RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	TY1A-PR2	P0CX60	440 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	TY1A-DR5	P0CX65	440 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	TY1A-ER2	P0CX66	440 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	TY1A-GR3	P0CX67	440 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	TY1A-LR1	P0CX68	440 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	TY1A-MR2	P0CX69	440 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	6.37	□□□□□ -1.39	not detected
UBC8	YEL012W	TY1A-JR2	P47099	440 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	TY1A-DR1	Q03856	440 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	AGE1	Q04412	482 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	TY1A-ML1	Q04706	440 aa	Known RBP	6.37	□□□□□ -1.39
UBC8	YEL012W	BUD21	Q08492	214 aa	Predicted RBP	6.37	□□□□□ -1.39
UBC8	YEL012W	TY1A-BR	Q12217	440 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	TY1A-NL2	Q12470	440 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	TY1A-GR2	Q12485	440 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	YPR015C	Q12531	247 aa		6.37	□□□□□ -1.39
UBC8	YEL012W	SEC2	P17065	759 aa		6.36	□□□□□ -1.39
UBC8	YEL012W	YDJ1	P25491	409 aa	Known RBP	6.36	□□□□□ -1.39
UBC8	YEL012W	TTI1	P36097	1038 aa		6.36	□□□□□ -1.39
UBC8	YEL012W	RPL34B	P40525	121 aa	Known RBP	6.36	□□□□□ -1.39
UBC8	YEL012W	YPR204W	Q08995	1032 aa		6.36	□□□□□ -1.39
UBC8	YEL012W	ENO2	P00925	437 aa	Known RBP	6.35	□□□□□ -1.39
UBC8	YEL012W	SPT5	P27692	1063 aa	Known RBP	6.35	□□□□□ -1.39
UBC8	YEL012W	PUS6	P53294	404 aa		6.35	□□□□□ -1.39
UBC8	YEL012W	RTG2	P32608	588 aa	Known RBP	6.34	□□□□□ -1.39
UBC8	YEL012W	BUD20	Q08004	166 aa	Predicted RBP	6.34	□□□□□ -1.39
UBC8	YEL012W	KRE5	P22023	1365 aa		6.33	□□□□□ -1.4
UBC8	YEL012W	MRX10	Q05648	414 aa		6.33	□□□□□ -1.4
UBC8	YEL012W	ENO1	P00924	437 aa	Known RBP	6.32	□□□□□ -1.4
UBC8	YEL012W	CPS1	P27614	576 aa		6.32	□□□□□ -1.4
UBC8	YEL012W	RIM21	P48565	533 aa		6.32	□□□□□ -1.4
UBC8	YEL012W	GYP1	Q08484	637 aa		6.32	□□□□□ -1.4
UBC8	YEL012W	PDR11	P40550	1411 aa		6.32	□□□□□ -1.4
UBC8	YEL012W	SSA1	P10591	642 aa	Known RBP	6.31	□□□□□ -1.4
UBC8	YEL012W	NPL4	P33755	580 aa		6.31	□□□□□ -1.4
UBC8	YEL012W	TUB4	P53378	473 aa		6.31	□□□□□ -1.4
UBC8	YEL012W	RGA2	Q06407	1009 aa		6.31	□□□□□ -1.4
UBC8	YEL012W	SSA4	P22202	642 aa	Known RBP	6.3	□□□□□ -1.4
UBC8	YEL012W	NAF1	P53919	492 aa	Known RBP	6.3	□□□□□ -1.4
UBC8	YEL012W	GCD11	P32481	527 aa	Known RBP	6.29	□□□□□ -1.4
UBC8	YEL012W	GEF1	P37020	779 aa		6.29	□□□□□ -1.4
UBC8	YEL012W	RIA1	P53893	1110 aa		6.29	□□□□□ -1.4
UBC8	YEL012W	NOB1	Q08444	459 aa	Known RBP	6.29	□□□□□ -1.4
UBC8	YEL012W	YDL206W	Q12424	762 aa		6.29	□□□□□ -1.4
UBC8	YEL012W	BCK1	Q01389	1478 aa		6.28	□□□□□ -1.4
UBC8	YEL012W	RAS1	P01119	309 aa		6.27	□□□□□ -1.41
UBC8	YEL012W	RDS2	P19541	446 aa	Known RBP	6.27	□□□□□ -1.41
UBC8	YEL012W	RGA1	P39083	1007 aa		6.27	□□□□□ -1.41
UBC8	YEL012W	PAC1	P39946	494 aa	Known RBP	6.27	□□□□□ -1.41
UBC8	YEL012W	TBF1	Q02457	562 aa		6.27	□□□□□ -1.41
UBC8	YEL012W	CFT1	Q06632	1357 aa	Known RBP	6.27	□□□□□ -1.41
UBC8	YEL012W	PEP12	P32854	288 aa		6.26	□□□□□ -1.41
UBC8	YEL012W	RPA14	P50106	137 aa		6.26	□□□□□ -1.41
UBC8	YEL012W	MCM16	Q12262	181 aa		6.26	□□□□□ -1.41
UBC8	YEL012W	PUP1	P25043	261 aa		6.25	□□□□□ -1.41
UBC8	YEL012W	YNR029C	P53729	429 aa	Known RBP	6.25	□□□□□ -1.41
UBC8	YEL012W	SAS4	Q04003	481 aa		6.25	□□□□□ -1.41
UBC8	YEL012W	YMR074C	Q04773	145 aa		6.25	□□□□□ -1.41
UBC8	YEL012W	YPR084W	Q06821	456 aa		6.25	□□□□□ -1.41
UBC8	YEL012W	YPR097W	Q06839	1073 aa		6.25	□□□□□ -1.41
UBC8	YEL012W	GCN2	P15442	1659 aa		6.24	□□□□□ -1.41
UBC8	YEL012W	PRT1	P06103	763 aa	Known RBP	6.24	□□□□□ -1.41
UBC8	YEL012W	PDC1	P06169	563 aa	Known RBP	6.24	□□□□□ -1.41
UBC8	YEL012W	YML083C	Q04526	418 aa		6.24	□□□□□ -1.41
UBC8	YEL012W	TY3B-I	Q7LHG5	1498 aa	Known RBP	6.23	□□□□□ -1.41
UBC8	YEL012W	SIS2	P36024	562 aa		6.23	□□□□□ -1.41
UBC8	YEL012W	FIG4	P42837	879 aa		6.23	□□□□□ -1.41
UBC8	YEL012W	YPP1	P46951	817 aa		6.23	□□□□□ -1.41
UBC8	YEL012W	ENT1	Q12518	454 aa		6.23	□□□□□ -1.41
UBC8	YEL012W	AMS1	P22855	1083 aa		6.22	□□□□□ -1.41
UBC8	YEL012W	ISF1	P32488	338 aa		6.22	□□□□□ -1.41
UBC8	YEL012W	MRX12	P47084	519 aa		6.22	□□□□□ -1.41
UBC8	YEL012W	NOP8	Q08287	484 aa	Predicted RBP	6.22	□□□□□ -1.41
UBC8	YEL012W	ENV9	Q08651	330 aa		6.22	□□□□□ -1.41
UBC8	YEL012W	TGL4	P36165	910 aa		6.21	□□□□□ -1.42
UBC8	YEL012W	RRN7	P40992	514 aa		6.21	□□□□□ -1.42
UBC8	YEL012W	YML020W	Q03722	664 aa		6.21	□□□□□ -1.42
UBC8	YEL012W	ALR1	Q08269	859 aa		6.21	□□□□□ -1.42
UBC8	YEL012W	TEC1	P18412	486 aa		6.2	□□□□□ -1.42
UBC8	YEL012W	SDH2	P21801	266 aa		6.2	□□□□□ -1.42
UBC8	YEL012W	EMP47	P43555	445 aa		6.2	□□□□□ -1.42
UBC8	YEL012W	FRA1	Q07825	749 aa		6.2	□□□□□ -1.42
UBC8	YEL012W	NUP192	P47054	1683 aa		6.2	□□□□□ -1.42
UBC8	YEL012W	TRK1	P12685	1235 aa		6.19	□□□□□ -1.42
UBC8	YEL012W	TPD3	P31383	635 aa		6.19	□□□□□ -1.42
UBC8	YEL012W	APL6	P46682	809 aa		6.19	□□□□□ -1.42
UBC8	YEL012W	YRF1-2	P40105	1681 aa		6.19	□□□□□ -1.42
UBC8	YEL012W	MOD5	P07884	428 aa		6.18	□□□□□ -1.42
UBC8	YEL012W	SLX8	P40072	274 aa		6.18	□□□□□ -1.42
UBC8	YEL012W	HXT10	P43581	546 aa		6.18	□□□□□ -1.42
UBC8	YEL012W	IMH1	Q06704	911 aa	Known RBP	6.18	□□□□□ -1.42
UBC8	YEL012W	RRP5	Q05022	1729 aa	Known RBP	6.17	□□□□□ -1.42
UBC8	YEL012W	KXD1	P53158	218 aa		6.17	□□□□□ -1.42
UBC8	YEL012W	CAB1	Q04430	367 aa		6.17	□□□□□ -1.42
UBC8	YEL012W	YEL077C	Q3E7X8	1277 aa		6.17	□□□□□ -1.42
UBC8	YEL012W	RAD9	P14737	1309 aa		6.17	□□□□□ -1.42
UBC8	YEL012W	MRF1	P30775	413 aa	Predicted RBP	6.16	□□□□□ -1.42
UBC8	YEL012W	GUT2	P32191	649 aa		6.16	□□□□□ -1.42
UBC8	YEL012W	RRD1	P40454	393 aa	Known RBP	6.16	□□□□□ -1.42
UBC8	YEL012W	SSM4	P40318	1319 aa		6.16	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms