RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W TBS1P38114 1094 aa5.88□□□□□ -1.47
CDC50YCR094W MCX1P38323 520 aaPredicted RBP5.87□□□□□ -1.47
CDC50YCR094W YNR014WP53719 212 aa5.87□□□□□ -1.47
CDC50YCR094W GPM1P00950 247 aaKnown RBP5.86□□□□□ -1.47
CDC50YCR094W SUM1P46676 1062 aa5.86□□□□□ -1.47
CDC50YCR094W YCK2P23292 546 aaKnown RBP5.85□□□□□ -1.47
CDC50YCR094W SPT5P27692 1063 aaKnown RBP5.85□□□□□ -1.47
CDC50YCR094W ALA1P40825 983 aaKnown RBP5.85□□□□□ -1.47
CDC50YCR094W JJJ2P46997 583 aa5.85□□□□□ -1.47
CDC50YCR094W YDJ1P25491 409 aaKnown RBP5.84□□□□□ -1.47
CDC50YCR094W IRE1P32361 1115 aa5.84□□□□□ -1.47
CDC50YCR094W SHM1P37292 490 aaPredicted RBP5.84□□□□□ -1.47
CDC50YCR094W GUA1P38625 525 aaKnown RBP5.84□□□□□ -1.47
CDC50YCR094W GLT1Q12680 2145 aaKnown RBP5.83□□□□□ -1.48
CDC50YCR094W FPS1P23900 669 aa5.83□□□□□ -1.48
CDC50YCR094W SLX8P40072 274 aa5.83□□□□□ -1.48
CDC50YCR094W YBL036CP38197 257 aa5.82□□□□□ -1.48
CDC50YCR094W BOI2P39969 1040 aa5.82□□□□□ -1.48
CDC50YCR094W MRPL16P38064 232 aa5.81□□□□□ -1.48
CDC50YCR094W HDA3Q06623 655 aa5.81□□□□□ -1.48
CDC50YCR094W PSH1Q12161 406 aa5.81□□□□□ -1.48
CDC50YCR094W YDR215CQ12240 137 aa5.81□□□□□ -1.48
CDC50YCR094W SOH1P38633 127 aa5.8□□□□□ -1.48
CDC50YCR094W SLN1P39928 1220 aaPredicted RBP5.8□□□□□ -1.48
CDC50YCR094W UTP13Q05946 817 aaKnown RBP5.8□□□□□ -1.48
CDC50YCR094W PDC6P26263 563 aaKnown RBP5.79□□□□□ -1.48
CDC50YCR094W AMN1P38285 549 aaPredicted RBP5.78□□□□□ -1.48
CDC50YCR094W RPS31P05759 152 aaKnown RBP5.77□□□□□ -1.49
CDC50YCR094W PDC5P16467 563 aaKnown RBP5.77□□□□□ -1.49
CDC50YCR094W STB3Q12427 513 aa5.77□□□□□ -1.49
CDC50YCR094W KNS1P32350 737 aaPredicted RBP5.76□□□□□ -1.49
CDC50YCR094W MET1P36150 593 aa5.76□□□□□ -1.49
CDC50YCR094W ATG3P40344 310 aa5.76□□□□□ -1.49
CDC50YCR094W SPR3P41901 512 aa5.76□□□□□ -1.49
CDC50YCR094W MCA1Q08601 432 aa5.76□□□□□ -1.49
CDC50YCR094W HPC2Q01448 625 aa5.75□□□□□ -1.49
CDC50YCR094W TY1A-DR2Q03964 440 aaKnown RBP5.75□□□□□ -1.49
CDC50YCR094W YPQ2Q06328 317 aa5.75□□□□□ -1.49
CDC50YCR094W LSB6P42951 607 aa5.74□□□□□ -1.49
CDC50YCR094W YPP1P46951 817 aa5.74□□□□□ -1.49
CDC50YCR094W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
CDC50YCR094W BIO2P32451 375 aa5.72□□□□□ -1.49
CDC50YCR094W LEU1P07264 779 aaKnown RBP5.71□□□□□ -1.5
CDC50YCR094W SWI5P08153 709 aa5.71□□□□□ -1.5
CDC50YCR094W SUP45P12385 437 aaKnown RBP5.71□□□□□ -1.5
CDC50YCR094W PKC1P24583 1151 aa5.71□□□□□ -1.5
CDC50YCR094W TAT1P38085 619 aa5.71□□□□□ -1.5
CDC50YCR094W BRL1P38770 471 aa5.71□□□□□ -1.5
CDC50YCR094W TFB3Q03290 321 aa5.71□□□□□ -1.5
CDC50YCR094W MSC7P38694 644 aa5.7□□□□□ -1.5
CDC50YCR094W PRY1P47032 299 aa5.7□□□□□ -1.5
CDC50YCR094W ENO2P00925 437 aaKnown RBP5.69□□□□□ -1.5
CDC50YCR094W LEU3P08638 886 aa5.69□□□□□ -1.5
CDC50YCR094W ALD2P47771 506 aa5.69□□□□□ -1.5
CDC50YCR094W RPN1P38764 993 aaKnown RBP5.68□□□□□ -1.5
CDC50YCR094W YNL165WP53891 406 aa5.68□□□□□ -1.5
CDC50YCR094W YNL108CP53929 270 aa5.68□□□□□ -1.5
CDC50YCR094W RGP1P16664 663 aa5.66□□□□□ -1.5
CDC50YCR094W RDS2P19541 446 aaKnown RBP5.66□□□□□ -1.5
CDC50YCR094W AIM9P40053 627 aaKnown RBP5.66□□□□□ -1.5
CDC50YCR094W YPL034WQ03083 165 aa5.66□□□□□ -1.5
CDC50YCR094W RPS6AP0CX37 236 aaKnown RBP5.65□□□□□ -1.5
CDC50YCR094W RPS6BP0CX38 236 aaPredicted RBP5.65□□□□□ -1.5
CDC50YCR094W RIM21P48565 533 aa5.65□□□□□ -1.5
CDC50YCR094W MCM1P11746 286 aa5.64□□□□□ -1.51
CDC50YCR094W RPP1AP05318 106 aaPredicted RBP5.63□□□□□ -1.51
CDC50YCR094W MAC1P35192 417 aa5.63□□□□□ -1.51
CDC50YCR094W TPS3P38426 1054 aaKnown RBP5.63□□□□□ -1.51
CDC50YCR094W YTA6P40328 754 aa5.63□□□□□ -1.51
CDC50YCR094W NTH2P35172 780 aa5.62□□□□□ -1.51
CDC50YCR094W MLF3P32047 452 aa5.61□□□□□ -1.51
CDC50YCR094W YFL034WP43564 1073 aa5.61□□□□□ -1.51
CDC50YCR094W ALO1P54783 526 aaKnown RBP5.61□□□□□ -1.51
CDC50YCR094W PGM2P37012 569 aaKnown RBP5.6□□□□□ -1.51
CDC50YCR094W BUD9P53226 547 aa5.6□□□□□ -1.51
CDC50YCR094W NHA1Q99271 985 aa5.6□□□□□ -1.51
CDC50YCR094W ALG14P38242 237 aa5.59□□□□□ -1.51
CDC50YCR094W Q0182Q9ZZW1 134 aa5.59□□□□□ -1.51
CDC50YCR094W PRK1P40494 810 aa5.58□□□□□ -1.52
CDC50YCR094W HEH2Q03281 663 aa5.58□□□□□ -1.52
CDC50YCR094W PDI1P17967 522 aaKnown RBP5.57□□□□□ -1.52
CDC50YCR094W INP52P50942 1183 aa5.56□□□□□ -1.52
CDC50YCR094W MRX10Q05648 414 aa5.56□□□□□ -1.52
CDC50YCR094W NAR1P23503 491 aaKnown RBP5.55□□□□□ -1.52
CDC50YCR094W OMA1P36163 345 aa5.55□□□□□ -1.52
CDC50YCR094W TSC13Q99190 310 aa5.55□□□□□ -1.52
CDC50YCR094W YJL007CP47080 104 aa5.54□□□□□ -1.52
CDC50YCR094W MTO1P53070 669 aa5.54□□□□□ -1.52
CDC50YCR094W ENO1P00924 437 aaKnown RBP5.53□□□□□ -1.52
CDC50YCR094W CYT1P07143 309 aa5.53□□□□□ -1.52
CDC50YCR094W SKP1P52286 194 aa5.53□□□□□ -1.52
CDC50YCR094W GIS4Q04233 774 aa5.53□□□□□ -1.52
CDC50YCR094W GAS5Q08193 484 aa5.53□□□□□ -1.52
CDC50YCR094W AI3P03877 415 aa5.52□□□□□ -1.53
CDC50YCR094W NCL1P38205 684 aaKnown RBP5.52□□□□□ -1.53
CDC50YCR094W PGM1P33401 570 aaKnown RBP5.51□□□□□ -1.53
CDC50YCR094W IRC24P40580 263 aa5.51□□□□□ -1.53
CDC50YCR094W CUS1Q02554 436 aaPredicted RBP5.5□□□□□ -1.53
CDC50YCR094W UTP4Q06679 776 aaKnown RBP5.5□□□□□ -1.53
CDC50YCR094W PEP12P32854 288 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms