RNA–Protein interactions for RNA: YDR002W

YRB1, Transcript of Ran GTPase binding protein, yeast

Gene YRB1, Length 606 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRB1	YDR002W	FRA1	Q07825	749 aa		4.85	□□□□□ -1.63
YRB1	YDR002W	ATF2	P53296	535 aa		4.84	□□□□□ -1.63
YRB1	YDR002W	TY1A-DR2	Q03964	440 aa	Known RBP	4.84	□□□□□ -1.63
YRB1	YDR002W	IRE1	P32361	1115 aa		4.82	□□□□□ -1.64
YRB1	YDR002W	SPT2	P06843	333 aa	Predicted RBP	4.81	□□□□□ -1.64
YRB1	YDR002W	KTR1	P27810	393 aa	Known RBP	4.81	□□□□□ -1.64
YRB1	YDR002W	SPR3	P41901	512 aa		4.81	□□□□□ -1.64
YRB1	YDR002W	JJJ2	P46997	583 aa		4.81	□□□□□ -1.64
YRB1	YDR002W	BUD9	P53226	547 aa		4.81	□□□□□ -1.64
YRB1	YDR002W	DAT1	P13483	248 aa	Known RBP	4.8	□□□□□ -1.64
YRB1	YDR002W	SPB4	P25808	606 aa	Predicted RBP	4.79	□□□□□ -1.64
YRB1	YDR002W	ELM1	P32801	640 aa		4.79	□□□□□ -1.64
YRB1	YDR002W	PGM1	P33401	570 aa	Known RBP	4.79	□□□□□ -1.64
YRB1	YDR002W	ALA1	P40825	983 aa	Known RBP	4.79	□□□□□ -1.64
YRB1	YDR002W	STB3	Q12427	513 aa		4.79	□□□□□ -1.64
YRB1	YDR002W	UTR2	P32623	467 aa		4.77	□□□□□ -1.65
YRB1	YDR002W	SHM1	P37292	490 aa	Predicted RBP	4.77	□□□□□ -1.65
YRB1	YDR002W	UTP7	P40055	554 aa	Known RBP	4.77	□□□□□ -1.65
YRB1	YDR002W	SUM1	P46676	1062 aa		4.77	□□□□□ -1.65
YRB1	YDR002W	STE20	Q03497	939 aa	Known RBP	4.77	□□□□□ -1.65
YRB1	YDR002W	PSH1	Q12161	406 aa		4.77	□□□□□ -1.65
YRB1	YDR002W	NHA1	Q99271	985 aa		4.77	□□□□□ -1.65
YRB1	YDR002W	PDC6	P26263	563 aa	Known RBP	4.76	□□□□□ -1.65
YRB1	YDR002W	TBS1	P38114	1094 aa		4.76	□□□□□ -1.65
YRB1	YDR002W	MED7	Q08278	222 aa		4.76	□□□□□ -1.65
YRB1	YDR002W	RAD59	Q12223	238 aa		4.75	□□□□□ -1.65
YRB1	YDR002W	AI3	P03877	415 aa		4.74	□□□□□ -1.65
YRB1	YDR002W	ISR1	Q06098	443 aa	Known RBP	4.74	□□□□□ -1.65
YRB1	YDR002W	RPP1A	P05318	106 aa	Predicted RBP	4.73	□□□□□ -1.65
YRB1	YDR002W	YKR073C	P36153	106 aa		4.73	□□□□□ -1.65
YRB1	YDR002W	MSC7	P38694	644 aa		4.73	□□□□□ -1.65
YRB1	YDR002W	PGM2	P37012	569 aa	Known RBP	4.72	□□□□□ -1.65
YRB1	YDR002W	TRP3	P00937	484 aa		4.71	□□□□□ -1.66
YRB1	YDR002W	MAK16	P10962	306 aa	Predicted RBP	4.71	□□□□□ -1.66
YRB1	YDR002W	SAC7	P17121	654 aa		4.71	□□□□□ -1.66
YRB1	YDR002W	LIP5	P32875	414 aa		4.71	□□□□□ -1.66
YRB1	YDR002W	ALG14	P38242	237 aa		4.71	□□□□□ -1.66
YRB1	YDR002W	GIS1	Q03833	894 aa		4.71	□□□□□ -1.66
YRB1	YDR002W	UBP5	P39944	805 aa		4.7	□□□□□ -1.66
YRB1	YDR002W	ARI1	P53111	347 aa	Known RBP	4.7	□□□□□ -1.66
YRB1	YDR002W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
YRB1	YDR002W	KAE1	P36132	386 aa		4.69	□□□□□ -1.66
YRB1	YDR002W	CSN12	P47130	423 aa		4.69	□□□□□ -1.66
YRB1	YDR002W	APL6	P46682	809 aa		4.68	□□□□□ -1.66
YRB1	YDR002W	MRX12	P47084	519 aa		4.68	□□□□□ -1.66
YRB1	YDR002W	CTH1	P47976	325 aa		4.68	□□□□□ -1.66
YRB1	YDR002W	SAS10	Q12136	610 aa	Predicted RBP	4.68	□□□□□ -1.66
YRB1	YDR002W	RPS31	P05759	152 aa	Known RBP	4.67	□□□□□ -1.66
YRB1	YDR002W	LEU1	P07264	779 aa	Known RBP	4.67	□□□□□ -1.66
YRB1	YDR002W	COQ2	P32378	372 aa		4.67	□□□□□ -1.66
YRB1	YDR002W	TOS1	P38288	455 aa		4.66	□□□□□ -1.66
YRB1	YDR002W	SLX8	P40072	274 aa		4.66	□□□□□ -1.66
YRB1	YDR002W	BRE4	Q07660	1125 aa		4.65	□□□□□ -1.67
YRB1	YDR002W	GAS5	Q08193	484 aa		4.65	□□□□□ -1.67
YRB1	YDR002W	YLR122C	Q12312	125 aa		4.65	□□□□□ -1.67
YRB1	YDR002W	SFA1	P32771	386 aa		4.64	□□□□□ -1.67
YRB1	YDR002W	YNR021W	P53723	404 aa	Known RBP	4.63	□□□□□ -1.67
YRB1	YDR002W	NAR1	P23503	491 aa	Known RBP	4.62	□□□□□ -1.67
YRB1	YDR002W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
YRB1	YDR002W	GLC3	P32775	704 aa		4.62	□□□□□ -1.67
YRB1	YDR002W	HAL5	P38970	855 aa	Known RBP	4.62	□□□□□ -1.67
YRB1	YDR002W	HEH2	Q03281	663 aa		4.62	□□□□□ -1.67
YRB1	YDR002W	RGP1	P16664	663 aa		4.61	□□□□□ -1.67
YRB1	YDR002W	RRM3	P38766	723 aa		4.61	□□□□□ -1.67
YRB1	YDR002W	ALD2	P47771	506 aa		4.61	□□□□□ -1.67
YRB1	YDR002W	GIS4	Q04233	774 aa		4.61	□□□□□ -1.67
YRB1	YDR002W	EMP47	P43555	445 aa		4.6	□□□□□ -1.67
YRB1	YDR002W	YCR015C	P25616	317 aa		4.59	□□□□□ -1.67
YRB1	YDR002W	PRK1	P40494	810 aa		4.59	□□□□□ -1.67
YRB1	YDR002W	MCM16	Q12262	181 aa		4.59	□□□□□ -1.67
YRB1	YDR002W	RNQ1	P25367	405 aa		4.58	□□□□□ -1.68
YRB1	YDR002W	YPQ2	Q06328	317 aa		4.58	□□□□□ -1.68
YRB1	YDR002W	MAG2	Q06436	670 aa	Known RBP	4.58	□□□□□ -1.68
YRB1	YDR002W	HPC2	Q01448	625 aa		4.57	□□□□□ -1.68
YRB1	YDR002W	HDA3	Q06623	655 aa		4.57	□□□□□ -1.68
YRB1	YDR002W	CHS2	P14180	963 aa		4.56	□□□□□ -1.68
YRB1	YDR002W	YGR130C	P53278	816 aa		4.56	□□□□□ -1.68
YRB1	YDR002W	YKL222C	P35995	705 aa		4.55	□□□□□ -1.68
YRB1	YDR002W	SAF1	P38352	637 aa		4.55	□□□□□ -1.68
YRB1	YDR002W	RSC6	P25632	483 aa		4.54	□□□□□ -1.68
YRB1	YDR002W	ISF1	P32488	338 aa		4.54	□□□□□ -1.68
YRB1	YDR002W	YTA6	P40328	754 aa		4.54	□□□□□ -1.68
YRB1	YDR002W	AIM7	Q12156	149 aa		4.54	□□□□□ -1.68
YRB1	YDR002W	UTP13	Q05946	817 aa	Known RBP	4.53	□□□□□ -1.68
YRB1	YDR002W	NGR1	P32831	672 aa	Known RBP	4.52	□□□□□ -1.69
YRB1	YDR002W	YNL165W	P53891	406 aa		4.51	□□□□□ -1.69
YRB1	YDR002W	CYC7	P00045	113 aa		4.5	□□□□□ -1.69
YRB1	YDR002W	SPO74	P45819	413 aa		4.5	□□□□□ -1.69
YRB1	YDR002W	TFB3	Q03290	321 aa		4.5	□□□□□ -1.69
YRB1	YDR002W	SOH1	P38633	127 aa		4.49	□□□□□ -1.69
YRB1	YDR002W	NIT1	P40447	199 aa		4.49	□□□□□ -1.69
YRB1	YDR002W	SWI5	P08153	709 aa		4.48	□□□□□ -1.69
YRB1	YDR002W	NCL1	P38205	684 aa	Known RBP	4.48	□□□□□ -1.69
YRB1	YDR002W	ATG3	P40344	310 aa		4.48	□□□□□ -1.69
YRB1	YDR002W	SLP1	Q12232	587 aa		4.48	□□□□□ -1.69
YRB1	YDR002W	SSA2	P10592	639 aa	Known RBP	4.47	□□□□□ -1.69
YRB1	YDR002W	MCM1	P11746	286 aa		4.47	□□□□□ -1.69
YRB1	YDR002W	CSE4	P36012	229 aa		4.47	□□□□□ -1.69
YRB1	YDR002W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	not detected
YRB1	YDR002W	SPT5	P27692	1063 aa	Known RBP	4.46	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 87.7 ms