RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W TY1A-MR1Q04215 440 aa8.35□□□□□ -1.07
RRP17YDR412W PDI1P17967 522 aaKnown RBP8.34□□□□□ -1.07
RRP17YDR412W DAL1P32375 460 aa8.34□□□□□ -1.07
RRP17YDR412W TBS1P38114 1094 aa8.34□□□□□ -1.07
RRP17YDR412W SUM1P46676 1062 aa8.34□□□□□ -1.07
RRP17YDR412W VTC4P47075 721 aa8.34□□□□□ -1.07
RRP17YDR412W SHM1P37292 490 aaPredicted RBP8.33□□□□□ -1.08
RRP17YDR412W ACS2P52910 683 aaKnown RBP8.32□□□□□ -1.08
RRP17YDR412W YPQ2Q06328 317 aa8.32□□□□□ -1.08
RRP17YDR412W CPS1P27614 576 aa8.31□□□□□ -1.08
RRP17YDR412W NTH2P35172 780 aa8.31□□□□□ -1.08
RRP17YDR412W RPS6AP0CX37 236 aaKnown RBP8.3□□□□□ -1.08
RRP17YDR412W RPS6BP0CX38 236 aaPredicted RBP8.3□□□□□ -1.08
RRP17YDR412W MSN5P52918 1224 aa8.3□□□□□ -1.08
RRP17YDR412W RPP2BP02400 110 aaKnown RBP8.29□□□□□ -1.08
RRP17YDR412W HPF1Q05164 967 aa8.28□□□□□ -1.08
RRP17YDR412W TSC13Q99190 310 aa8.28□□□□□ -1.08
RRP17YDR412W TGL4P36165 910 aa8.27□□□□□ -1.09
RRP17YDR412W JJJ2P46997 583 aa8.27□□□□□ -1.09
RRP17YDR412W RGA2Q06407 1009 aa8.27□□□□□ -1.09
RRP17YDR412W RPS31P05759 152 aaKnown RBP8.26□□□□□ -1.09
RRP17YDR412W YNL165WP53891 406 aa8.26□□□□□ -1.09
RRP17YDR412W PHO87P25360 923 aa8.25□□□□□ -1.09
RRP17YDR412W ROM1P53046 1155 aa8.25□□□□□ -1.09
RRP17YDR412W ALA1P40825 983 aaKnown RBP8.24□□□□□ -1.09
RRP17YDR412W GAL2P13181 574 aa8.23□□□□□ -1.09
RRP17YDR412W CUZ1P53899 274 aa8.23□□□□□ -1.09
RRP17YDR412W PUP1P25043 261 aa8.22□□□□□ -1.09
RRP17YDR412W IRE1P32361 1115 aa8.22□□□□□ -1.09
RRP17YDR412W UBP15P50101 1230 aa8.22□□□□□ -1.09
RRP17YDR412W ECM23Q02710 187 aa8.22□□□□□ -1.09
RRP17YDR412W PSH1Q12161 406 aa8.22□□□□□ -1.09
RRP17YDR412W AHP1P38013 176 aaKnown RBP8.21□□□□□ -1.1
RRP17YDR412W YFL034WP43564 1073 aa8.21□□□□□ -1.1
RRP17YDR412W YGR035CP53222 116 aa8.21□□□□□ -1.1
RRP17YDR412W CYT1P07143 309 aa8.2□□□□□ -1.1
RRP17YDR412W YML083CQ04526 418 aa8.2□□□□□ -1.1
RRP17YDR412W PDC6P26263 563 aaKnown RBP8.19□□□□□ -1.1
RRP17YDR412W SIS2P36024 562 aa8.19□□□□□ -1.1
RRP17YDR412W HAP4P14064 554 aa8.17□□□□□ -1.1
RRP17YDR412W NOB1Q08444 459 aaKnown RBP8.17□□□□□ -1.1
RRP17YDR412W MCM1P11746 286 aa8.16□□□□□ -1.1
RRP17YDR412W SUV3P32580 737 aa8.16□□□□□ -1.1
RRP17YDR412W GAS4Q08271 471 aa8.16□□□□□ -1.1
RRP17YDR412W ALD2P47771 506 aa8.15□□□□□ -1.1
RRP17YDR412W UBP1P25037 809 aa8.14□□□□□ -1.11
RRP17YDR412W TRK2P28584 889 aa8.14□□□□□ -1.11
RRP17YDR412W MLF3P32047 452 aa8.14□□□□□ -1.11
RRP17YDR412W UBX7P38349 436 aa8.14□□□□□ -1.11
RRP17YDR412W DIT1P21623 536 aa8.13□□□□□ -1.11
RRP17YDR412W HXT5P38695 592 aa8.13□□□□□ -1.11
RRP17YDR412W Q0182Q9ZZW1 134 aa8.13□□□□□ -1.11
RRP17YDR412W JJJ3P47138 172 aa8.12□□□□□ -1.11
RRP17YDR412W YMR265CQ03508 461 aaKnown RBP8.12□□□□□ -1.11
RRP17YDR412W LEU1P07264 779 aaKnown RBP8.1□□□□□ -1.11
RRP17YDR412W NGR1P32831 672 aaKnown RBP8.1□□□□□ -1.11
RRP17YDR412W SYT1Q06836 1226 aa8.1□□□□□ -1.11
RRP17YDR412W MRPL16P38064 232 aa8.09□□□□□ -1.11
RRP17YDR412W CEM1P39525 442 aa8.09□□□□□ -1.11
RRP17YDR412W KRE33P53914 1056 aaKnown RBP8.09□□□□□ -1.11
RRP17YDR412W LYS5P50113 272 aa8.08□□□□□ -1.12
RRP17YDR412W STB3Q12427 513 aa8.08□□□□□ -1.12
RRP17YDR412W ADE12P80210 433 aaKnown RBP8.07□□□□□ -1.12
RRP17YDR412W DPH6Q12429 685 aa8.06□□□□□ -1.12
RRP17YDR412W RLF2Q12495 606 aa8.06□□□□□ -1.12
RRP17YDR412W VAN1P23642 535 aa8.05□□□□□ -1.12
RRP17YDR412W TPS3P38426 1054 aaKnown RBP8.05□□□□□ -1.12
RRP17YDR412W SPR3P41901 512 aa8.05□□□□□ -1.12
RRP17YDR412W CAB1Q04430 367 aa8.05□□□□□ -1.12
RRP17YDR412W YDR461C-AQ2V2P7 80 aa8.05□□□□□ -1.12
RRP17YDR412W SSA4P22202 642 aaKnown RBP8.04□□□□□ -1.12
RRP17YDR412W SUB2Q07478 446 aaKnown RBP8.04□□□□□ -1.12
RRP17YDR412W RGP1P16664 663 aa8.02□□□□□ -1.13
RRP17YDR412W MDJ1P35191 511 aa8.01□□□□□ -1.13
RRP17YDR412W MSC7P38694 644 aa8.01□□□□□ -1.13
RRP17YDR412W MTO1P53070 669 aa8.01□□□□□ -1.13
RRP17YDR412W FOX2Q02207 900 aaKnown RBP8.01□□□□□ -1.13
RRP17YDR412W NAB2P32505 525 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
RRP17YDR412W YBR197CP38306 217 aa8□□□□□ -1.13
RRP17YDR412W ALD4P46367 519 aaKnown RBP8□□□□□ -1.13
RRP17YDR412W TRS33Q99394 268 aa8□□□□□ -1.13
RRP17YDR412W YTA6P40328 754 aa7.99□□□□□ -1.13
RRP17YDR412W SCD5P34758 872 aa7.98□□□□□ -1.13
RRP17YDR412W YFL066CP43538 392 aa7.98□□□□□ -1.13
RRP17YDR412W CWC15Q03772 175 aaKnown RBP7.98□□□□□ -1.13
RRP17YDR412W FPS1P23900 669 aa7.97□□□□□ -1.13
RRP17YDR412W TY1A-DR2Q03964 440 aaKnown RBP7.97□□□□□ -1.13
RRP17YDR412W UTP4Q06679 776 aaKnown RBP7.97□□□□□ -1.13
RRP17YDR412W PUN1Q06991 263 aa7.97□□□□□ -1.13
RRP17YDR412W QDR2P40474 542 aa7.96□□□□□ -1.14
RRP17YDR412W SBE2P42223 864 aaKnown RBP7.96□□□□□ -1.14
RRP17YDR412W YNR040WP53736 256 aa7.96□□□□□ -1.14
RRP17YDR412W RPC31P17890 251 aa7.95□□□□□ -1.14
RRP17YDR412W ISC10P32645 267 aa7.95□□□□□ -1.14
RRP17YDR412W KAP122P32767 1081 aa7.95□□□□□ -1.14
RRP17YDR412W CUS1Q02554 436 aaPredicted RBP7.95□□□□□ -1.14
RRP17YDR412W GPM1P00950 247 aaKnown RBP7.94□□□□□ -1.14
RRP17YDR412W MRPL33P20084 86 aa7.94□□□□□ -1.14
RRP17YDR412W VMA3P25515 160 aa7.94□□□□□ -1.14
RRP17YDR412W BOI1P38041 980 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 79.3 ms