RNA–Protein interactions for RNA: YBR061C

TRM7, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM7, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM7YBR061C ATG3P40344 310 aa4.03□□□□□ -1.76
TRM7YBR061C KTR7P40504 517 aa4.03□□□□□ -1.76
TRM7YBR061C RDS2P19541 446 aaKnown RBP4.02□□□□□ -1.77
TRM7YBR061C SSA4P22202 642 aaKnown RBP4.02□□□□□ -1.77
TRM7YBR061C SOH1P38633 127 aa4.02□□□□□ -1.77
TRM7YBR061C DAL1P32375 460 aa4.01□□□□□ -1.77
TRM7YBR061C SIS2P36024 562 aa4.01□□□□□ -1.77
TRM7YBR061C SBE2P42223 864 aaKnown RBP4.01□□□□□ -1.77
TRM7YBR061C ATG20Q07528 640 aa4.01□□□□□ -1.77
TRM7YBR061C FBP26P32604 452 aa4□□□□□ -1.77
TRM7YBR061C PEP12P32854 288 aa4□□□□□ -1.77
TRM7YBR061C APL6P46682 809 aa4□□□□□ -1.77
TRM7YBR061C ISR1Q06098 443 aaKnown RBP4□□□□□ -1.77
TRM7YBR061C SYT1Q06836 1226 aa4□□□□□ -1.77
TRM7YBR061C YPR053CQ6Q5F3 151 aa4□□□□□ -1.77
TRM7YBR061C TGL4P36165 910 aa3.99□□□□□ -1.77
TRM7YBR061C UTP13Q05946 817 aaKnown RBP3.99□□□□□ -1.77
TRM7YBR061C TDA6Q06466 467 aa3.99□□□□□ -1.77
TRM7YBR061C SUB2Q07478 446 aaKnown RBP3.99□□□□□ -1.77
TRM7YBR061C BDS1Q08347 646 aa3.99□□□□□ -1.77
TRM7YBR061C YCK2P23292 546 aaKnown RBP3.98□□□□□ -1.77
TRM7YBR061C HAL5P38970 855 aaKnown RBP3.98□□□□□ -1.77
TRM7YBR061C CEM1P39525 442 aa3.98□□□□□ -1.77
TRM7YBR061C SLA1P32790 1244 aa3.97□□□□□ -1.77
TRM7YBR061C ECM23Q02710 187 aa3.97□□□□□ -1.77
TRM7YBR061C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
TRM7YBR061C SSA1P10591 642 aaKnown RBP3.96□□□□□ -1.78
TRM7YBR061C PUP1P25043 261 aa3.96□□□□□ -1.78
TRM7YBR061C UTR2P32623 467 aa3.96□□□□□ -1.78
TRM7YBR061C ISU1Q03020 165 aa3.96□□□□□ -1.78
TRM7YBR061C YML083CQ04526 418 aa3.96□□□□□ -1.78
TRM7YBR061C HDA3Q06623 655 aa3.96□□□□□ -1.78
TRM7YBR061C NOB1Q08444 459 aaKnown RBP3.96□□□□□ -1.78
TRM7YBR061C TY1A-DR3Q12441 440 aa3.96□□□□□ -1.78
TRM7YBR061C GAL2P13181 574 aa3.95□□□□□ -1.78
TRM7YBR061C DAT1P13483 248 aaKnown RBP3.95□□□□□ -1.78
TRM7YBR061C PDI1P17967 522 aaKnown RBP3.95□□□□□ -1.78
TRM7YBR061C DIT1P21623 536 aa3.95□□□□□ -1.78
TRM7YBR061C ADE12P80210 433 aaKnown RBP3.95□□□□□ -1.78
TRM7YBR061C YMR187CQ03236 431 aa3.95□□□□□ -1.78
TRM7YBR061C RPP2BP02400 110 aaKnown RBP3.94□□□□□ -1.78
TRM7YBR061C PHO87P25360 923 aa3.94□□□□□ -1.78
TRM7YBR061C TBS1P38114 1094 aa3.94□□□□□ -1.78
TRM7YBR061C MCX1P38323 520 aaPredicted RBP3.94□□□□□ -1.78
TRM7YBR061C UBX7P38349 436 aa3.94□□□□□ -1.78
TRM7YBR061C AIM9P40053 627 aaKnown RBP3.94□□□□□ -1.78
TRM7YBR061C YFL034WP43564 1073 aa3.94□□□□□ -1.78
TRM7YBR061C ACS2P52910 683 aaKnown RBP3.94□□□□□ -1.78
TRM7YBR061C YDR461C-AQ2V2P7 80 aa3.94□□□□□ -1.78
TRM7YBR061C SBP1P10080 294 aaKnown RBP3.93□□□□□ -1.78
TRM7YBR061C HAP4P14064 554 aa3.93□□□□□ -1.78
TRM7YBR061C GEF1P37020 779 aa3.93□□□□□ -1.78
TRM7YBR061C SSN3P39073 555 aa3.93□□□□□ -1.78
TRM7YBR061C TSC13Q99190 310 aa3.93□□□□□ -1.78
TRM7YBR061C SPT2P06843 333 aaPredicted RBP3.92□□□□□ -1.78
TRM7YBR061C NTH2P35172 780 aa3.92□□□□□ -1.78
TRM7YBR061C DLD3P39976 496 aaKnown RBP3.92□□□□□ -1.78
TRM7YBR061C UBP15P50101 1230 aa3.92□□□□□ -1.78
TRM7YBR061C RPL34AP87262 121 aaPredicted RBP3.92□□□□□ -1.78
TRM7YBR061C YMR265CQ03508 461 aaKnown RBP3.92□□□□□ -1.78
TRM7YBR061C WTM2Q12206 467 aa3.92□□□□□ -1.78
TRM7YBR061C RPS6AP0CX37 236 aaKnown RBP3.91□□□□□ -1.78
TRM7YBR061C RPS6BP0CX38 236 aaPredicted RBP3.91□□□□□ -1.78
TRM7YBR061C AMN1P38285 549 aaPredicted RBP3.91□□□□□ -1.78
TRM7YBR061C SLN1P39928 1220 aaPredicted RBP3.91□□□□□ -1.78
TRM7YBR061C SLX8P40072 274 aa3.91□□□□□ -1.78
TRM7YBR061C KRE33P53914 1056 aaKnown RBP3.91□□□□□ -1.78
TRM7YBR061C GAS4Q08271 471 aa3.91□□□□□ -1.78
TRM7YBR061C YDR215CQ12240 137 aa3.91□□□□□ -1.78
TRM7YBR061C SWI5P08153 709 aa3.9□□□□□ -1.79
TRM7YBR061C UTP7P40055 554 aaKnown RBP3.9□□□□□ -1.79
TRM7YBR061C ROM1P53046 1155 aa3.9□□□□□ -1.79
TRM7YBR061C GPM1P00950 247 aaKnown RBP3.89□□□□□ -1.79
TRM7YBR061C MSN5P52918 1224 aa3.89□□□□□ -1.79
TRM7YBR061C CYT1P07143 309 aa3.88□□□□□ -1.79
TRM7YBR061C VAN1P23642 535 aa3.88□□□□□ -1.79
TRM7YBR061C YML020WQ03722 664 aa3.88□□□□□ -1.79
TRM7YBR061C SUM1P46676 1062 aa3.87□□□□□ -1.79
TRM7YBR061C NOP8Q08287 484 aaPredicted RBP3.87□□□□□ -1.79
TRM7YBR061C MCA1Q08601 432 aa3.87□□□□□ -1.79
TRM7YBR061C TRS33Q99394 268 aa3.87□□□□□ -1.79
TRM7YBR061C ALA1P40825 983 aaKnown RBP3.86□□□□□ -1.79
TRM7YBR061C PUF6Q04373 656 aaKnown RBP3.86□□□□□ -1.79
TRM7YBR061C PUN1Q06991 263 aa3.86□□□□□ -1.79
TRM7YBR061C UBP1P25037 809 aa3.85□□□□□ -1.79
TRM7YBR061C CDC3P32457 520 aaKnown RBP3.85□□□□□ -1.79
TRM7YBR061C LSB6P42951 607 aa3.85□□□□□ -1.79
TRM7YBR061C CWH41P53008 833 aa3.85□□□□□ -1.79
TRM7YBR061C TPS3P38426 1054 aaKnown RBP3.84□□□□□ -1.79
TRM7YBR061C YNR014WP53719 212 aa3.84□□□□□ -1.79
TRM7YBR061C YPQ2Q06328 317 aa3.84□□□□□ -1.79
TRM7YBR061C SRS2P12954 1174 aa3.83□□□□□ -1.8
TRM7YBR061C NGR1P32831 672 aaKnown RBP3.83□□□□□ -1.8
TRM7YBR061C SLD2P34252 453 aa3.83□□□□□ -1.8
TRM7YBR061C SHM1P37292 490 aaPredicted RBP3.83□□□□□ -1.8
TRM7YBR061C AHP1P38013 176 aaKnown RBP3.83□□□□□ -1.8
TRM7YBR061C BOI2P39969 1040 aa3.83□□□□□ -1.8
TRM7YBR061C ALD4P46367 519 aaKnown RBP3.83□□□□□ -1.8
TRM7YBR061C CWC15Q03772 175 aaKnown RBP3.83□□□□□ -1.8
TRM7YBR061C PNP1Q05788 311 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms