RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C YJR008WP47085 338 aa8.13□□□□□ -1.11
TDP1YBR223C FRK1Q03002 865 aaPredicted RBP8.13□□□□□ -1.11
TDP1YBR223C BRE1Q07457 700 aaKnown RBP8.13□□□□□ -1.11
TDP1YBR223C BIK1P11709 440 aa8.12□□□□□ -1.11
TDP1YBR223C RIM20Q12033 661 aa8.12□□□□□ -1.11
TDP1YBR223C MLC1P53141 149 aa8.11□□□□□ -1.11
TDP1YBR223C HST1P53685 503 aa8.11□□□□□ -1.11
TDP1YBR223C SSP2Q08646 371 aa8.11□□□□□ -1.11
TDP1YBR223C NOP53Q12080 455 aaKnown RBP8.11□□□□□ -1.11
TDP1YBR223C APL2P36000 726 aaPredicted RBP8.11□□□□□ -1.11
TDP1YBR223C MNN4P36044 1178 aa8.11□□□□□ -1.11
TDP1YBR223C AAP1P37898 856 aaKnown RBP8.1□□□□□ -1.11
TDP1YBR223C YGL242CP53066 181 aa8.1□□□□□ -1.11
TDP1YBR223C PKH1Q03407 766 aa8.1□□□□□ -1.11
TDP1YBR223C RSM25P40496 264 aa8.09□□□□□ -1.11
TDP1YBR223C RSC1P53236 928 aa8.09□□□□□ -1.11
TDP1YBR223C LCD1Q04377 747 aa8.09□□□□□ -1.11
TDP1YBR223C HRQ1Q05549 1077 aa8.09□□□□□ -1.11
TDP1YBR223C YRF1-3P0CX14 1859 aa8.09□□□□□ -1.11
TDP1YBR223C YRF1-7P0CX15 1859 aa8.09□□□□□ -1.11
TDP1YBR223C YRF1-6P53819 1859 aa8.09□□□□□ -1.11
TDP1YBR223C SET1P38827 1080 aaKnown RBP8.08□□□□□ -1.12
TDP1YBR223C CIR1P42940 261 aa8.08□□□□□ -1.12
TDP1YBR223C MRPS35P53292 345 aa8.08□□□□□ -1.12
TDP1YBR223C ENV9Q08651 330 aa8.08□□□□□ -1.12
TDP1YBR223C DUR1,2P32528 1835 aaKnown RBP8.08□□□□□ -1.12
TDP1YBR223C KEX1P09620 729 aa8.07□□□□□ -1.12
TDP1YBR223C RVS167P39743 482 aaKnown RBP8.07□□□□□ -1.12
TDP1YBR223C PIL1P53252 339 aaKnown RBP8.07□□□□□ -1.12
TDP1YBR223C ALO1P54783 526 aaKnown RBP8.07□□□□□ -1.12
TDP1YBR223C YLR271WQ06152 274 aa8.07□□□□□ -1.12
TDP1YBR223C PSH1Q12161 406 aa8.07□□□□□ -1.12
TDP1YBR223C SUP35P05453 685 aaKnown RBP8.07□□□□□ -1.12
TDP1YBR223C RPL19AP0CX82 189 aaKnown RBP8.07□□□□□ -1.12
TDP1YBR223C RPL19BP0CX83 189 aaPredicted RBP8.07□□□□□ -1.12
TDP1YBR223C TPM1P17536 199 aaKnown RBP8.07□□□□□ -1.12
TDP1YBR223C KTR1P27810 393 aaKnown RBP8.07□□□□□ -1.12
TDP1YBR223C RPN12P32496 274 aa8.07□□□□□ -1.12
TDP1YBR223C HYR1P40581 163 aaKnown RBP8.07□□□□□ -1.12
TDP1YBR223C YPR204WQ08995 1032 aa8.07□□□□□ -1.12
TDP1YBR223C SLA1P32790 1244 aa8.06□□□□□ -1.12
TDP1YBR223C RKM3P38222 552 aa8.06□□□□□ -1.12
TDP1YBR223C STM1P39015 273 aaKnown RBP8.06□□□□□ -1.12
TDP1YBR223C TUM1Q08686 304 aaKnown RBP8.06□□□□□ -1.12
TDP1YBR223C AIM9P40053 627 aaKnown RBP8.05□□□□□ -1.12
TDP1YBR223C HXT10P43581 546 aa8.05□□□□□ -1.12
TDP1YBR223C PEX14P53112 341 aa8.05□□□□□ -1.12
TDP1YBR223C MDG1P53885 366 aa8.05□□□□□ -1.12
TDP1YBR223C AIM44Q99299 758 aa8.05□□□□□ -1.12
TDP1YBR223C KTR3P38130 404 aaPredicted RBP8.04□□□□□ -1.12
TDP1YBR223C SPO22P40511 975 aa8.04□□□□□ -1.12
TDP1YBR223C FCP1Q03254 732 aa8.04□□□□□ -1.12
TDP1YBR223C APC11Q12157 165 aa8.04□□□□□ -1.12
TDP1YBR223C ARG8P18544 423 aa8.03□□□□□ -1.12
TDP1YBR223C EBP2P36049 427 aaKnown RBP8.03□□□□□ -1.12
TDP1YBR223C APP1P53933 587 aa8.03□□□□□ -1.12
TDP1YBR223C MTC5Q03897 1148 aa8.03□□□□□ -1.12
TDP1YBR223C PEX19Q07418 342 aa8.03□□□□□ -1.12
TDP1YBR223C PHM7Q12252 991 aa8.03□□□□□ -1.12
TDP1YBR223C GRX1P25373 110 aaKnown RBP8.03□□□□□ -1.12
TDP1YBR223C PIB2P53191 635 aa8.03□□□□□ -1.12
TDP1YBR223C CTR9P89105 1077 aa8.03□□□□□ -1.12
TDP1YBR223C IMH1Q06704 911 aaKnown RBP8.03□□□□□ -1.12
TDP1YBR223C GYP5Q12344 894 aa8.03□□□□□ -1.12
TDP1YBR223C SNU66Q12420 587 aaPredicted RBP8.03□□□□□ -1.12
TDP1YBR223C SSK22P25390 1331 aaPredicted RBP8.03□□□□□ -1.12
TDP1YBR223C COBP00163 385 aa8.02□□□□□ -1.13
TDP1YBR223C PRX1P34227 261 aaKnown RBP8.02□□□□□ -1.13
TDP1YBR223C TTI1P36097 1038 aa8.02□□□□□ -1.13
TDP1YBR223C DID4P36108 232 aa8.02□□□□□ -1.13
TDP1YBR223C MIC60P36112 540 aa8.02□□□□□ -1.13
TDP1YBR223C PBY1P38254 753 aa8.02□□□□□ -1.13
TDP1YBR223C CTF18P49956 741 aa8.02□□□□□ -1.13
TDP1YBR223C ARP5P53946 755 aa8.02□□□□□ -1.13
TDP1YBR223C TSR3Q12094 313 aaKnown RBP8.02□□□□□ -1.13
TDP1YBR223C CWH41P53008 833 aa8.01□□□□□ -1.13
TDP1YBR223C KRE33P53914 1056 aaKnown RBP8.01□□□□□ -1.13
TDP1YBR223C CCT5P40413 562 aaKnown RBP8□□□□□ -1.13
TDP1YBR223C ENT3P47160 408 aa8□□□□□ -1.13
TDP1YBR223C TCB2P48231 1178 aa8□□□□□ -1.13
TDP1YBR223C YGL082WP53155 381 aa8□□□□□ -1.13
TDP1YBR223C DCD1P06773 312 aa8□□□□□ -1.13
TDP1YBR223C SER1P33330 395 aaKnown RBP8□□□□□ -1.13
TDP1YBR223C OSH3P38713 996 aaKnown RBP8□□□□□ -1.13
TDP1YBR223C ETT1Q08421 412 aaKnown RBP8□□□□□ -1.13
TDP1YBR223C AI2P03876 854 aa7.99□□□□□ -1.13
TDP1YBR223C SEC18P18759 758 aaKnown RBP7.99□□□□□ -1.13
TDP1YBR223C CIC1P38779 376 aaKnown RBP7.99□□□□□ -1.13
TDP1YBR223C VID28P40547 921 aa7.99□□□□□ -1.13
TDP1YBR223C EPS1P40557 701 aa7.99□□□□□ -1.13
TDP1YBR223C PSK2Q08217 1101 aa7.99□□□□□ -1.13
TDP1YBR223C YAH1Q12184 172 aaKnown RBP7.99□□□□□ -1.13
TDP1YBR223C RIM15P43565 1770 aa7.99□□□□□ -1.13
TDP1YBR223C MCM2P29469 868 aa7.98□□□□□ -1.13
TDP1YBR223C ELM1P32801 640 aa7.98□□□□□ -1.13
TDP1YBR223C DOT5P40553 215 aa7.98□□□□□ -1.13
TDP1YBR223C FOX2Q02207 900 aaKnown RBP7.98□□□□□ -1.13
TDP1YBR223C RPN7Q06103 429 aaKnown RBP7.98□□□□□ -1.13
TDP1YBR223C PGA3Q12746 312 aaKnown RBP7.98□□□□□ -1.13
TDP1YBR223C CPA2P03965 1118 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms