RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W YBL036CP38197 257 aa4.45□□□□□ -1.7
MCD1YDL003W SPT5P27692 1063 aaKnown RBP4.44□□□□□ -1.7
MCD1YDL003W BOI2P39969 1040 aa4.44□□□□□ -1.7
MCD1YDL003W MCM16Q12262 181 aa4.44□□□□□ -1.7
MCD1YDL003W TY1A-DR3Q12441 440 aa4.44□□□□□ -1.7
MCD1YDL003W IRE1P32361 1115 aa4.43□□□□□ -1.7
MCD1YDL003W MET1P36150 593 aa4.43□□□□□ -1.7
MCD1YDL003W ATG3P40344 310 aa4.43□□□□□ -1.7
MCD1YDL003W SUM1P46676 1062 aa4.43□□□□□ -1.7
MCD1YDL003W MCX1P38323 520 aaPredicted RBP4.43□□□□□ -1.7
MCD1YDL003W GPM1P00950 247 aaKnown RBP4.41□□□□□ -1.7
MCD1YDL003W MRPL16P38064 232 aa4.41□□□□□ -1.7
MCD1YDL003W GUA1P38625 525 aaKnown RBP4.41□□□□□ -1.7
MCD1YDL003W SOH1P38633 127 aa4.41□□□□□ -1.7
MCD1YDL003W JJJ2P46997 583 aa4.41□□□□□ -1.7
MCD1YDL003W YDJ1P25491 409 aaKnown RBP4.41□□□□□ -1.7
MCD1YDL003W BRL1P38770 471 aa4.4□□□□□ -1.71
MCD1YDL003W HAL5P38970 855 aaKnown RBP4.4□□□□□ -1.71
MCD1YDL003W APL6P46682 809 aa4.4□□□□□ -1.71
MCD1YDL003W HDA3Q06623 655 aa4.4□□□□□ -1.71
MCD1YDL003W TAT1P38085 619 aa4.39□□□□□ -1.71
MCD1YDL003W STB3Q12427 513 aa4.39□□□□□ -1.71
MCD1YDL003W SLX8P40072 274 aa4.38□□□□□ -1.71
MCD1YDL003W YPP1P46951 817 aa4.38□□□□□ -1.71
MCD1YDL003W UTP13Q05946 817 aaKnown RBP4.38□□□□□ -1.71
MCD1YDL003W LSB6P42951 607 aa4.38□□□□□ -1.71
MCD1YDL003W YCK2P23292 546 aaKnown RBP4.37□□□□□ -1.71
MCD1YDL003W SLN1P39928 1220 aaPredicted RBP4.37□□□□□ -1.71
MCD1YDL003W TFB3Q03290 321 aa4.37□□□□□ -1.71
MCD1YDL003W PDC6P26263 563 aaKnown RBP4.35□□□□□ -1.71
MCD1YDL003W KNS1P32350 737 aaPredicted RBP4.35□□□□□ -1.71
MCD1YDL003W SHM1P37292 490 aaPredicted RBP4.35□□□□□ -1.71
MCD1YDL003W HPC2Q01448 625 aa4.35□□□□□ -1.71
MCD1YDL003W PSH1Q12161 406 aa4.35□□□□□ -1.71
MCD1YDL003W YDR215CQ12240 137 aa4.35□□□□□ -1.71
MCD1YDL003W RPP1AP05318 106 aaPredicted RBP4.35□□□□□ -1.71
MCD1YDL003W MAC1P35192 417 aa4.35□□□□□ -1.71
MCD1YDL003W AMN1P38285 549 aaPredicted RBP4.35□□□□□ -1.71
MCD1YDL003W MCA1Q08601 432 aa4.35□□□□□ -1.71
MCD1YDL003W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
MCD1YDL003W PDC5P16467 563 aaKnown RBP4.34□□□□□ -1.71
MCD1YDL003W RPN1P38764 993 aaKnown RBP4.34□□□□□ -1.71
MCD1YDL003W SPR3P41901 512 aa4.34□□□□□ -1.71
MCD1YDL003W YTA6P40328 754 aa4.33□□□□□ -1.72
MCD1YDL003W YNL108CP53929 270 aa4.32□□□□□ -1.72
MCD1YDL003W TY1A-DR2Q03964 440 aaKnown RBP4.32□□□□□ -1.72
MCD1YDL003W SWI5P08153 709 aa4.32□□□□□ -1.72
MCD1YDL003W RQC2Q12532 1038 aaKnown RBP4.32□□□□□ -1.72
MCD1YDL003W YFL034WP43564 1073 aa4.31□□□□□ -1.72
MCD1YDL003W PRY1P47032 299 aa4.31□□□□□ -1.72
MCD1YDL003W RPS31P05759 152 aaKnown RBP4.3□□□□□ -1.72
MCD1YDL003W PKC1P24583 1151 aa4.3□□□□□ -1.72
MCD1YDL003W ENO2P00925 437 aaKnown RBP4.29□□□□□ -1.72
MCD1YDL003W AIM9P40053 627 aaKnown RBP4.29□□□□□ -1.72
MCD1YDL003W LEU1P07264 779 aaKnown RBP4.29□□□□□ -1.72
MCD1YDL003W SUP45P12385 437 aaKnown RBP4.29□□□□□ -1.72
MCD1YDL003W YPL034WQ03083 165 aa4.29□□□□□ -1.72
MCD1YDL003W LEU3P08638 886 aa4.28□□□□□ -1.72
MCD1YDL003W RPS6AP0CX37 236 aaKnown RBP4.28□□□□□ -1.72
MCD1YDL003W RPS6BP0CX38 236 aaPredicted RBP4.28□□□□□ -1.72
MCD1YDL003W RGP1P16664 663 aa4.28□□□□□ -1.72
MCD1YDL003W NTH2P35172 780 aa4.28□□□□□ -1.72
MCD1YDL003W YPQ2Q06328 317 aa4.28□□□□□ -1.72
MCD1YDL003W GLT1Q12680 2145 aaKnown RBP4.28□□□□□ -1.73
MCD1YDL003W BIO2P32451 375 aa4.27□□□□□ -1.73
MCD1YDL003W ALO1P54783 526 aaKnown RBP4.27□□□□□ -1.73
MCD1YDL003W NHA1Q99271 985 aa4.27□□□□□ -1.73
MCD1YDL003W TPS3P38426 1054 aaKnown RBP4.26□□□□□ -1.73
MCD1YDL003W Q0182Q9ZZW1 134 aa4.26□□□□□ -1.73
MCD1YDL003W NAB2P32505 525 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73 RIP-Chip
MCD1YDL003W OMA1P36163 345 aa4.26□□□□□ -1.73
MCD1YDL003W ALG14P38242 237 aa4.26□□□□□ -1.73
MCD1YDL003W HEH2Q03281 663 aa4.26□□□□□ -1.73
MCD1YDL003W PDI1P17967 522 aaKnown RBP4.25□□□□□ -1.73
MCD1YDL003W MSC7P38694 644 aa4.25□□□□□ -1.73
MCD1YDL003W MCM1P11746 286 aa4.24□□□□□ -1.73
MCD1YDL003W PGM2P37012 569 aaKnown RBP4.24□□□□□ -1.73
MCD1YDL003W YJL007CP47080 104 aa4.24□□□□□ -1.73
MCD1YDL003W ALD2P47771 506 aa4.24□□□□□ -1.73
MCD1YDL003W YNL165WP53891 406 aa4.24□□□□□ -1.73
MCD1YDL003W MLF3P32047 452 aa4.24□□□□□ -1.73
MCD1YDL003W RIM21P48565 533 aa4.24□□□□□ -1.73
MCD1YDL003W MTO1P53070 669 aa4.23□□□□□ -1.73
MCD1YDL003W BUD9P53226 547 aa4.22□□□□□ -1.73
MCD1YDL003W NCL1P38205 684 aaKnown RBP4.21□□□□□ -1.73
MCD1YDL003W TSC13Q99190 310 aa4.21□□□□□ -1.73
MCD1YDL003W CYT1P07143 309 aa4.21□□□□□ -1.74
MCD1YDL003W RDS2P19541 446 aaKnown RBP4.21□□□□□ -1.74
MCD1YDL003W IRC24P40580 263 aa4.21□□□□□ -1.74
MCD1YDL003W PRK1P40494 810 aa4.19□□□□□ -1.74
MCD1YDL003W RPL34BP40525 121 aaKnown RBP4.18□□□□□ -1.74
MCD1YDL003W SAC7P17121 654 aa4.18□□□□□ -1.74
MCD1YDL003W RRM3P38766 723 aa4.18□□□□□ -1.74
MCD1YDL003W INP52P50942 1183 aa4.18□□□□□ -1.74
MCD1YDL003W ENO1P00924 437 aaKnown RBP4.17□□□□□ -1.74
MCD1YDL003W NAR1P23503 491 aaKnown RBP4.17□□□□□ -1.74
MCD1YDL003W COQ2P32378 372 aa4.17□□□□□ -1.74
MCD1YDL003W RTG2P32608 588 aaKnown RBP4.17□□□□□ -1.74
MCD1YDL003W AI3P03877 415 aa4.16□□□□□ -1.74
MCD1YDL003W KAP122P32767 1081 aa4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms