RNA–Protein interactions for RNA: YBR087W

RFC5, Transcript of Subunit of heteropentameric Replication factor C (RF-C), yeastyeast

Gene RFC5, Length 1,065 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFC5YBR087W DAL1P32375 460 aa6.13□□□□□ -1.43
RFC5YBR087W DLD3P39976 496 aaKnown RBP6.13□□□□□ -1.43
RFC5YBR087W RPP2BP02400 110 aaKnown RBP6.12□□□□□ -1.43
RFC5YBR087W UTP13Q05946 817 aaKnown RBP6.12□□□□□ -1.43
RFC5YBR087W ISR1Q06098 443 aaKnown RBP6.12□□□□□ -1.43
RFC5YBR087W TGL4P36165 910 aa6.11□□□□□ -1.43
RFC5YBR087W CUZ1P53899 274 aa6.11□□□□□ -1.43
RFC5YBR087W PUS1Q12211 544 aaKnown RBP6.11□□□□□ -1.43
RFC5YBR087W MDJ1P35191 511 aa6.09□□□□□ -1.43
RFC5YBR087W PHM7Q12252 991 aa6.09□□□□□ -1.43
RFC5YBR087W PUP1P25043 261 aa6.08□□□□□ -1.44
RFC5YBR087W HAL5P38970 855 aaKnown RBP6.08□□□□□ -1.44
RFC5YBR087W ECM23Q02710 187 aa6.08□□□□□ -1.44
RFC5YBR087W NOB1Q08444 459 aaKnown RBP6.08□□□□□ -1.44
RFC5YBR087W WTM2Q12206 467 aa6.08□□□□□ -1.44
RFC5YBR087W SSA1P10591 642 aaKnown RBP6.07□□□□□ -1.44
RFC5YBR087W SPT2P06843 333 aaPredicted RBP6.06□□□□□ -1.44
RFC5YBR087W GAL2P13181 574 aa6.06□□□□□ -1.44
RFC5YBR087W CEM1P39525 442 aa6.06□□□□□ -1.44
RFC5YBR087W UBP15P50101 1230 aa6.06□□□□□ -1.44
RFC5YBR087W MSN5P52918 1224 aa6.06□□□□□ -1.44
RFC5YBR087W NSG2P53898 299 aa6.06□□□□□ -1.44
RFC5YBR087W YML083CQ04526 418 aa6.06□□□□□ -1.44
RFC5YBR087W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
RFC5YBR087W UTR2P32623 467 aa6.05□□□□□ -1.44
RFC5YBR087W SSN3P39073 555 aa6.05□□□□□ -1.44
RFC5YBR087W LSB3P43603 459 aaKnown RBP6.05□□□□□ -1.44
RFC5YBR087W HDA3Q06623 655 aa6.05□□□□□ -1.44
RFC5YBR087W DAT1P13483 248 aaKnown RBP6.04□□□□□ -1.44
RFC5YBR087W PDI1P17967 522 aaKnown RBP6.04□□□□□ -1.44
RFC5YBR087W PHO87P25360 923 aa6.04□□□□□ -1.44
RFC5YBR087W SLA1P32790 1244 aa6.04□□□□□ -1.44
RFC5YBR087W AI1P03875 834 aa6.03□□□□□ -1.44
RFC5YBR087W UBX7P38349 436 aa6.03□□□□□ -1.44
RFC5YBR087W AIM9P40053 627 aaKnown RBP6.03□□□□□ -1.44
RFC5YBR087W YFL034WP43564 1073 aa6.03□□□□□ -1.44
RFC5YBR087W ACS2P52910 683 aaKnown RBP6.03□□□□□ -1.44
RFC5YBR087W RPL34AP87262 121 aaPredicted RBP6.03□□□□□ -1.44
RFC5YBR087W YMR265CQ03508 461 aaKnown RBP6.03□□□□□ -1.44
RFC5YBR087W TY1A-DR3Q12441 440 aa6.03□□□□□ -1.44
RFC5YBR087W TSC13Q99190 310 aa6.03□□□□□ -1.44
RFC5YBR087W HAP4P14064 554 aa6.02□□□□□ -1.45
RFC5YBR087W DIT1P21623 536 aa6.02□□□□□ -1.45
RFC5YBR087W GEF1P37020 779 aa6.02□□□□□ -1.45
RFC5YBR087W YFL066CP43538 392 aa6.02□□□□□ -1.45
RFC5YBR087W THI72Q08579 599 aa6.02□□□□□ -1.45
RFC5YBR087W TBS1P38114 1094 aa6.01□□□□□ -1.45
RFC5YBR087W UTP7P40055 554 aaKnown RBP6.01□□□□□ -1.45
RFC5YBR087W SYT1Q06836 1226 aa6.01□□□□□ -1.45
RFC5YBR087W AHP1P38013 176 aaKnown RBP6□□□□□ -1.45
RFC5YBR087W NTH2P35172 780 aa5.99□□□□□ -1.45
RFC5YBR087W KRE33P53914 1056 aaKnown RBP5.99□□□□□ -1.45
RFC5YBR087W GAS4Q08271 471 aa5.99□□□□□ -1.45
RFC5YBR087W SLX8P40072 274 aa5.98□□□□□ -1.45
RFC5YBR087W ROM1P53046 1155 aa5.98□□□□□ -1.45
RFC5YBR087W ADE12P80210 433 aaKnown RBP5.98□□□□□ -1.45
RFC5YBR087W YDR461C-AQ2V2P7 80 aa5.98□□□□□ -1.45
RFC5YBR087W SWI5P08153 709 aa5.97□□□□□ -1.45
RFC5YBR087W RPS6AP0CX37 236 aaKnown RBP5.97□□□□□ -1.45
RFC5YBR087W RPS6BP0CX38 236 aaPredicted RBP5.97□□□□□ -1.45
RFC5YBR087W SUM1P46676 1062 aa5.97□□□□□ -1.45
RFC5YBR087W ALA1P40825 983 aaKnown RBP5.96□□□□□ -1.46
RFC5YBR087W CYT1P07143 309 aa5.95□□□□□ -1.46
RFC5YBR087W VAN1P23642 535 aa5.95□□□□□ -1.46
RFC5YBR087W JJJ2P46997 583 aa5.95□□□□□ -1.46
RFC5YBR087W SBE2P42223 864 aaKnown RBP5.94□□□□□ -1.46
RFC5YBR087W CCT8P47079 568 aaKnown RBP5.94□□□□□ -1.46
RFC5YBR087W PUF6Q04373 656 aaKnown RBP5.94□□□□□ -1.46
RFC5YBR087W YPR053CQ6Q5F3 151 aa5.94□□□□□ -1.46
RFC5YBR087W IRE1P32361 1115 aa5.93□□□□□ -1.46
RFC5YBR087W SHM1P37292 490 aaPredicted RBP5.93□□□□□ -1.46
RFC5YBR087W CDC3P32457 520 aaKnown RBP5.92□□□□□ -1.46
RFC5YBR087W TRS33Q99394 268 aa5.92□□□□□ -1.46
RFC5YBR087W UBP1P25037 809 aa5.91□□□□□ -1.46
RFC5YBR087W TDA6Q06466 467 aa5.91□□□□□ -1.46
RFC5YBR087W PUN1Q06991 263 aa5.91□□□□□ -1.46
RFC5YBR087W CWH41P53008 833 aa5.9□□□□□ -1.46
RFC5YBR087W CWC15Q03772 175 aaKnown RBP5.9□□□□□ -1.46
RFC5YBR087W FPS1P23900 669 aa5.89□□□□□ -1.47
RFC5YBR087W PSH1Q12161 406 aa5.89□□□□□ -1.47
RFC5YBR087W GPM1P00950 247 aaKnown RBP5.88□□□□□ -1.47
RFC5YBR087W SRS2P12954 1174 aa5.88□□□□□ -1.47
RFC5YBR087W PDC6P26263 563 aaKnown RBP5.88□□□□□ -1.47
RFC5YBR087W NGR1P32831 672 aaKnown RBP5.88□□□□□ -1.47
RFC5YBR087W TPS3P38426 1054 aaKnown RBP5.88□□□□□ -1.47
RFC5YBR087W MRPL16P38064 232 aa5.87□□□□□ -1.47
RFC5YBR087W SKN7P38889 622 aa5.87□□□□□ -1.47
RFC5YBR087W ALD4P46367 519 aaKnown RBP5.87□□□□□ -1.47
RFC5YBR087W YNR014WP53719 212 aa5.87□□□□□ -1.47
RFC5YBR087W YMR187CQ03236 431 aa5.87□□□□□ -1.47
RFC5YBR087W PNP1Q05788 311 aa5.87□□□□□ -1.47
RFC5YBR087W YPQ2Q06328 317 aa5.87□□□□□ -1.47
RFC5YBR087W MCM1P11746 286 aa5.86□□□□□ -1.47
RFC5YBR087W SUV3P32580 737 aa5.86□□□□□ -1.47
RFC5YBR087W STB3Q12427 513 aa5.86□□□□□ -1.47
RFC5YBR087W RPS31P05759 152 aaKnown RBP5.85□□□□□ -1.47
RFC5YBR087W KAR5Q04746 504 aa5.85□□□□□ -1.47
RFC5YBR087W HAT1Q12341 374 aa5.85□□□□□ -1.47
RFC5YBR087W MCX1P38323 520 aaPredicted RBP5.84□□□□□ -1.47
RFC5YBR087W FOX2Q02207 900 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms