RNA–Protein interactions for RNA: YDR528W

HLR1, Transcript of Protein involved in regulation of cell wall composition and integrity, yeast

Gene HLR1, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HLR1	YDR528W	HPC2	Q01448	625 aa		5.98	□□□□□ -1.45
HLR1	YDR528W	YMR187C	Q03236	431 aa		5.97	□□□□□ -1.45
HLR1	YDR528W	MCM16	Q12262	181 aa		5.97	□□□□□ -1.45
HLR1	YDR528W	SBP1	P10080	294 aa	Known RBP	5.96	□□□□□ -1.46
HLR1	YDR528W	MRX12	P47084	519 aa		5.96	□□□□□ -1.46
HLR1	YDR528W	TBS1	P38114	1094 aa		5.95	□□□□□ -1.46
HLR1	YDR528W	YNR014W	P53719	212 aa		5.95	□□□□□ -1.46
HLR1	YDR528W	TFB3	Q03290	321 aa		5.95	□□□□□ -1.46
HLR1	YDR528W	YDJ1	P25491	409 aa	Known RBP	5.94	□□□□□ -1.46
HLR1	YDR528W	CSE4	P36012	229 aa		5.94	□□□□□ -1.46
HLR1	YDR528W	ALA1	P40825	983 aa	Known RBP	5.94	□□□□□ -1.46
HLR1	YDR528W	BRL1	P38770	471 aa		5.93	□□□□□ -1.46
HLR1	YDR528W	SUM1	P46676	1062 aa		5.93	□□□□□ -1.46
HLR1	YDR528W	JJJ2	P46997	583 aa		5.93	□□□□□ -1.46
HLR1	YDR528W	GPM1	P00950	247 aa	Known RBP	5.92	□□□□□ -1.46
HLR1	YDR528W	PKC1	P24583	1151 aa		5.92	□□□□□ -1.46
HLR1	YDR528W	SHM1	P37292	490 aa	Predicted RBP	5.92	□□□□□ -1.46
HLR1	YDR528W	YCK2	P23292	546 aa	Known RBP	5.91	□□□□□ -1.46
HLR1	YDR528W	IRE1	P32361	1115 aa		5.91	□□□□□ -1.46
HLR1	YDR528W	YBL036C	P38197	257 aa		5.91	□□□□□ -1.46
HLR1	YDR528W	MCX1	P38323	520 aa	Predicted RBP	5.91	□□□□□ -1.46
HLR1	YDR528W	SLX8	P40072	274 aa		5.91	□□□□□ -1.46
HLR1	YDR528W	TAF7	Q05021	590 aa		5.91	□□□□□ -1.46
HLR1	YDR528W	FPS1	P23900	669 aa		5.9	□□□□□ -1.46
HLR1	YDR528W	SPT5	P27692	1063 aa	Known RBP	5.9	□□□□□ -1.46
HLR1	YDR528W	HGH1	P48362	394 aa	Known RBP	5.9	□□□□□ -1.46
HLR1	YDR528W	SOH1	P38633	127 aa		5.89	□□□□□ -1.47
HLR1	YDR528W	BOI2	P39969	1040 aa		5.89	□□□□□ -1.47
HLR1	YDR528W	HDA3	Q06623	655 aa		5.89	□□□□□ -1.47
HLR1	YDR528W	MRPL16	P38064	232 aa		5.88	□□□□□ -1.47
HLR1	YDR528W	SLN1	P39928	1220 aa	Predicted RBP	5.88	□□□□□ -1.47
HLR1	YDR528W	PSH1	Q12161	406 aa		5.88	□□□□□ -1.47
HLR1	YDR528W	YDR215C	Q12240	137 aa		5.87	□□□□□ -1.47
HLR1	YDR528W	PDC6	P26263	563 aa	Known RBP	5.86	□□□□□ -1.47
HLR1	YDR528W	BIO2	P32451	375 aa		5.86	□□□□□ -1.47
HLR1	YDR528W	STB3	Q12427	513 aa		5.86	□□□□□ -1.47
HLR1	YDR528W	DMA2	P53924	522 aa		5.85	□□□□□ -1.47
HLR1	YDR528W	MCA1	Q08601	432 aa		5.85	□□□□□ -1.47
HLR1	YDR528W	AMN1	P38285	549 aa	Predicted RBP	5.84	□□□□□ -1.47
HLR1	YDR528W	RPS31	P05759	152 aa	Known RBP	5.83	□□□□□ -1.48
HLR1	YDR528W	PDC5	P16467	563 aa	Known RBP	5.83	□□□□□ -1.48
HLR1	YDR528W	UTP13	Q05946	817 aa	Known RBP	5.83	□□□□□ -1.48
HLR1	YDR528W	SPR3	P41901	512 aa		5.82	□□□□□ -1.48
HLR1	YDR528W	KNS1	P32350	737 aa	Predicted RBP	5.81	□□□□□ -1.48
HLR1	YDR528W	MET1	P36150	593 aa		5.81	□□□□□ -1.48
HLR1	YDR528W	ATG3	P40344	310 aa		5.81	□□□□□ -1.48
HLR1	YDR528W	TY1A-DR2	Q03964	440 aa	Known RBP	5.81	□□□□□ -1.48
HLR1	YDR528W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.81	□□□□□ -1.48	not detected
HLR1	YDR528W	YNL108C	P53929	270 aa		5.8	□□□□□ -1.48
HLR1	YDR528W	YPQ2	Q06328	317 aa		5.8	□□□□□ -1.48
HLR1	YDR528W	SWI5	P08153	709 aa		5.79	□□□□□ -1.48
HLR1	YDR528W	SUP45	P12385	437 aa	Known RBP	5.79	□□□□□ -1.48
HLR1	YDR528W	LSB6	P42951	607 aa		5.79	□□□□□ -1.48
HLR1	YDR528W	YJL007C	P47080	104 aa		5.79	□□□□□ -1.48
HLR1	YDR528W	ENO2	P00925	437 aa	Known RBP	5.78	□□□□□ -1.48
HLR1	YDR528W	TAT1	P38085	619 aa		5.78	□□□□□ -1.48
HLR1	YDR528W	YPP1	P46951	817 aa		5.78	□□□□□ -1.48
HLR1	YDR528W	PRY1	P47032	299 aa		5.78	□□□□□ -1.48
HLR1	YDR528W	MSC7	P38694	644 aa		5.77	□□□□□ -1.49
HLR1	YDR528W	LEU1	P07264	779 aa	Known RBP	5.76	□□□□□ -1.49
HLR1	YDR528W	ALD2	P47771	506 aa		5.76	□□□□□ -1.49
HLR1	YDR528W	YNL165W	P53891	406 aa		5.76	□□□□□ -1.49
HLR1	YDR528W	BIM1	P40013	344 aa		5.75	□□□□□ -1.49
HLR1	YDR528W	AIM9	P40053	627 aa	Known RBP	5.75	□□□□□ -1.49
HLR1	YDR528W	RIM21	P48565	533 aa		5.75	□□□□□ -1.49
HLR1	YDR528W	GLT1	Q12680	2145 aa	Known RBP	5.75	□□□□□ -1.49
HLR1	YDR528W	RDS2	P19541	446 aa	Known RBP	5.74	□□□□□ -1.49
HLR1	YDR528W	ATG32	P40458	529 aa		5.74	□□□□□ -1.49
HLR1	YDR528W	RPS6A	P0CX37	236 aa	Known RBP	5.72	□□□□□ -1.49
HLR1	YDR528W	RPS6B	P0CX38	236 aa	Predicted RBP	5.72	□□□□□ -1.49
HLR1	YDR528W	TIF1	P10081	395 aa	Known RBP	5.71	□□□□□ -1.5
HLR1	YDR528W	RGP1	P16664	663 aa		5.71	□□□□□ -1.5
HLR1	YDR528W	MAC1	P35192	417 aa		5.71	□□□□□ -1.5
HLR1	YDR528W	YPL034W	Q03083	165 aa		5.71	□□□□□ -1.5
HLR1	YDR528W	ENO1	P00924	437 aa	Known RBP	5.69	□□□□□ -1.5
HLR1	YDR528W	MLF3	P32047	452 aa		5.69	□□□□□ -1.5
HLR1	YDR528W	YTA6	P40328	754 aa		5.69	□□□□□ -1.5
HLR1	YDR528W	RPL34B	P40525	121 aa	Known RBP	5.69	□□□□□ -1.5
HLR1	YDR528W	ALO1	P54783	526 aa	Known RBP	5.69	□□□□□ -1.5
HLR1	YDR528W	MRX10	Q05648	414 aa		5.69	□□□□□ -1.5
HLR1	YDR528W	MCM1	P11746	286 aa		5.68	□□□□□ -1.5
HLR1	YDR528W	RTG2	P32608	588 aa	Known RBP	5.68	□□□□□ -1.5
HLR1	YDR528W	NTH2	P35172	780 aa		5.68	□□□□□ -1.5
HLR1	YDR528W	RLF2	Q12495	606 aa		5.68	□□□□□ -1.5
HLR1	YDR528W	PGM2	P37012	569 aa	Known RBP	5.67	□□□□□ -1.5
HLR1	YDR528W	TPS3	P38426	1054 aa	Known RBP	5.67	□□□□□ -1.5
HLR1	YDR528W	Q0182	Q9ZZW1	134 aa		5.67	□□□□□ -1.5
HLR1	YDR528W	RPP1A	P05318	106 aa	Predicted RBP	5.66	□□□□□ -1.5
HLR1	YDR528W	PDI1	P17967	522 aa	Known RBP	5.66	□□□□□ -1.5
HLR1	YDR528W	ALG14	P38242	237 aa		5.66	□□□□□ -1.5
HLR1	YDR528W	YFL034W	P43564	1073 aa		5.66	□□□□□ -1.5
HLR1	YDR528W	NHA1	Q99271	985 aa		5.66	□□□□□ -1.5
HLR1	YDR528W	BUD9	P53226	547 aa		5.65	□□□□□ -1.5
HLR1	YDR528W	PRK1	P40494	810 aa		5.64	□□□□□ -1.51
HLR1	YDR528W	PEP12	P32854	288 aa		5.62	□□□□□ -1.51
HLR1	YDR528W	MTO1	P53070	669 aa		5.62	□□□□□ -1.51
HLR1	YDR528W	HEH2	Q03281	663 aa		5.62	□□□□□ -1.51
HLR1	YDR528W	NAR1	P23503	491 aa	Known RBP	5.61	□□□□□ -1.51
HLR1	YDR528W	OMA1	P36163	345 aa		5.61	□□□□□ -1.51
HLR1	YDR528W	GAS5	Q08193	484 aa		5.61	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 69.3 ms