RNA–Protein interactions for RNA: YGL009C

LEU1, Transcript of Isopropylmalate isomerase, yeast

Gene LEU1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEU1	YGL009C	TPM2	P40414	161 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	TBF1	Q02457	562 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	PHO4	P07270	312 aa	Known RBP	5.73	□□□□□ -1.49
LEU1	YGL009C	KEX2	P13134	814 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	TEC1	P18412	486 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	TSR4	P25040	408 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	GUT2	P32191	649 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	SOH1	P38633	127 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	BOI2	P39969	1040 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	YEL023C	P39992	682 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	MAD1	P40957	749 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	SET4	P42948	560 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	SPR28	Q04921	423 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	ERF2	Q06551	359 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	GPI13	Q07830	1017 aa		5.73	□□□□□ -1.49
LEU1	YGL009C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
LEU1	YGL009C	VMA4	P22203	233 aa	Known RBP	5.72	□□□□□ -1.49
LEU1	YGL009C	VAN1	P23642	535 aa		5.72	□□□□□ -1.49
LEU1	YGL009C	MCM2	P29469	868 aa		5.72	□□□□□ -1.49
LEU1	YGL009C	POL5	P39985	1022 aa	Known RBP	5.72	□□□□□ -1.49
LEU1	YGL009C	FIG4	P42837	879 aa		5.72	□□□□□ -1.49
LEU1	YGL009C	NFU1	P32860	256 aa		5.71	□□□□□ -1.49
LEU1	YGL009C	HOS4	P40480	1083 aa		5.71	□□□□□ -1.49
LEU1	YGL009C	MEH1	Q02205	184 aa		5.71	□□□□□ -1.49
LEU1	YGL009C	TRS120	Q04183	1289 aa		5.71	□□□□□ -1.49
LEU1	YGL009C	CLN2	P20438	545 aa		5.71	□□□□□ -1.5
LEU1	YGL009C	SPR3	P41901	512 aa		5.71	□□□□□ -1.5
LEU1	YGL009C	TUB4	P53378	473 aa		5.71	□□□□□ -1.5
LEU1	YGL009C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
LEU1	YGL009C	YOL057W	Q08225	711 aa		5.71	□□□□□ -1.5
LEU1	YGL009C	YDL206W	Q12424	762 aa		5.71	□□□□□ -1.5
LEU1	YGL009C	TRS33	Q99394	268 aa		5.71	□□□□□ -1.5
LEU1	YGL009C	CHD1	P32657	1468 aa		5.71	□□□□□ -1.5
LEU1	YGL009C	SUV3	P32580	737 aa		5.7	□□□□□ -1.5
LEU1	YGL009C	BOI1	P38041	980 aa	Known RBP	5.7	□□□□□ -1.5
LEU1	YGL009C	ERP2	P39704	215 aa		5.7	□□□□□ -1.5
LEU1	YGL009C	GTT3	P39996	337 aa		5.7	□□□□□ -1.5
LEU1	YGL009C	POB3	Q04636	552 aa	Known RBP	5.7	□□□□□ -1.5
LEU1	YGL009C	SSB1	P11484	613 aa	Known RBP	5.7	□□□□□ -1.5
LEU1	YGL009C	PDI1	P17967	522 aa	Known RBP	5.7	□□□□□ -1.5
LEU1	YGL009C	RPT1	P33299	467 aa	Known RBP	5.7	□□□□□ -1.5
LEU1	YGL009C	SSB2	P40150	613 aa	Known RBP	5.7	□□□□□ -1.5
LEU1	YGL009C	SVL3	Q03088	825 aa	Known RBP	5.7	□□□□□ -1.5
LEU1	YGL009C	DPL1	Q05567	589 aa		5.7	□□□□□ -1.5
LEU1	YGL009C	THO2	P53552	1597 aa	Known RBP	5.7	□□□□□ -1.5
LEU1	YGL009C	SPT2	P06843	333 aa	Predicted RBP	5.69	□□□□□ -1.5
LEU1	YGL009C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
LEU1	YGL009C	WRS1	Q12109	432 aa	Known RBP	5.69	□□□□□ -1.5
LEU1	YGL009C	DAK2	P43550	591 aa		5.69	□□□□□ -1.5
LEU1	YGL009C	RPA14	P50106	137 aa		5.69	□□□□□ -1.5
LEU1	YGL009C	MSB4	Q12317	492 aa		5.69	□□□□□ -1.5
LEU1	YGL009C	RTT106	P40161	455 aa		5.68	□□□□□ -1.5
LEU1	YGL009C	DNM1	P54861	757 aa		5.68	□□□□□ -1.5
LEU1	YGL009C	AGE1	Q04412	482 aa		5.68	□□□□□ -1.5
LEU1	YGL009C	BDF2	Q07442	638 aa		5.68	□□□□□ -1.5
LEU1	YGL009C	SIN3	P22579	1536 aa		5.68	□□□□□ -1.5
LEU1	YGL009C	UBP1	P25037	809 aa		5.68	□□□□□ -1.5
LEU1	YGL009C	NUD1	P32336	851 aa		5.68	□□□□□ -1.5
LEU1	YGL009C	GRX4	P32642	244 aa		5.68	□□□□□ -1.5
LEU1	YGL009C	PTC4	P38089	393 aa		5.68	□□□□□ -1.5
LEU1	YGL009C	YPR097W	Q06839	1073 aa		5.68	□□□□□ -1.5
LEU1	YGL009C	HIR3	P47171	1648 aa		5.68	□□□□□ -1.5
LEU1	YGL009C	NMD3	P38861	518 aa	Known RBP	5.67	□□□□□ -1.5
LEU1	YGL009C	ESF1	Q06344	628 aa	Known RBP	5.67	□□□□□ -1.5
LEU1	YGL009C	CDC53	Q12018	815 aa	Known RBP	5.67	□□□□□ -1.5
LEU1	YGL009C	MNR2	P35724	969 aa		5.66	□□□□□ -1.5
LEU1	YGL009C	TAT2	P38967	592 aa		5.66	□□□□□ -1.5
LEU1	YGL009C	YGL081W	P53156	320 aa		5.66	□□□□□ -1.5
LEU1	YGL009C	PKH1	Q03407	766 aa		5.66	□□□□□ -1.5
LEU1	YGL009C	ECM16	Q04217	1267 aa	Known RBP	5.66	□□□□□ -1.5
LEU1	YGL009C	MPC54	Q08550	464 aa		5.66	□□□□□ -1.5
LEU1	YGL009C	BUD31	P25337	157 aa	Predicted RBP	5.66	□□□□□ -1.5
LEU1	YGL009C	FAF1	P40546	346 aa	Predicted RBP	5.66	□□□□□ -1.5
LEU1	YGL009C	TMA64	Q04600	565 aa	Known RBP	5.66	□□□□□ -1.5
LEU1	YGL009C	ISU2	Q12056	156 aa		5.66	□□□□□ -1.5
LEU1	YGL009C	APC11	Q12157	165 aa		5.66	□□□□□ -1.5
LEU1	YGL009C	HAL5	P38970	855 aa	Known RBP	5.65	□□□□□ -1.5
LEU1	YGL009C	YFL034W	P43564	1073 aa		5.65	□□□□□ -1.5
LEU1	YGL009C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.65	□□□□□ -1.5	not detected
LEU1	YGL009C	SNU66	Q12420	587 aa	Predicted RBP	5.65	□□□□□ -1.5
LEU1	YGL009C	GCD6	P32501	712 aa	Known RBP	5.65	□□□□□ -1.51
LEU1	YGL009C	RPS26A	P39938	119 aa	Known RBP	5.65	□□□□□ -1.51
LEU1	YGL009C	RPS26B	P39939	119 aa	Known RBP	5.65	□□□□□ -1.51
LEU1	YGL009C	GDE1	Q02979	1223 aa		5.65	□□□□□ -1.51
LEU1	YGL009C	XRN1	P22147	1528 aa	Known RBP	5.64	□□□□□ -1.51
LEU1	YGL009C	TY1B-A	O13527	1196 aa	Known RBP	5.64	□□□□□ -1.51
LEU1	YGL009C	PWP2	P25635	923 aa	Known RBP	5.64	□□□□□ -1.51
LEU1	YGL009C	VPS27	P40343	622 aa	Known RBP	5.64	□□□□□ -1.51
LEU1	YGL009C	NOP2	P40991	618 aa	Known RBP	5.64	□□□□□ -1.51
LEU1	YGL009C	MTO1	P53070	669 aa		5.64	□□□□□ -1.51
LEU1	YGL009C	YOR131C	Q12486	218 aa		5.64	□□□□□ -1.51
LEU1	YGL009C	VPS35	P34110	944 aa		5.64	□□□□□ -1.51
LEU1	YGL009C	MNN1	P39106	762 aa		5.64	□□□□□ -1.51
LEU1	YGL009C	NOC2	P39744	710 aa	Known RBP	5.64	□□□□□ -1.51
LEU1	YGL009C	AIM9	P40053	627 aa	Known RBP	5.64	□□□□□ -1.51
LEU1	YGL009C	YGR122W	P53272	402 aa		5.64	□□□□□ -1.51
LEU1	YGL009C	UFD2	P54860	961 aa		5.64	□□□□□ -1.51
LEU1	YGL009C	COG4	Q06096	861 aa		5.64	□□□□□ -1.51
LEU1	YGL009C	ALR1	Q08269	859 aa		5.64	□□□□□ -1.51
LEU1	YGL009C	CYC8	P14922	966 aa		5.63	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms