RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W HAL5P38970 855 aaKnown RBP5.43□□□□□ -1.54
UBP6YFR010W MET10P39692 1035 aa5.43□□□□□ -1.54
UBP6YFR010W YJR098CP47139 656 aa5.43□□□□□ -1.54
UBP6YFR010W RTS3P53289 263 aa5.43□□□□□ -1.54
UBP6YFR010W DOS2P54858 310 aa5.43□□□□□ -1.54
UBP6YFR010W SIS2P36024 562 aa5.42□□□□□ -1.54
UBP6YFR010W SPC42P36094 363 aa5.42□□□□□ -1.54
UBP6YFR010W RDS2P19541 446 aaKnown RBP5.41□□□□□ -1.54
UBP6YFR010W SOH1P38633 127 aa5.41□□□□□ -1.54
UBP6YFR010W ATG3P40344 310 aa5.41□□□□□ -1.54
UBP6YFR010W RPL34BP40525 121 aaKnown RBP5.41□□□□□ -1.54
UBP6YFR010W SUB2Q07478 446 aaKnown RBP5.41□□□□□ -1.54
UBP6YFR010W TY1A-BLQ12266 440 aa5.41□□□□□ -1.54
UBP6YFR010W UTP13Q05946 817 aaKnown RBP5.4□□□□□ -1.54
UBP6YFR010W TCB1Q12466 1186 aa5.4□□□□□ -1.54
UBP6YFR010W ENO1P00924 437 aaKnown RBP5.39□□□□□ -1.55
UBP6YFR010W RTG2P32608 588 aaKnown RBP5.39□□□□□ -1.55
UBP6YFR010W SLD2P34252 453 aa5.39□□□□□ -1.55
UBP6YFR010W MRX10Q05648 414 aa5.39□□□□□ -1.55
UBP6YFR010W SPT2P06843 333 aaPredicted RBP5.38□□□□□ -1.55
UBP6YFR010W UTR2P32623 467 aa5.38□□□□□ -1.55
UBP6YFR010W TPO2P53283 614 aa5.38□□□□□ -1.55
UBP6YFR010W UBP2Q01476 1272 aa5.38□□□□□ -1.55
UBP6YFR010W RPP2BP02400 110 aaKnown RBP5.38□□□□□ -1.55
UBP6YFR010W DLD3P39976 496 aaKnown RBP5.38□□□□□ -1.55
UBP6YFR010W OSW7P43611 510 aa5.38□□□□□ -1.55
UBP6YFR010W WTM2Q12206 467 aa5.38□□□□□ -1.55
UBP6YFR010W SSF1P38789 453 aaPredicted RBP5.37□□□□□ -1.55
UBP6YFR010W YJR008WP47085 338 aa5.37□□□□□ -1.55
UBP6YFR010W HDA3Q06623 655 aa5.36□□□□□ -1.55
UBP6YFR010W YPR204WQ08995 1032 aa5.36□□□□□ -1.55
UBP6YFR010W SSA4P22202 642 aaKnown RBP5.35□□□□□ -1.55
UBP6YFR010W DAT1P13483 248 aaKnown RBP5.34□□□□□ -1.55
UBP6YFR010W RRN6P32786 894 aa5.34□□□□□ -1.55
UBP6YFR010W OCA5P38738 679 aa5.34□□□□□ -1.55
UBP6YFR010W ICP55P40051 511 aa5.34□□□□□ -1.55
UBP6YFR010W RPS0BP46654 252 aaKnown RBP5.34□□□□□ -1.55
UBP6YFR010W VTC4P47075 721 aa5.34□□□□□ -1.55
UBP6YFR010W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
UBP6YFR010W TBS1P38114 1094 aa5.33□□□□□ -1.56
UBP6YFR010W PEP12P32854 288 aa5.33□□□□□ -1.56
UBP6YFR010W OSH7P38755 437 aa5.33□□□□□ -1.56
UBP6YFR010W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
UBP6YFR010W BUD21Q08492 214 aaPredicted RBP5.33□□□□□ -1.56
UBP6YFR010W PUS1Q12211 544 aaKnown RBP5.33□□□□□ -1.56
UBP6YFR010W CDC19P00549 500 aaKnown RBP5.32□□□□□ -1.56
UBP6YFR010W AIM9P40053 627 aaKnown RBP5.32□□□□□ -1.56
UBP6YFR010W UTP7P40055 554 aaKnown RBP5.32□□□□□ -1.56
UBP6YFR010W ROG3P43602 733 aa5.32□□□□□ -1.56
UBP6YFR010W DAL1P32375 460 aa5.31□□□□□ -1.56
UBP6YFR010W SSN3P39073 555 aa5.31□□□□□ -1.56
UBP6YFR010W LSB3P43603 459 aaKnown RBP5.31□□□□□ -1.56
UBP6YFR010W MSN5P52918 1224 aa5.31□□□□□ -1.56
UBP6YFR010W NAB3P38996 802 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
UBP6YFR010W SUM1P46676 1062 aa5.3□□□□□ -1.56
UBP6YFR010W TY1A-MR1Q04215 440 aa5.3□□□□□ -1.56
UBP6YFR010W TY1A-DR3Q12441 440 aa5.3□□□□□ -1.56
UBP6YFR010W CCP1P00431 361 aa5.29□□□□□ -1.56
UBP6YFR010W SWI5P08153 709 aa5.29□□□□□ -1.56
UBP6YFR010W HEM3P28789 327 aa5.29□□□□□ -1.56
UBP6YFR010W YAF9P53930 226 aa5.29□□□□□ -1.56
UBP6YFR010W RPL34AP87262 121 aaPredicted RBP5.29□□□□□ -1.56
UBP6YFR010W NAM8Q00539 523 aaKnown RBP5.29□□□□□ -1.56
UBP6YFR010W FPR4Q06205 392 aaPredicted RBP5.29□□□□□ -1.56
UBP6YFR010W SLA1P32790 1244 aa5.28□□□□□ -1.56
UBP6YFR010W KTR7P40504 517 aa5.28□□□□□ -1.56
UBP6YFR010W DPH6Q12429 685 aa5.28□□□□□ -1.56
UBP6YFR010W PDI1P17967 522 aaKnown RBP5.28□□□□□ -1.56
UBP6YFR010W SEN54Q02825 467 aaPredicted RBP5.28□□□□□ -1.56
UBP6YFR010W RPS6AP0CX37 236 aaKnown RBP5.27□□□□□ -1.57
UBP6YFR010W RPS6BP0CX38 236 aaPredicted RBP5.27□□□□□ -1.57
UBP6YFR010W AHP1P38013 176 aaKnown RBP5.27□□□□□ -1.57
UBP6YFR010W NMD2P38798 1089 aaKnown RBP5.27□□□□□ -1.57
UBP6YFR010W YFL034WP43564 1073 aa5.27□□□□□ -1.57
UBP6YFR010W YPQ2Q06328 317 aa5.27□□□□□ -1.57
UBP6YFR010W TSC13Q99190 310 aa5.27□□□□□ -1.57
UBP6YFR010W TOA1P32773 286 aa5.26□□□□□ -1.57
UBP6YFR010W ALA1P40825 983 aaKnown RBP5.26□□□□□ -1.57
UBP6YFR010W ALD4P46367 519 aaKnown RBP5.26□□□□□ -1.57
UBP6YFR010W JJJ2P46997 583 aa5.26□□□□□ -1.57
UBP6YFR010W UBP15P50101 1230 aa5.26□□□□□ -1.57
UBP6YFR010W UBX5Q06682 500 aa5.26□□□□□ -1.57
UBP6YFR010W CDC3P32457 520 aaKnown RBP5.25□□□□□ -1.57
UBP6YFR010W MDJ1P35191 511 aa5.25□□□□□ -1.57
UBP6YFR010W TTI1P36097 1038 aa5.25□□□□□ -1.57
UBP6YFR010W ACS2P52910 683 aaKnown RBP5.25□□□□□ -1.57
UBP6YFR010W PHM7Q12252 991 aa5.25□□□□□ -1.57
UBP6YFR010W PHO87P25360 923 aa5.24□□□□□ -1.57
UBP6YFR010W NTH2P35172 780 aa5.24□□□□□ -1.57
UBP6YFR010W SHM1P37292 490 aaPredicted RBP5.24□□□□□ -1.57
UBP6YFR010W ZDS1P50111 915 aaKnown RBP5.24□□□□□ -1.57
UBP6YFR010W CWC22P53333 577 aaKnown RBP5.24□□□□□ -1.57
UBP6YFR010W HIF1Q12373 385 aa5.24□□□□□ -1.57
UBP6YFR010W LYS5P50113 272 aa5.23□□□□□ -1.57
UBP6YFR010W TGL4P36165 910 aa5.23□□□□□ -1.57
UBP6YFR010W CUZ1P53899 274 aa5.23□□□□□ -1.57
UBP6YFR010W CYT1P07143 309 aa5.22□□□□□ -1.57
UBP6YFR010W GAL2P13181 574 aa5.22□□□□□ -1.57
UBP6YFR010W HAP4P14064 554 aa5.22□□□□□ -1.57
UBP6YFR010W CPS1P27614 576 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 97.6 ms