RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SLC26A8Q96RN1 970 aa25.23■■□□□ 1.63
CACNA1A-259ENST00000638114 HDGFP51858 240 aaKnown RBP25.22■■□□□ 1.63
CACNA1A-259ENST00000638114 TRIM52Q96A61 297 aa25.22■■□□□ 1.63
CACNA1A-259ENST00000638114 TOM1O60784 492 aa25.21■■□□□ 1.63
CACNA1A-259ENST00000638114 SENP3Q9H4L4 574 aaPredicted RBP25.21■■□□□ 1.63
CACNA1A-259ENST00000638114 SCAF1Q9H7N4 1312 aaKnown RBP25.2■■□□□ 1.62
CACNA1A-259ENST00000638114 PLEKHG1Q9ULL1 1385 aa25.18■■□□□ 1.62
CACNA1A-259ENST00000638114 PIP4K2BP78356 416 aa25.18■■□□□ 1.62
CACNA1A-259ENST00000638114 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.18■■□□□ 1.62
CACNA1A-259ENST00000638114 NUTM2DQ5VT03 806 aaPredicted RBP25.15■■□□□ 1.62
CACNA1A-259ENST00000638114 KCNA6P17658 529 aa25.14■■□□□ 1.62
CACNA1A-259ENST00000638114 TRPM2O94759 1503 aa25.13■■□□□ 1.61
CACNA1A-259ENST00000638114 SLC4A1APQ9BWU0 796 aaKnown RBP25.12■■□□□ 1.61
CACNA1A-259ENST00000638114 CLTCL1P53675 1640 aa25.12■■□□□ 1.61
CACNA1A-259ENST00000638114 XIRP1Q702N8 1843 aaKnown RBP25.11■■□□□ 1.61
CACNA1A-259ENST00000638114 ALKQ9UM73 1620 aa25.11■■□□□ 1.61
CACNA1A-259ENST00000638114 NWD1Q149M9 1564 aa25.1■■□□□ 1.61
CACNA1A-259ENST00000638114 ZNF326Q5BKZ1 582 aaKnown RBP25.09■■□□□ 1.61
CACNA1A-259ENST00000638114 TMEM94Q12767 1356 aa25.07■■□□□ 1.6
CACNA1A-259ENST00000638114 PROSER2Q86WR7 435 aaPredicted RBP25.07■■□□□ 1.6
CACNA1A-259ENST00000638114 NKTRP30414 1462 aaKnown RBP25.07■■□□□ 1.6
CACNA1A-259ENST00000638114 TBX22Q9Y458 520 aa25.06■■□□□ 1.6
CACNA1A-259ENST00000638114 KIF1BO60333 1816 aa25.05■■□□□ 1.6
CACNA1A-259ENST00000638114 ADAMTS13Q76LX8 1427 aa25.05■■□□□ 1.6
CACNA1A-259ENST00000638114 DIP2AQ14689 1571 aa25.05■■□□□ 1.6
CACNA1A-259ENST00000638114 CHD2O14647 1828 aaKnown RBP25.05■■□□□ 1.6
CACNA1A-259ENST00000638114 HSPA1LP34931 641 aa25.04■■□□□ 1.6
CACNA1A-259ENST00000638114 RBM33Q96EV2 1170 aaKnown RBP25.03■■□□□ 1.6
CACNA1A-259ENST00000638114 FOXD1Q16676 465 aa25■■□□□ 1.59
CACNA1A-259ENST00000638114 NEXMIFQ5QGS0 1516 aa24.99■■□□□ 1.59
CACNA1A-259ENST00000638114 SETD5Q9C0A6 1442 aa24.98■■□□□ 1.59
CACNA1A-259ENST00000638114 DISP3Q9P2K9 1392 aa24.98■■□□□ 1.59
CACNA1A-259ENST00000638114 SETBP1Q9Y6X0 1596 aa24.97■■□□□ 1.59
CACNA1A-259ENST00000638114 PIK3R4Q99570 1358 aa24.97■■□□□ 1.59
CACNA1A-259ENST00000638114 NRXN3Q9Y4C0 1643 aa24.97■■□□□ 1.59
CACNA1A-259ENST00000638114 MPHOSPH9Q99550 1183 aa24.96■■□□□ 1.59
CACNA1A-259ENST00000638114 MSH6P52701 1360 aa24.94■■□□□ 1.58
CACNA1A-259ENST00000638114 ACIN1Q9UKV3 1341 aaKnown RBP24.92■■□□□ 1.58
CACNA1A-259ENST00000638114 AMOTL2Q9Y2J4 779 aa24.91■■□□□ 1.58
CACNA1A-259ENST00000638114 CCDC144AA2RUR9 1427 aa24.91■■□□□ 1.58
CACNA1A-259ENST00000638114 PTPRUQ92729 1446 aa24.91■■□□□ 1.58
CACNA1A-259ENST00000638114 C14orf37Q86TY3 774 aa24.9■■□□□ 1.58
CACNA1A-259ENST00000638114 RAB3GAP2Q9H2M9 1393 aa24.9■■□□□ 1.58
CACNA1A-259ENST00000638114 RPGRIP1LQ68CZ1 1315 aa24.87■■□□□ 1.57
CACNA1A-259ENST00000638114 NCOA3Q9Y6Q9 1424 aa24.87■■□□□ 1.57
CACNA1A-259ENST00000638114 VGFO15240 615 aaPredicted RBP24.87■■□□□ 1.57
CACNA1A-259ENST00000638114 METP08581 1390 aa24.87■■□□□ 1.57
CACNA1A-259ENST00000638114 FAM135BQ49AJ0 1406 aa24.86■■□□□ 1.57
CACNA1A-259ENST00000638114 XRN1Q8IZH2 1706 aaKnown RBP24.86■■□□□ 1.57
CACNA1A-259ENST00000638114 PPLO60437 1756 aa24.85■■□□□ 1.57
CACNA1A-259ENST00000638114 ROBO1Q9Y6N7 1651 aa24.85■■□□□ 1.57
CACNA1A-259ENST00000638114 SLAIN2Q9P270 581 aa24.82■■□□□ 1.56
CACNA1A-259ENST00000638114 RGL3Q3MIN7 710 aa24.81■■□□□ 1.56
CACNA1A-259ENST00000638114 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.81■■□□□ 1.56
CACNA1A-259ENST00000638114 MED1Q15648 1581 aaPredicted RBP24.8■■□□□ 1.56
CACNA1A-259ENST00000638114 C19orf44Q9H6X5 657 aa24.8■■□□□ 1.56
CACNA1A-259ENST00000638114 SPATA31E1Q6ZUB1 1445 aa24.79■■□□□ 1.56
CACNA1A-259ENST00000638114 SETD1AO15047 1707 aaKnown RBP24.78■■□□□ 1.56
CACNA1A-259ENST00000638114 ATF3P18847 181 aa24.78■■□□□ 1.56
CACNA1A-259ENST00000638114 CADPS2Q86UW7 1296 aa24.77■■□□□ 1.56
CACNA1A-259ENST00000638114 ILDR2Q71H61 639 aa24.74■■□□□ 1.55
CACNA1A-259ENST00000638114 ANKRD30BQ9BXX2 1392 aa24.74■■□□□ 1.55
CACNA1A-259ENST00000638114 IFT172Q9UG01 1749 aa24.74■■□□□ 1.55
CACNA1A-259ENST00000638114 ADGRF5Q8IZF2 1346 aa24.73■■□□□ 1.55
CACNA1A-259ENST00000638114 DCCP43146 1447 aa24.72■■□□□ 1.55
CACNA1A-259ENST00000638114 PHLPP1O60346 1717 aa24.7■■□□□ 1.54
CACNA1A-259ENST00000638114 PTCH1Q13635 1447 aa24.69■■□□□ 1.54
CACNA1A-259ENST00000638114 ADGRL3Q9HAR2 1447 aa24.69■■□□□ 1.54
CACNA1A-259ENST00000638114 HRCP23327 699 aa24.69■■□□□ 1.54
CACNA1A-259ENST00000638114 NALCNQ8IZF0 1738 aa24.68■■□□□ 1.54
CACNA1A-259ENST00000638114 ROBO2Q9HCK4 1378 aa24.67■■□□□ 1.54
CACNA1A-259ENST00000638114 PHF23Q9BUL5 403 aaPredicted RBP24.66■■□□□ 1.54
CACNA1A-259ENST00000638114 PRAG1Q86YV5 1406 aa24.65■■□□□ 1.54
CACNA1A-259ENST00000638114 PIK3C2GO75747 1445 aa24.64■■□□□ 1.54
CACNA1A-259ENST00000638114 MST1RQ04912 1400 aa24.63■■□□□ 1.53
CACNA1A-259ENST00000638114 COL16A1Q07092 1604 aaPredicted RBP24.62■■□□□ 1.53
CACNA1A-259ENST00000638114 BRINP3Q76B58 766 aa24.62■■□□□ 1.53
CACNA1A-259ENST00000638114 AHDC1Q5TGY3 1603 aaPredicted RBP24.61■■□□□ 1.53
CACNA1A-259ENST00000638114 STK26Q9P289 416 aa24.6■■□□□ 1.53
CACNA1A-259ENST00000638114 ASXL1Q8IXJ9 1541 aa24.6■■□□□ 1.53
CACNA1A-259ENST00000638114 MYOM2P54296 1465 aa24.59■■□□□ 1.53
CACNA1A-259ENST00000638114 JCADQ9P266 1359 aa24.58■■□□□ 1.53
CACNA1A-259ENST00000638114 TMEM132EQ6IEE7 984 aa24.58■■□□□ 1.53
CACNA1A-259ENST00000638114 LRPPRCP42704 1394 aaKnown RBP24.57■■□□□ 1.52
CACNA1A-259ENST00000638114 NRXN1Q9ULB1 1477 aa24.57■■□□□ 1.52
CACNA1A-259ENST00000638114 LAMC1P11047 1609 aa24.54■■□□□ 1.52
CACNA1A-259ENST00000638114 TECPR2O15040 1411 aa24.54■■□□□ 1.52
CACNA1A-259ENST00000638114 KNDC1Q76NI1 1749 aa24.54■■□□□ 1.52
CACNA1A-259ENST00000638114 ABCC11Q96J66 1382 aa24.54■■□□□ 1.52
CACNA1A-259ENST00000638114 C1orf167Q5SNV9 1468 aa24.53■■□□□ 1.52
CACNA1A-259ENST00000638114 C14orf93Q9H972 538 aaKnown RBP24.53■■□□□ 1.52
CACNA1A-259ENST00000638114 YTHDC2Q9H6S0 1430 aaKnown RBP24.52■■□□□ 1.52
CACNA1A-259ENST00000638114 CFAP70Q5T0N1 1121 aa24.52■■□□□ 1.52
CACNA1A-259ENST00000638114 NHSL1Q5SYE7 1610 aa24.51■■□□□ 1.51
CACNA1A-259ENST00000638114 SOCS7O14512 581 aa24.51■■□□□ 1.51
CACNA1A-259ENST00000638114 WAPLQ7Z5K2 1190 aa24.51■■□□□ 1.51
CACNA1A-259ENST00000638114 CDC42BPGQ6DT37 1551 aa24.5■■□□□ 1.51
CACNA1A-259ENST00000638114 KDM2AQ9Y2K7 1162 aa24.49■■□□□ 1.51
CACNA1A-259ENST00000638114 SHPRHQ149N8 1683 aa24.48■■□□□ 1.51
CACNA1A-259ENST00000638114 DHX57Q6P158 1386 aaKnown RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms