RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W STE6P12866 1290 aa7.53□□□□□ -1.2
CKS1YBR135W AMS1P22855 1083 aa7.53□□□□□ -1.2
CKS1YBR135W HEM3P28789 327 aa7.53□□□□□ -1.2
CKS1YBR135W DFG5Q05031 458 aa7.52□□□□□ -1.21
CKS1YBR135W FUR4P05316 633 aaKnown RBP7.51□□□□□ -1.21
CKS1YBR135W SEC20P28791 383 aa7.51□□□□□ -1.21
CKS1YBR135W NGR1P32831 672 aaKnown RBP7.51□□□□□ -1.21
CKS1YBR135W GRS1P38088 690 aaKnown RBP7.51□□□□□ -1.21
CKS1YBR135W TBS1P38114 1094 aa7.51□□□□□ -1.21
CKS1YBR135W MDJ2P42834 146 aa7.51□□□□□ -1.21
CKS1YBR135W WTM2Q12206 467 aa7.51□□□□□ -1.21
CKS1YBR135W RPP2BP02400 110 aaKnown RBP7.5□□□□□ -1.21
CKS1YBR135W DAT1P13483 248 aaKnown RBP7.5□□□□□ -1.21
CKS1YBR135W IPL1P38991 367 aa7.5□□□□□ -1.21
CKS1YBR135W CWH41P53008 833 aa7.5□□□□□ -1.21
CKS1YBR135W MSC6Q08818 692 aaKnown RBP7.5□□□□□ -1.21
CKS1YBR135W YHL050CP38721 697 aa7.48□□□□□ -1.21
CKS1YBR135W YHR219WP38900 624 aa7.48□□□□□ -1.21
CKS1YBR135W BDS1Q08347 646 aa7.48□□□□□ -1.21
CKS1YBR135W LSO1Q3E827 93 aa7.48□□□□□ -1.21
CKS1YBR135W RRN6P32786 894 aa7.47□□□□□ -1.21
CKS1YBR135W GLO3P38682 493 aaKnown RBP7.47□□□□□ -1.21
CKS1YBR135W RTT106P40161 455 aa7.47□□□□□ -1.21
CKS1YBR135W QDR1P40475 563 aa7.47□□□□□ -1.21
CKS1YBR135W CLA4P48562 842 aa7.47□□□□□ -1.21
CKS1YBR135W PPX1P38698 397 aa7.46□□□□□ -1.22
CKS1YBR135W ACF4P47129 309 aa7.46□□□□□ -1.22
CKS1YBR135W YPQ2Q06328 317 aa7.46□□□□□ -1.22
CKS1YBR135W MET32Q12041 191 aa7.46□□□□□ -1.22
CKS1YBR135W MCM1P11746 286 aa7.45□□□□□ -1.22
CKS1YBR135W BOI1P38041 980 aaKnown RBP7.45□□□□□ -1.22
CKS1YBR135W YBR197CP38306 217 aa7.45□□□□□ -1.22
CKS1YBR135W CAB1Q04430 367 aa7.45□□□□□ -1.22
CKS1YBR135W SNU71P53207 620 aaKnown RBP7.43□□□□□ -1.22
CKS1YBR135W ASF1P32447 279 aa7.42□□□□□ -1.22
CKS1YBR135W ISC10P32645 267 aa7.42□□□□□ -1.22
CKS1YBR135W HXT5P38695 592 aa7.42□□□□□ -1.22
CKS1YBR135W DLD3P39976 496 aaKnown RBP7.42□□□□□ -1.22
CKS1YBR135W UTP7P40055 554 aaKnown RBP7.42□□□□□ -1.22
CKS1YBR135W SUM1P46676 1062 aa7.42□□□□□ -1.22
CKS1YBR135W FOX2Q02207 900 aaKnown RBP7.42□□□□□ -1.22
CKS1YBR135W NUT2Q06213 157 aa7.42□□□□□ -1.22
CKS1YBR135W FRT1Q99332 602 aa7.42□□□□□ -1.22
CKS1YBR135W CDC4P07834 779 aa7.41□□□□□ -1.22
CKS1YBR135W APC11Q12157 165 aa7.41□□□□□ -1.22
CKS1YBR135W WHI5Q12416 295 aa7.41□□□□□ -1.22
CKS1YBR135W SPR3P41901 512 aa7.4□□□□□ -1.22
CKS1YBR135W RRP15Q06511 250 aaPredicted RBP7.4□□□□□ -1.22
CKS1YBR135W MSB3P48566 633 aaPredicted RBP7.39□□□□□ -1.23
CKS1YBR135W AFT1P22149 690 aa7.38□□□□□ -1.23
CKS1YBR135W SCD5P34758 872 aa7.38□□□□□ -1.23
CKS1YBR135W AIR1P40507 360 aaKnown RBP7.38□□□□□ -1.23
CKS1YBR135W RPB10P22139 70 aa7.37□□□□□ -1.23
CKS1YBR135W UGA3P26370 528 aa7.37□□□□□ -1.23
CKS1YBR135W YPL062WQ02781 134 aa7.37□□□□□ -1.23
CKS1YBR135W MRPL33P20084 86 aa7.36□□□□□ -1.23
CKS1YBR135W AAD14P42884 376 aa7.36□□□□□ -1.23
CKS1YBR135W NOP7P53261 605 aaKnown RBP7.36□□□□□ -1.23
CKS1YBR135W TRS120Q04183 1289 aa7.36□□□□□ -1.23
CKS1YBR135W ARG82P07250 355 aa7.35□□□□□ -1.23
CKS1YBR135W ATE1P16639 503 aa7.35□□□□□ -1.23
CKS1YBR135W KTR2P33550 425 aa7.35□□□□□ -1.23
CKS1YBR135W ASH1P34233 588 aa7.35□□□□□ -1.23
CKS1YBR135W PAM1P37304 830 aaKnown RBP7.35□□□□□ -1.23
CKS1YBR135W THI12P42883 340 aa7.35□□□□□ -1.23
CKS1YBR135W THI5P43534 340 aa7.35□□□□□ -1.23
CKS1YBR135W POL32P47110 350 aa7.35□□□□□ -1.23
CKS1YBR135W THI11P47183 340 aa7.35□□□□□ -1.23
CKS1YBR135W HST3P53687 447 aa7.35□□□□□ -1.23
CKS1YBR135W UTP4Q06679 776 aaKnown RBP7.35□□□□□ -1.23
CKS1YBR135W THI13Q07748 340 aa7.35□□□□□ -1.23
CKS1YBR135W MET4P32389 672 aa7.33□□□□□ -1.24
CKS1YBR135W SSN3P39073 555 aa7.33□□□□□ -1.24
CKS1YBR135W ALD2P47771 506 aa7.33□□□□□ -1.24
CKS1YBR135W UFD2P54860 961 aa7.33□□□□□ -1.24
CKS1YBR135W MSN5P52918 1224 aa7.32□□□□□ -1.24
CKS1YBR135W YNL165WP53891 406 aa7.32□□□□□ -1.24
CKS1YBR135W VMA3P25515 160 aa7.31□□□□□ -1.24
CKS1YBR135W ALA1P40825 983 aaKnown RBP7.31□□□□□ -1.24
CKS1YBR135W GPI13Q07830 1017 aa7.31□□□□□ -1.24
CKS1YBR135W MNL2Q12205 849 aa7.31□□□□□ -1.24
CKS1YBR135W Q0182Q9ZZW1 134 aa7.31□□□□□ -1.24
CKS1YBR135W JJJ2P46997 583 aa7.3□□□□□ -1.24
CKS1YBR135W PTK2P47116 818 aaKnown RBP7.3□□□□□ -1.24
CKS1YBR135W SUT1P53032 299 aaKnown RBP7.3□□□□□ -1.24
CKS1YBR135W MLF3P32047 452 aa7.29□□□□□ -1.24
CKS1YBR135W SHM1P37292 490 aaPredicted RBP7.29□□□□□ -1.24
CKS1YBR135W YJR107WP47145 328 aa7.28□□□□□ -1.24
CKS1YBR135W STB3Q12427 513 aa7.28□□□□□ -1.24
CKS1YBR135W RPS31P05759 152 aaKnown RBP7.27□□□□□ -1.25
CKS1YBR135W SMC1P32908 1225 aa7.27□□□□□ -1.25
CKS1YBR135W LDH1P38139 375 aa7.27□□□□□ -1.25
CKS1YBR135W HXT8P40886 569 aa7.27□□□□□ -1.25
CKS1YBR135W VTC4P47075 721 aa7.27□□□□□ -1.25
CKS1YBR135W YJR115WP47152 169 aa7.27□□□□□ -1.25
CKS1YBR135W PHO4P07270 312 aaKnown RBP7.26□□□□□ -1.25
CKS1YBR135W AHP1P38013 176 aaKnown RBP7.26□□□□□ -1.25
CKS1YBR135W MGE1P38523 228 aa7.26□□□□□ -1.25
CKS1YBR135W DYS1P38791 387 aa7.26□□□□□ -1.25
CKS1YBR135W QDR2P40474 542 aa7.26□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms