W SWI5P08153 709 aa3.66□□□□□ -1.82
SMD1YGR074W YFL034WP43564 1073 aa3.66□□□□□ -1.82
SMD1YGR074W PGM1P33401 570 aaKnown RBP3.65□□□□□ -1.83
SMD1YGR074W AIM9P40053 627 aaKnown RBP3.65□□□□□ -1.83
SMD1YGR074W YPQ2Q06328 317 aa3.65□□□□□ -1.83
SMD1YGR074W MED7Q08278 222 aa3.65□□□□□ -1.83
SMD1YGR074W NHA1Q99271 985 aa3.65□□□□□ -1.83
SMD1YGR074W RGP1P16664 663 aa3.64□□□□□ -1.83
SMD1YGR074W NAB2P32505 525 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SMD1YGR074W HEH2Q03281 663 aa3.64□□□□□ -1.83
SMD1YGR074W MCM1P11746 286 aa3.63□□□□□ -1.83
SMD1YGR074W SUP45P12385 437 aaKnown RBP3.63□□□□□ -1.83
SMD1YGR074W SSA4P22202 642 aaKnown RBP3.63□□□□□ -1.83
SMD1YGR074W LIP5P32875 414 aa3.63□□□□□ -1.83
SMD1YGR074W ALG14P38242 237 aa3.63□□□□□ -1.83
SMD1YGR074W BUD9P53226 547 aa3.63□□□□□ -1.83
SMD1YGR074W YNL108CP53929 270 aa3.63□□□□□ -1.83
SMD1YGR074W RPS6AP0CX37 236 aaKnown RBP3.62□□□□□ -1.83
SMD1YGR074W RPS6BP0CX38 236 aaPredicted RBP3.62□□□□□ -1.83
SMD1YGR074W TIF1P10081 395 aaKnown RBP3.62□□□□□ -1.83
SMD1YGR074W RTG2P32608 588 aaKnown RBP3.62□□□□□ -1.83
SMD1YGR074W PGM2P37012 569 aaKnown RBP3.62□□□□□ -1.83
SMD1YGR074W MSC7P38694 644 aa3.62□□□□□ -1.83
SMD1YGR074W UBP5P39944 805 aa3.62□□□□□ -1.83
SMD1YGR074W ATG32P40458 529 aa3.62□□□□□ -1.83
SMD1YGR074W ENO2P00925 437 aaKnown RBP3.61□□□□□ -1.83
SMD1YGR074W SSA1P10591 642 aaKnown RBP3.61□□□□□ -1.83
SMD1YGR074W NTH2P35172 780 aa3.61□□□□□ -1.83
SMD1YGR074W YKR073CP36153 106 aa3.61□□□□□ -1.83
SMD1YGR074W ALD2P47771 506 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms