RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W TPD3P31383 635 aa2.13□□□□□ -2.07
CFT1YDR301W MAP2P38174 421 aaKnown RBP2.13□□□□□ -2.07
CFT1YDR301W YBP2P53169 641 aa2.13□□□□□ -2.07
CFT1YDR301W RLF2Q12495 606 aa2.13□□□□□ -2.07
CFT1YDR301W DAL5P15365 543 aa2.13□□□□□ -2.07
CFT1YDR301W NPL4P33755 580 aa2.13□□□□□ -2.07
CFT1YDR301W ALD3P54114 506 aa2.13□□□□□ -2.07
CFT1YDR301W BMS1Q08965 1183 aaKnown RBP2.13□□□□□ -2.07
CFT1YDR301W YPR204WQ08995 1032 aa2.13□□□□□ -2.07
CFT1YDR301W GSC2P40989 1895 aa2.13□□□□□ -2.07
CFT1YDR301W SSA2P10592 639 aaKnown RBP2.12□□□□□ -2.07
CFT1YDR301W RAT1Q02792 1006 aaKnown RBP2.12□□□□□ -2.07
CFT1YDR301W ADR1P07248 1323 aa2.12□□□□□ -2.07
CFT1YDR301W BOI2P39969 1040 aa2.12□□□□□ -2.07
CFT1YDR301W MGA2P40578 1113 aa2.12□□□□□ -2.07
CFT1YDR301W ECM16Q04217 1267 aaKnown RBP2.12□□□□□ -2.07
CFT1YDR301W TUM1Q08686 304 aaKnown RBP2.12□□□□□ -2.07
CFT1YDR301W CDC16P09798 840 aa2.12□□□□□ -2.07
CFT1YDR301W MRP7P12687 371 aa2.12□□□□□ -2.07
CFT1YDR301W ERT1P38140 529 aa2.12□□□□□ -2.07
CFT1YDR301W PFF1P38244 976 aa2.12□□□□□ -2.07
CFT1YDR301W RRT14P40470 206 aa2.12□□□□□ -2.07
CFT1YDR301W RAD2P07276 1031 aa2.12□□□□□ -2.07
CFT1YDR301W UGA2P38067 497 aa2.12□□□□□ -2.07
CFT1YDR301W YBL086CP38177 466 aa2.12□□□□□ -2.07
CFT1YDR301W SSF1P38789 453 aaPredicted RBP2.12□□□□□ -2.07
CFT1YDR301W ALE1Q08548 619 aa2.12□□□□□ -2.07
CFT1YDR301W SIT4P20604 311 aa2.11□□□□□ -2.07
CFT1YDR301W YJL181WP46987 611 aa2.11□□□□□ -2.07
CFT1YDR301W UBX2Q04228 584 aa2.11□□□□□ -2.07
CFT1YDR301W HAT1Q12341 374 aa2.11□□□□□ -2.07
CFT1YDR301W YIR014WP40570 242 aa2.11□□□□□ -2.07
CFT1YDR301W UBP16Q02863 499 aa2.11□□□□□ -2.07
CFT1YDR301W ERO1Q03103 563 aa2.11□□□□□ -2.07
CFT1YDR301W GEF1P37020 779 aa2.11□□□□□ -2.07
CFT1YDR301W UBP12P39538 1254 aa2.11□□□□□ -2.07
CFT1YDR301W LYS4P49367 693 aaPredicted RBP2.1□□□□□ -2.07
CFT1YDR301W SYF1Q04048 859 aaPredicted RBP2.1□□□□□ -2.07
CFT1YDR301W YKL222CP35995 705 aa2.1□□□□□ -2.07
CFT1YDR301W RAD50P12753 1312 aa2.1□□□□□ -2.07
CFT1YDR301W POM152P39685 1337 aa2.1□□□□□ -2.07
CFT1YDR301W NUG1P40010 520 aaKnown RBP2.1□□□□□ -2.07
CFT1YDR301W POL32P47110 350 aa2.1□□□□□ -2.07
CFT1YDR301W TEA1P47988 759 aa2.1□□□□□ -2.07
CFT1YDR301W CSI1Q04368 295 aa2.1□□□□□ -2.07
CFT1YDR301W FLO1P32768 1537 aa2.1□□□□□ -2.07
CFT1YDR301W LPD1P09624 499 aaKnown RBP2.09□□□□□ -2.07
CFT1YDR301W RAD24P32641 659 aa2.09□□□□□ -2.07
CFT1YDR301W ITC1P53125 1264 aa2.09□□□□□ -2.07
CFT1YDR301W YPR148CQ06523 435 aa2.09□□□□□ -2.07
CFT1YDR301W PSF3Q12146 194 aa2.09□□□□□ -2.07
CFT1YDR301W CTT1P06115 562 aa2.09□□□□□ -2.07
CFT1YDR301W TRP5P00931 707 aaKnown RBP2.09□□□□□ -2.08
CFT1YDR301W SUP35P05453 685 aaKnown RBP2.09□□□□□ -2.08
CFT1YDR301W PDR18P53756 1333 aa2.09□□□□□ -2.08
CFT1YDR301W PIF1P07271 859 aa2.08□□□□□ -2.08
CFT1YDR301W OSH3P38713 996 aaKnown RBP2.08□□□□□ -2.08
CFT1YDR301W RSM7P47150 247 aa2.08□□□□□ -2.08
CFT1YDR301W GYP5Q12344 894 aa2.08□□□□□ -2.08
CFT1YDR301W GRX6Q12438 231 aa2.08□□□□□ -2.08
CFT1YDR301W MYO1P08964 1928 aa2.08□□□□□ -2.08
CFT1YDR301W CYB2P00175 591 aa2.08□□□□□ -2.08
CFT1YDR301W APL2P36000 726 aaPredicted RBP2.08□□□□□ -2.08
CFT1YDR301W GLO3P38682 493 aaKnown RBP2.08□□□□□ -2.08
CFT1YDR301W KIN4Q01919 800 aa2.08□□□□□ -2.08
CFT1YDR301W WSC3Q12215 556 aa2.08□□□□□ -2.08
CFT1YDR301W FKS1P38631 1876 aaKnown RBP2.07□□□□□ -2.08
CFT1YDR301W YNG2P38806 282 aaKnown RBP2.07□□□□□ -2.08
CFT1YDR301W ZDS2P54786 942 aa2.07□□□□□ -2.08
CFT1YDR301W ICP55P40051 511 aa2.07□□□□□ -2.08
CFT1YDR301W YNR021WP53723 404 aaKnown RBP2.07□□□□□ -2.08
CFT1YDR301W BDF2Q07442 638 aa2.07□□□□□ -2.08
CFT1YDR301W OPI1P21957 404 aa2.07□□□□□ -2.08
CFT1YDR301W SHC1P39000 512 aa2.07□□□□□ -2.08
CFT1YDR301W PES4P39684 611 aa2.07□□□□□ -2.08
CFT1YDR301W NOP8Q08287 484 aaPredicted RBP2.07□□□□□ -2.08
CFT1YDR301W PSH1Q12161 406 aa2.07□□□□□ -2.08
CFT1YDR301W DPH6Q12429 685 aa2.07□□□□□ -2.08
CFT1YDR301W NUP133P36161 1157 aa2.07□□□□□ -2.08
CFT1YDR301W YJL171CP46992 396 aa2.07□□□□□ -2.08
CFT1YDR301W MLC1P53141 149 aa2.07□□□□□ -2.08
CFT1YDR301W SPB4P25808 606 aaPredicted RBP2.06□□□□□ -2.08
CFT1YDR301W FPR3P38911 411 aaKnown RBP2.06□□□□□ -2.08
CFT1YDR301W EPS1P40557 701 aa2.06□□□□□ -2.08
CFT1YDR301W YGL242CP53066 181 aa2.06□□□□□ -2.08
CFT1YDR301W RIX7Q07844 837 aaKnown RBP2.06□□□□□ -2.08
CFT1YDR301W KRE2P27809 442 aa2.06□□□□□ -2.08
CFT1YDR301W ECM21P38167 1117 aaKnown RBP2.06□□□□□ -2.08
CFT1YDR301W ILV3P39522 585 aaKnown RBP2.06□□□□□ -2.08
CFT1YDR301W FPK1P53739 893 aa2.06□□□□□ -2.08
CFT1YDR301W KAR5Q04746 504 aa2.06□□□□□ -2.08
CFT1YDR301W BRE1Q07457 700 aaKnown RBP2.06□□□□□ -2.08
CFT1YDR301W AIM7Q12156 149 aa2.06□□□□□ -2.08
CFT1YDR301W SSA1P10591 642 aaKnown RBP2.06□□□□□ -2.08
CFT1YDR301W OXP1P28273 1286 aa2.06□□□□□ -2.08
CFT1YDR301W SER1P33330 395 aaKnown RBP2.06□□□□□ -2.08
CFT1YDR301W KTR3P38130 404 aaPredicted RBP2.06□□□□□ -2.08
CFT1YDR301W BBC1P47068 1157 aa2.06□□□□□ -2.08
CFT1YDR301W ECM23Q02710 187 aa2.06□□□□□ -2.08
CFT1YDR301W NOT3P06102 836 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms