RNA–Protein interactions for RNA: YDL204W

RTN2, Transcript of Reticulon protein, yeast

Gene RTN2, Length 1,182 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTN2	YDL204W	DUR1,2	P32528	1835 aa	Known RBP	11.9	□□□□□ -0.5
RTN2	YDL204W	COB	P00163	385 aa		11.89	□□□□□ -0.51
RTN2	YDL204W	APL2	P36000	726 aa	Predicted RBP	11.89	□□□□□ -0.51
RTN2	YDL204W	MLC1	P53141	149 aa		11.89	□□□□□ -0.51
RTN2	YDL204W	HXT17	P53631	564 aa		11.89	□□□□□ -0.51
RTN2	YDL204W	UTP10	P42945	1769 aa	Known RBP	11.89	□□□□□ -0.51
RTN2	YDL204W	SUP35	P05453	685 aa	Known RBP	11.88	□□□□□ -0.51
RTN2	YDL204W	NOT3	P06102	836 aa	Known RBP	11.88	□□□□□ -0.51
RTN2	YDL204W	SET1	P38827	1080 aa	Known RBP	11.88	□□□□□ -0.51
RTN2	YDL204W	YFR006W	P43590	535 aa		11.88	□□□□□ -0.51
RTN2	YDL204W	COG8	Q04632	607 aa		11.88	□□□□□ -0.51
RTN2	YDL204W	FPR4	Q06205	392 aa	Predicted RBP	11.88	□□□□□ -0.51
RTN2	YDL204W	BRE1	Q07457	700 aa	Known RBP	11.88	□□□□□ -0.51
RTN2	YDL204W	RMD1	Q03441	430 aa		11.87	□□□□□ -0.51
RTN2	YDL204W	PHM7	Q12252	991 aa		11.87	□□□□□ -0.51
RTN2	YDL204W	FOX2	Q02207	900 aa	Known RBP	11.86	□□□□□ -0.51
RTN2	YDL204W	YPR204W	Q08995	1032 aa		11.86	□□□□□ -0.51
RTN2	YDL204W	PSH1	Q12161	406 aa		11.86	□□□□□ -0.51
RTN2	YDL204W	ARL1	P38116	183 aa	Known RBP	11.85	□□□□□ -0.51
RTN2	YDL204W	SLN1	P39928	1220 aa	Predicted RBP	11.85	□□□□□ -0.51
RTN2	YDL204W	KRI1	P42846	591 aa	Known RBP	11.85	□□□□□ -0.51
RTN2	YDL204W	LAM6	Q08001	693 aa		11.85	□□□□□ -0.51
RTN2	YDL204W	DOT5	P40553	215 aa		11.84	□□□□□ -0.51
RTN2	YDL204W	MTC5	Q03897	1148 aa		11.84	□□□□□ -0.51
RTN2	YDL204W	TUM1	Q08686	304 aa	Known RBP	11.84	□□□□□ -0.51
RTN2	YDL204W	RIM20	Q12033	661 aa		11.84	□□□□□ -0.51
RTN2	YDL204W	TPM1	P17536	199 aa	Known RBP	11.83	□□□□□ -0.52
RTN2	YDL204W	TEA1	P47988	759 aa		11.83	□□□□□ -0.52
RTN2	YDL204W	YGL242C	P53066	181 aa		11.83	□□□□□ -0.52
RTN2	YDL204W	VPS20	Q04272	221 aa		11.83	□□□□□ -0.52
RTN2	YDL204W	ARG8	P18544	423 aa		11.82	□□□□□ -0.52
RTN2	YDL204W	YPR148C	Q06523	435 aa		11.82	□□□□□ -0.52
RTN2	YDL204W	PRP40	P33203	583 aa	Known RBP	11.81	□□□□□ -0.52
RTN2	YDL204W	YKR075C	P36155	307 aa		11.81	□□□□□ -0.52
RTN2	YDL204W	AAP1	P37898	856 aa	Known RBP	11.81	□□□□□ -0.52
RTN2	YDL204W	NPA3	P47122	385 aa		11.81	□□□□□ -0.52
RTN2	YDL204W	MRPS35	P53292	345 aa		11.81	□□□□□ -0.52
RTN2	YDL204W	BIK1	P11709	440 aa		11.8	□□□□□ -0.52
RTN2	YDL204W	STM1	P39015	273 aa	Known RBP	11.8	□□□□□ -0.52
RTN2	YDL204W	YGL082W	P53155	381 aa		11.8	□□□□□ -0.52
RTN2	YDL204W	TRL1	P09880	827 aa	Known RBP	11.79	□□□□□ -0.52
RTN2	YDL204W	SLA1	P32790	1244 aa		11.79	□□□□□ -0.52
RTN2	YDL204W	SER1	P33330	395 aa	Known RBP	11.79	□□□□□ -0.52
RTN2	YDL204W	YGL081W	P53156	320 aa		11.79	□□□□□ -0.52
RTN2	YDL204W	ALO1	P54783	526 aa	Known RBP	11.79	□□□□□ -0.52
RTN2	YDL204W	HAP5	Q02516	242 aa		11.79	□□□□□ -0.52
RTN2	YDL204W	FCP1	Q03254	732 aa		11.79	□□□□□ -0.52
RTN2	YDL204W	SNU66	Q12420	587 aa	Predicted RBP	11.79	□□□□□ -0.52
RTN2	YDL204W	BDH2	P39713	417 aa		11.78	□□□□□ -0.52
RTN2	YDL204W	YJL181W	P46987	611 aa		11.78	□□□□□ -0.52
RTN2	YDL204W	HST1	P53685	503 aa		11.78	□□□□□ -0.52
RTN2	YDL204W	GYP5	Q12344	894 aa		11.78	□□□□□ -0.52
RTN2	YDL204W	SSK22	P25390	1331 aa	Predicted RBP	11.78	□□□□□ -0.52
RTN2	YDL204W	SAC3	P46674	1301 aa		11.78	□□□□□ -0.52
RTN2	YDL204W	KTR1	P27810	393 aa	Known RBP	11.77	□□□□□ -0.53
RTN2	YDL204W	HXT10	P43581	546 aa		11.77	□□□□□ -0.53
RTN2	YDL204W	OSH3	P38713	996 aa	Known RBP	11.76	□□□□□ -0.53
RTN2	YDL204W	MSB4	Q12317	492 aa		11.76	□□□□□ -0.53
RTN2	YDL204W	DCD1	P06773	312 aa		11.75	□□□□□ -0.53
RTN2	YDL204W	KTR3	P38130	404 aa	Predicted RBP	11.75	□□□□□ -0.53
RTN2	YDL204W	PBY1	P38254	753 aa		11.75	□□□□□ -0.53
RTN2	YDL204W	SPO22	P40511	975 aa		11.75	□□□□□ -0.53
RTN2	YDL204W	KEX1	P09620	729 aa		11.74	□□□□□ -0.53
RTN2	YDL204W	RPL19A	P0CX82	189 aa	Known RBP	11.73	□□□□□ -0.53
RTN2	YDL204W	RPL19B	P0CX83	189 aa	Predicted RBP	11.73	□□□□□ -0.53
RTN2	YDL204W	PEX14	P53112	341 aa		11.73	□□□□□ -0.53
RTN2	YDL204W	HRQ1	Q05549	1077 aa		11.73	□□□□□ -0.53
RTN2	YDL204W	AIM9	P40053	627 aa	Known RBP	11.72	□□□□□ -0.53
RTN2	YDL204W	YIL055C	P40523	627 aa	Known RBP	11.72	□□□□□ -0.53
RTN2	YDL204W	TTI1	P36097	1038 aa		11.71	□□□□□ -0.53
RTN2	YDL204W	GRE2	Q12068	342 aa	Known RBP	11.71	□□□□□ -0.53
RTN2	YDL204W	RSM25	P40496	264 aa		11.7	□□□□□ -0.54
RTN2	YDL204W	EPS1	P40557	701 aa		11.7	□□□□□ -0.54
RTN2	YDL204W	HYR1	P40581	163 aa	Known RBP	11.7	□□□□□ -0.54
RTN2	YDL204W	RPN11	P43588	306 aa	Known RBP	11.7	□□□□□ -0.54
RTN2	YDL204W	TSR3	Q12094	313 aa	Known RBP	11.7	□□□□□ -0.54
RTN2	YDL204W	HAT1	Q12341	374 aa		11.7	□□□□□ -0.54
RTN2	YDL204W	AIM44	Q99299	758 aa		11.7	□□□□□ -0.54
RTN2	YDL204W	AI2	P03876	854 aa		11.69	□□□□□ -0.54
RTN2	YDL204W	SEC18	P18759	758 aa	Known RBP	11.69	□□□□□ -0.54
RTN2	YDL204W	KNS1	P32350	737 aa	Predicted RBP	11.69	□□□□□ -0.54
RTN2	YDL204W	SIS2	P36024	562 aa		11.69	□□□□□ -0.54
RTN2	YDL204W	RVS167	P39743	482 aa	Known RBP	11.69	□□□□□ -0.54
RTN2	YDL204W	ENP2	P48234	707 aa	Known RBP	11.69	□□□□□ -0.54
RTN2	YDL204W	YNL193W	P53870	558 aa		11.69	□□□□□ -0.54
RTN2	YDL204W	ARP5	P53946	755 aa		11.69	□□□□□ -0.54
RTN2	YDL204W	UBP16	Q02863	499 aa		11.69	□□□□□ -0.54
RTN2	YDL204W	NYV1	Q12255	253 aa		11.69	□□□□□ -0.54
RTN2	YDL204W	RRI2	Q12348	645 aa		11.69	□□□□□ -0.54
RTN2	YDL204W	CIR1	P42940	261 aa		11.68	□□□□□ -0.54
RTN2	YDL204W	RPN7	Q06103	429 aa	Known RBP	11.68	□□□□□ -0.54
RTN2	YDL204W	PEX19	Q07418	342 aa		11.68	□□□□□ -0.54
RTN2	YDL204W	OPI1	P21957	404 aa		11.67	□□□□□ -0.54
RTN2	YDL204W	RPN12	P32496	274 aa		11.67	□□□□□ -0.54
RTN2	YDL204W	CIC1	P38779	376 aa	Known RBP	11.67	□□□□□ -0.54
RTN2	YDL204W	CWH41	P53008	833 aa		11.67	□□□□□ -0.54
RTN2	YDL204W	PIB2	P53191	635 aa		11.67	□□□□□ -0.54
RTN2	YDL204W	PIL1	P53252	339 aa	Known RBP	11.67	□□□□□ -0.54
RTN2	YDL204W	LCD1	Q04377	747 aa		11.67	□□□□□ -0.54
RTN2	YDL204W	ADR1	P07248	1323 aa		11.66	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 125.1 ms