RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W SRP40P32583 406 aaPredicted RBP1.9□□□□□ -2.1
MSN5YDR335W RNH70P53331 553 aa1.9□□□□□ -2.1
MSN5YDR335W VPS72Q03388 795 aa1.9□□□□□ -2.1
MSN5YDR335W ESP1Q03018 1630 aa1.9□□□□□ -2.1
MSN5YDR335W TOP1P04786 769 aa1.9□□□□□ -2.11
MSN5YDR335W OYE2Q03558 400 aaKnown RBP1.9□□□□□ -2.11
MSN5YDR335W NTE1Q04958 1679 aa1.9□□□□□ -2.11
MSN5YDR335W CDC4P07834 779 aa1.9□□□□□ -2.11
MSN5YDR335W SUP45P12385 437 aaKnown RBP1.9□□□□□ -2.11
MSN5YDR335W TEC1P18412 486 aa1.9□□□□□ -2.11
MSN5YDR335W PEP7P32609 515 aa1.9□□□□□ -2.11
MSN5YDR335W SPC42P36094 363 aa1.9□□□□□ -2.11
MSN5YDR335W BUD21Q08492 214 aaPredicted RBP1.9□□□□□ -2.11
MSN5YDR335W PDR15Q04182 1529 aaKnown RBP1.9□□□□□ -2.11
MSN5YDR335W YKL091CP33324 310 aaKnown RBP1.89□□□□□ -2.11
MSN5YDR335W GRS1P38088 690 aaKnown RBP1.89□□□□□ -2.11
MSN5YDR335W TBS1P38114 1094 aa1.89□□□□□ -2.11
MSN5YDR335W YJR115WP47152 169 aa1.89□□□□□ -2.11
MSN5YDR335W HPC2Q01448 625 aa1.89□□□□□ -2.11
MSN5YDR335W YBL113CQ7M4S9 792 aa1.89□□□□□ -2.11
MSN5YDR335W YTA7P40340 1379 aa1.89□□□□□ -2.11
MSN5YDR335W SSF1P38789 453 aaPredicted RBP1.89□□□□□ -2.11
MSN5YDR335W DLD3P39976 496 aaKnown RBP1.89□□□□□ -2.11
MSN5YDR335W POL32P47110 350 aa1.89□□□□□ -2.11
MSN5YDR335W RTF1P53064 558 aa1.89□□□□□ -2.11
MSN5YDR335W YLR346CQ06139 101 aa1.89□□□□□ -2.11
MSN5YDR335W BDS1Q08347 646 aa1.89□□□□□ -2.11
MSN5YDR335W TTI1P36097 1038 aa1.89□□□□□ -2.11
MSN5YDR335W RPA14P50106 137 aa1.89□□□□□ -2.11
MSN5YDR335W CWC24P53769 259 aa1.89□□□□□ -2.11
MSN5YDR335W ECM23Q02710 187 aa1.89□□□□□ -2.11
MSN5YDR335W HED1Q03937 162 aa1.89□□□□□ -2.11
MSN5YDR335W SVF1Q05515 481 aa1.89□□□□□ -2.11
MSN5YDR335W PUP1P25043 261 aa1.88□□□□□ -2.11
MSN5YDR335W PAM1P37304 830 aaKnown RBP1.88□□□□□ -2.11
MSN5YDR335W MRX10Q05648 414 aa1.88□□□□□ -2.11
MSN5YDR335W VAC8P39968 578 aa1.88□□□□□ -2.11
MSN5YDR335W AIM21P40563 679 aa1.88□□□□□ -2.11
MSN5YDR335W RIM21P48565 533 aa1.88□□□□□ -2.11
MSN5YDR335W GUT2P32191 649 aa1.88□□□□□ -2.11
MSN5YDR335W UTP7P40055 554 aaKnown RBP1.88□□□□□ -2.11
MSN5YDR335W RRD1P40454 393 aaKnown RBP1.88□□□□□ -2.11
MSN5YDR335W STE20Q03497 939 aaKnown RBP1.88□□□□□ -2.11
MSN5YDR335W YDR444WQ04093 687 aa1.88□□□□□ -2.11
MSN5YDR335W YPR097WQ06839 1073 aa1.88□□□□□ -2.11
MSN5YDR335W MCM16Q12262 181 aa1.88□□□□□ -2.11
MSN5YDR335W TY1B-HO13535 1793 aa1.88□□□□□ -2.11
MSN5YDR335W TY1B-DR5P0C2I2 1755 aa1.88□□□□□ -2.11
MSN5YDR335W TY1B-DR6P0C2I3 1755 aa1.88□□□□□ -2.11
MSN5YDR335W TY1B-LR2P0C2I5 1755 aa1.88□□□□□ -2.11
MSN5YDR335W TY1B-LR3P0C2I6 1755 aaKnown RBP1.88□□□□□ -2.11
MSN5YDR335W TY1B-PR1P0C2I9 1755 aaKnown RBP1.88□□□□□ -2.11
MSN5YDR335W TY1B-PR2P0C2J0 1756 aa1.88□□□□□ -2.11
MSN5YDR335W TY1B-PR3P0C2J1 1755 aaKnown RBP1.88□□□□□ -2.11
MSN5YDR335W TY1B-JR1P47098 1755 aa1.88□□□□□ -2.11
MSN5YDR335W TY1B-ML2Q03434 1755 aaKnown RBP1.88□□□□□ -2.11
MSN5YDR335W TY1B-ER1Q03612 1755 aa1.88□□□□□ -2.11
MSN5YDR335W TY1B-ML1Q04711 1755 aaKnown RBP1.88□□□□□ -2.11
MSN5YDR335W TY1B-GR2Q12269 1755 aa1.88□□□□□ -2.11
MSN5YDR335W TY1B-OLQ12273 1755 aa1.88□□□□□ -2.11
MSN5YDR335W TY1B-PLQ12414 1755 aaKnown RBP1.88□□□□□ -2.11
MSN5YDR335W MAK16P10962 306 aaPredicted RBP1.87□□□□□ -2.11
MSN5YDR335W RRP14P36080 434 aaKnown RBP1.87□□□□□ -2.11
MSN5YDR335W UBX7P38349 436 aa1.87□□□□□ -2.11
MSN5YDR335W MAD1P40957 749 aa1.87□□□□□ -2.11
MSN5YDR335W NNF1P47149 201 aa1.87□□□□□ -2.11
MSN5YDR335W ARG82P07250 355 aa1.87□□□□□ -2.11
MSN5YDR335W ALD2P47771 506 aa1.87□□□□□ -2.11
MSN5YDR335W CAF120P53836 1060 aa1.87□□□□□ -2.11
MSN5YDR335W KAR5Q04746 504 aa1.87□□□□□ -2.11
MSN5YDR335W MIP1P15801 1254 aa1.87□□□□□ -2.11
MSN5YDR335W SOH1P38633 127 aa1.86□□□□□ -2.11
MSN5YDR335W PTK2P47116 818 aaKnown RBP1.86□□□□□ -2.11
MSN5YDR335W YNL165WP53891 406 aa1.86□□□□□ -2.11
MSN5YDR335W ECM16Q04217 1267 aaKnown RBP1.86□□□□□ -2.11
MSN5YDR335W ISR1Q06098 443 aaKnown RBP1.86□□□□□ -2.11
MSN5YDR335W CBC2Q08920 208 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
MSN5YDR335W VAC17P25591 423 aa1.86□□□□□ -2.11
MSN5YDR335W GRX7P38068 203 aa1.86□□□□□ -2.11
MSN5YDR335W STM1P39015 273 aaKnown RBP1.86□□□□□ -2.11
MSN5YDR335W ATG20Q07528 640 aa1.86□□□□□ -2.11
MSN5YDR335W PDI1P17967 522 aaKnown RBP1.86□□□□□ -2.11
MSN5YDR335W TOM20P35180 183 aa1.86□□□□□ -2.11
MSN5YDR335W ALD6P54115 500 aaKnown RBP1.86□□□□□ -2.11
MSN5YDR335W SEC8P32855 1065 aa1.85□□□□□ -2.11
MSN5YDR335W ERP5P38819 212 aa1.85□□□□□ -2.11
MSN5YDR335W YAF9P53930 226 aa1.85□□□□□ -2.11
MSN5YDR335W NAB2P32505 525 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
MSN5YDR335W YHL050CP38721 697 aa1.85□□□□□ -2.11
MSN5YDR335W YHR219WP38900 624 aa1.85□□□□□ -2.11
MSN5YDR335W MDG1P53885 366 aa1.85□□□□□ -2.11
MSN5YDR335W FOX2Q02207 900 aaKnown RBP1.85□□□□□ -2.11
MSN5YDR335W CDC53Q12018 815 aaKnown RBP1.85□□□□□ -2.11
MSN5YDR335W WRS1Q12109 432 aaKnown RBP1.85□□□□□ -2.11
MSN5YDR335W YOR131CQ12486 218 aa1.85□□□□□ -2.11
MSN5YDR335W TY2B-LR1P0C2J3 1770 aa1.85□□□□□ -2.11
MSN5YDR335W TY2B-FP0CX63 1770 aa1.85□□□□□ -2.11
MSN5YDR335W TY2B-GR2P0CX64 1770 aa1.85□□□□□ -2.11
MSN5YDR335W TY2B-CP25384 1770 aa1.85□□□□□ -2.11
MSN5YDR335W TY2B-DR2Q03494 1770 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms