RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C ATG13Q06628 738 aa7.71□□□□□ -1.18
YPT1YFL038C KNS1P32350 737 aaPredicted RBP7.7□□□□□ -1.18
YPT1YFL038C NPA3P47122 385 aa7.7□□□□□ -1.18
YPT1YFL038C SSP2Q08646 371 aa7.7□□□□□ -1.18
YPT1YFL038C HST1P53685 503 aa7.69□□□□□ -1.18
YPT1YFL038C VPS20Q04272 221 aa7.69□□□□□ -1.18
YPT1YFL038C BRE1Q07457 700 aaKnown RBP7.69□□□□□ -1.18
YPT1YFL038C ISW2Q08773 1120 aa7.69□□□□□ -1.18
YPT1YFL038C NOP53Q12080 455 aaKnown RBP7.69□□□□□ -1.18
YPT1YFL038C AAP1P37898 856 aaKnown RBP7.68□□□□□ -1.18
YPT1YFL038C HYR1P40581 163 aaKnown RBP7.68□□□□□ -1.18
YPT1YFL038C YGL242CP53066 181 aa7.68□□□□□ -1.18
YPT1YFL038C MLC1P53141 149 aa7.68□□□□□ -1.18
YPT1YFL038C FRK1Q03002 865 aaPredicted RBP7.68□□□□□ -1.18
YPT1YFL038C VPS64Q03944 604 aa7.68□□□□□ -1.18
YPT1YFL038C YLR271WQ06152 274 aa7.68□□□□□ -1.18
YPT1YFL038C FPR4Q06205 392 aaPredicted RBP7.68□□□□□ -1.18
YPT1YFL038C ENV9Q08651 330 aa7.68□□□□□ -1.18
YPT1YFL038C YPR204WQ08995 1032 aa7.68□□□□□ -1.18
YPT1YFL038C RIM20Q12033 661 aa7.68□□□□□ -1.18
YPT1YFL038C PDR18P53756 1333 aa7.68□□□□□ -1.18
YPT1YFL038C MRPS35P53292 345 aa7.67□□□□□ -1.18
YPT1YFL038C HRQ1Q05549 1077 aa7.67□□□□□ -1.18
YPT1YFL038C BIK1P11709 440 aa7.66□□□□□ -1.18
YPT1YFL038C APL2P36000 726 aaPredicted RBP7.66□□□□□ -1.18
YPT1YFL038C CIR1P42940 261 aa7.66□□□□□ -1.18
YPT1YFL038C PIL1P53252 339 aaKnown RBP7.66□□□□□ -1.18
YPT1YFL038C MDG1P53885 366 aa7.66□□□□□ -1.18
YPT1YFL038C ALO1P54783 526 aaKnown RBP7.66□□□□□ -1.18
YPT1YFL038C MTC5Q03897 1148 aa7.66□□□□□ -1.18
YPT1YFL038C TUM1Q08686 304 aaKnown RBP7.66□□□□□ -1.18
YPT1YFL038C PHM7Q12252 991 aa7.66□□□□□ -1.18
YPT1YFL038C ARG8P18544 423 aa7.65□□□□□ -1.18
YPT1YFL038C RPG1P38249 964 aaKnown RBP7.65□□□□□ -1.18
YPT1YFL038C AIM44Q99299 758 aa7.65□□□□□ -1.18
YPT1YFL038C DUR1,2P32528 1835 aaKnown RBP7.64□□□□□ -1.19
YPT1YFL038C SUP35P05453 685 aaKnown RBP7.64□□□□□ -1.19
YPT1YFL038C KTR1P27810 393 aaKnown RBP7.64□□□□□ -1.19
YPT1YFL038C KTR3P38130 404 aaPredicted RBP7.64□□□□□ -1.19
YPT1YFL038C AIM9P40053 627 aaKnown RBP7.64□□□□□ -1.19
YPT1YFL038C KRE33P53914 1056 aaKnown RBP7.64□□□□□ -1.19
YPT1YFL038C RMD1Q03441 430 aa7.64□□□□□ -1.19
YPT1YFL038C LCD1Q04377 747 aa7.64□□□□□ -1.19
YPT1YFL038C YAH1Q12184 172 aaKnown RBP7.64□□□□□ -1.19
YPT1YFL038C KEX1P09620 729 aa7.63□□□□□ -1.19
YPT1YFL038C GRX1P25373 110 aaKnown RBP7.63□□□□□ -1.19
YPT1YFL038C RSM25P40496 264 aa7.63□□□□□ -1.19
YPT1YFL038C SPO22P40511 975 aa7.63□□□□□ -1.19
YPT1YFL038C HXT10P43581 546 aa7.63□□□□□ -1.19
YPT1YFL038C PSH1Q12161 406 aa7.63□□□□□ -1.19
YPT1YFL038C RPN12P32496 274 aa7.62□□□□□ -1.19
YPT1YFL038C CAB3P36076 571 aa7.62□□□□□ -1.19
YPT1YFL038C RSC1P53236 928 aa7.62□□□□□ -1.19
YPT1YFL038C GYP5Q12344 894 aa7.62□□□□□ -1.19
YPT1YFL038C DCD1P06773 312 aa7.61□□□□□ -1.19
YPT1YFL038C RPL19AP0CX82 189 aaKnown RBP7.61□□□□□ -1.19
YPT1YFL038C RPL19BP0CX83 189 aaPredicted RBP7.61□□□□□ -1.19
YPT1YFL038C TPM1P17536 199 aaKnown RBP7.61□□□□□ -1.19
YPT1YFL038C ELM1P32801 640 aa7.61□□□□□ -1.19
YPT1YFL038C RKM3P38222 552 aa7.61□□□□□ -1.19
YPT1YFL038C RVS167P39743 482 aaKnown RBP7.61□□□□□ -1.19
YPT1YFL038C APP1P53933 587 aa7.61□□□□□ -1.19
YPT1YFL038C PKH1Q03407 766 aa7.61□□□□□ -1.19
YPT1YFL038C IMH1Q06704 911 aaKnown RBP7.61□□□□□ -1.19
YPT1YFL038C TSR3Q12094 313 aaKnown RBP7.61□□□□□ -1.19
YPT1YFL038C COBP00163 385 aa7.6□□□□□ -1.19
YPT1YFL038C OSH3P38713 996 aaKnown RBP7.6□□□□□ -1.19
YPT1YFL038C KRI1P42846 591 aaKnown RBP7.6□□□□□ -1.19
YPT1YFL038C STM1P39015 273 aaKnown RBP7.59□□□□□ -1.19
YPT1YFL038C DOT5P40553 215 aa7.59□□□□□ -1.19
YPT1YFL038C YGL081WP53156 320 aa7.59□□□□□ -1.19
YPT1YFL038C PIB2P53191 635 aa7.59□□□□□ -1.19
YPT1YFL038C FCP1Q03254 732 aa7.59□□□□□ -1.19
YPT1YFL038C SAC3P46674 1301 aa7.58□□□□□ -1.2
YPT1YFL038C TTI1P36097 1038 aa7.58□□□□□ -1.2
YPT1YFL038C YKR075CP36155 307 aa7.58□□□□□ -1.2
YPT1YFL038C EPS1P40557 701 aa7.58□□□□□ -1.2
YPT1YFL038C FOX2Q02207 900 aaKnown RBP7.58□□□□□ -1.2
YPT1YFL038C PEX19Q07418 342 aa7.58□□□□□ -1.2
YPT1YFL038C PSK2Q08217 1101 aa7.58□□□□□ -1.2
YPT1YFL038C APC11Q12157 165 aa7.58□□□□□ -1.2
YPT1YFL038C SNU66Q12420 587 aaPredicted RBP7.58□□□□□ -1.2
YPT1YFL038C SEC18P18759 758 aaKnown RBP7.57□□□□□ -1.2
YPT1YFL038C OPI1P21957 404 aa7.57□□□□□ -1.2
YPT1YFL038C PEX14P53112 341 aa7.57□□□□□ -1.2
YPT1YFL038C ETT1Q08421 412 aaKnown RBP7.57□□□□□ -1.2
YPT1YFL038C SSK22P25390 1331 aaPredicted RBP7.56□□□□□ -1.2
YPT1YFL038C AI2P03876 854 aa7.56□□□□□ -1.2
YPT1YFL038C TAF13P11747 167 aa7.56□□□□□ -1.2
YPT1YFL038C SLA1P32790 1244 aa7.56□□□□□ -1.2
YPT1YFL038C PRX1P34227 261 aaKnown RBP7.56□□□□□ -1.2
YPT1YFL038C CCT5P40413 562 aaKnown RBP7.56□□□□□ -1.2
YPT1YFL038C TCB2P48231 1178 aa7.56□□□□□ -1.2
YPT1YFL038C CTF18P49956 741 aa7.56□□□□□ -1.2
YPT1YFL038C CTR9P89105 1077 aa7.56□□□□□ -1.2
YPT1YFL038C UBP16Q02863 499 aa7.56□□□□□ -1.2
YPT1YFL038C YPL150WQ12152 901 aa7.56□□□□□ -1.2
YPT1YFL038C MBR1P23493 339 aa7.55□□□□□ -1.2
YPT1YFL038C PBY1P38254 753 aa7.55□□□□□ -1.2
YPT1YFL038C CWH41P53008 833 aa7.55□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms