RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C SEC8P32855 1065 aa2.8□□□□□ -1.96
SSD1YDR293C MET1P36150 593 aa2.8□□□□□ -1.96
SSD1YDR293C GLO3P38682 493 aaKnown RBP2.8□□□□□ -1.96
SSD1YDR293C RNH70P53331 553 aa2.8□□□□□ -1.96
SSD1YDR293C CTF4Q01454 927 aa2.8□□□□□ -1.96
SSD1YDR293C SPT7P35177 1332 aa2.8□□□□□ -1.96
SSD1YDR293C HEM3P28789 327 aa2.8□□□□□ -1.96
SSD1YDR293C FKH1P40466 484 aa2.8□□□□□ -1.96
SSD1YDR293C RTS3P53289 263 aa2.8□□□□□ -1.96
SSD1YDR293C ALD6P54115 500 aaKnown RBP2.8□□□□□ -1.96
SSD1YDR293C TBF1Q02457 562 aa2.8□□□□□ -1.96
SSD1YDR293C PRS1P32895 427 aaKnown RBP2.79□□□□□ -1.96
SSD1YDR293C NUP192P47054 1683 aa2.79□□□□□ -1.96
SSD1YDR293C MAD1P40957 749 aa2.79□□□□□ -1.96
SSD1YDR293C MTR4P47047 1073 aaKnown RBP2.79□□□□□ -1.96
SSD1YDR293C YRR1Q12172 810 aa2.79□□□□□ -1.96
SSD1YDR293C DAL5P15365 543 aa2.78□□□□□ -1.96
SSD1YDR293C PDI1P17967 522 aaKnown RBP2.78□□□□□ -1.96
SSD1YDR293C FOX2Q02207 900 aaKnown RBP2.78□□□□□ -1.96
SSD1YDR293C PUN1Q06991 263 aa2.78□□□□□ -1.96
SSD1YDR293C KEX2P13134 814 aa2.78□□□□□ -1.96
SSD1YDR293C RGR1P19263 1082 aa2.78□□□□□ -1.96
SSD1YDR293C PAM1P37304 830 aaKnown RBP2.78□□□□□ -1.96
SSD1YDR293C CST6P40535 587 aa2.78□□□□□ -1.96
SSD1YDR293C KIP3P53086 805 aaKnown RBP2.78□□□□□ -1.96
SSD1YDR293C PRP43P53131 767 aaKnown RBP2.78□□□□□ -1.96
SSD1YDR293C YGR273CP53329 174 aa2.78□□□□□ -1.96
SSD1YDR293C SPR28Q04921 423 aa2.78□□□□□ -1.96
SSD1YDR293C ERF2Q06551 359 aa2.78□□□□□ -1.96
SSD1YDR293C RAD2P07276 1031 aa2.77□□□□□ -1.97
SSD1YDR293C PRI2P20457 528 aa2.77□□□□□ -1.97
SSD1YDR293C TAF5P38129 798 aa2.77□□□□□ -1.97
SSD1YDR293C MAM1P40065 302 aa2.77□□□□□ -1.97
SSD1YDR293C EMP47P43555 445 aa2.77□□□□□ -1.97
SSD1YDR293C ILV3P39522 585 aaKnown RBP2.77□□□□□ -1.97
SSD1YDR293C YIR014WP40570 242 aa2.77□□□□□ -1.97
SSD1YDR293C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
SSD1YDR293C TPS3P38426 1054 aaKnown RBP2.77□□□□□ -1.97
SSD1YDR293C GUT1P32190 709 aa2.76□□□□□ -1.97
SSD1YDR293C SEN54Q02825 467 aaPredicted RBP2.76□□□□□ -1.97
SSD1YDR293C LAM6Q08001 693 aa2.76□□□□□ -1.97
SSD1YDR293C PDR11P40550 1411 aa2.76□□□□□ -1.97
SSD1YDR293C LEU2P04173 364 aaPredicted RBP2.76□□□□□ -1.97
SSD1YDR293C MVP1P40959 511 aaKnown RBP2.76□□□□□ -1.97
SSD1YDR293C EAF7P53911 425 aaKnown RBP2.76□□□□□ -1.97
SSD1YDR293C TRM1P15565 570 aaKnown RBP2.75□□□□□ -1.97
SSD1YDR293C PEX29Q03370 554 aa2.75□□□□□ -1.97
SSD1YDR293C LYS2P07702 1392 aa2.75□□□□□ -1.97
SSD1YDR293C RPO41P13433 1351 aaKnown RBP2.75□□□□□ -1.97
SSD1YDR293C KRE5P22023 1365 aa2.75□□□□□ -1.97
SSD1YDR293C PSE1P32337 1089 aaKnown RBP2.75□□□□□ -1.97
SSD1YDR293C GCD11P32481 527 aaKnown RBP2.75□□□□□ -1.97
SSD1YDR293C EBP2P36049 427 aaKnown RBP2.75□□□□□ -1.97
SSD1YDR293C CHZ1P40019 153 aaPredicted RBP2.75□□□□□ -1.97
SSD1YDR293C MID1P41821 548 aa2.75□□□□□ -1.97
SSD1YDR293C SPC42P36094 363 aa2.75□□□□□ -1.97
SSD1YDR293C FYV10P40492 516 aa2.75□□□□□ -1.97
SSD1YDR293C SVF1Q05515 481 aa2.75□□□□□ -1.97
SSD1YDR293C CDC53Q12018 815 aaKnown RBP2.75□□□□□ -1.97
SSD1YDR293C KAR2P16474 682 aaKnown RBP2.74□□□□□ -1.97
SSD1YDR293C SOL3P38858 249 aa2.74□□□□□ -1.97
SSD1YDR293C STM1P39015 273 aaKnown RBP2.74□□□□□ -1.97
SSD1YDR293C TAF8Q03750 510 aa2.74□□□□□ -1.97
SSD1YDR293C SOH1P38633 127 aa2.74□□□□□ -1.97
SSD1YDR293C MNN4P36044 1178 aa2.74□□□□□ -1.97
SSD1YDR293C ORC6P38826 435 aa2.74□□□□□ -1.97
SSD1YDR293C ALD3P54114 506 aa2.73□□□□□ -1.97
SSD1YDR293C PNP1Q05788 311 aa2.73□□□□□ -1.97
SSD1YDR293C FUR4P05316 633 aaKnown RBP2.73□□□□□ -1.97
SSD1YDR293C MIP1P15801 1254 aa2.73□□□□□ -1.97
SSD1YDR293C TPM1P17536 199 aaKnown RBP2.73□□□□□ -1.97
SSD1YDR293C MAK10Q02197 733 aa2.73□□□□□ -1.97
SSD1YDR293C LSP1Q12230 341 aaKnown RBP2.73□□□□□ -1.97
SSD1YDR293C WHI5Q12416 295 aa2.73□□□□□ -1.97
SSD1YDR293C YDL206WQ12424 762 aa2.73□□□□□ -1.97
SSD1YDR293C MLP1Q02455 1875 aaKnown RBP2.73□□□□□ -1.97
SSD1YDR293C PDR18P53756 1333 aa2.73□□□□□ -1.97
SSD1YDR293C SUP45P12385 437 aaKnown RBP2.73□□□□□ -1.97
SSD1YDR293C MDG1P53885 366 aa2.73□□□□□ -1.97
SSD1YDR293C MGE1P38523 228 aa2.72□□□□□ -1.97
SSD1YDR293C RTR1P40084 226 aaPredicted RBP2.72□□□□□ -1.97
SSD1YDR293C YDL144CQ07589 356 aa2.72□□□□□ -1.97
SSD1YDR293C MCM16Q12262 181 aa2.72□□□□□ -1.97
SSD1YDR293C GAL2P13181 574 aa2.72□□□□□ -1.97
SSD1YDR293C UGA3P26370 528 aa2.72□□□□□ -1.97
SSD1YDR293C SUT1P53032 299 aaKnown RBP2.72□□□□□ -1.97
SSD1YDR293C WRS1Q12109 432 aaKnown RBP2.72□□□□□ -1.97
SSD1YDR293C RAD9P14737 1309 aa2.72□□□□□ -1.97
SSD1YDR293C SUP35P05453 685 aaKnown RBP2.72□□□□□ -1.97
SSD1YDR293C YNL050CP53952 270 aa2.72□□□□□ -1.97
SSD1YDR293C ETT1Q08421 412 aaKnown RBP2.72□□□□□ -1.97
SSD1YDR293C YAP5P40574 245 aa2.71□□□□□ -1.98
SSD1YDR293C MTO1P53070 669 aa2.71□□□□□ -1.98
SSD1YDR293C HST2P53686 357 aa2.71□□□□□ -1.98
SSD1YDR293C COG8Q04632 607 aa2.71□□□□□ -1.98
SSD1YDR293C RRP5Q05022 1729 aaKnown RBP2.71□□□□□ -1.98
SSD1YDR293C RPT1P33299 467 aaKnown RBP2.71□□□□□ -1.98
SSD1YDR293C SLI15P38283 698 aa2.71□□□□□ -1.98
SSD1YDR293C RIM21P48565 533 aa2.71□□□□□ -1.98
SSD1YDR293C FAR11P53917 953 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms