RNA–Protein interactions for RNA: ENST00000635989.1

CLN5-207, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 604 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-207ENST00000635989 LRRC7Q96NW7 1537 aa28.97■■■□□ 2.23
CLN5-207ENST00000635989 PLEKHG1Q9ULL1 1385 aa28.97■■■□□ 2.23
CLN5-207ENST00000635989 UBAP1LF5GYI3 381 aa28.96■■■□□ 2.23
CLN5-207ENST00000635989 BCANQ96GW7 911 aa28.95■■■□□ 2.22
CLN5-207ENST00000635989 KIF1BO60333 1816 aa28.94■■■□□ 2.22
CLN5-207ENST00000635989 NWD1Q149M9 1564 aa28.94■■■□□ 2.22
CLN5-207ENST00000635989 HDGFP51858 240 aaKnown RBP28.93■■■□□ 2.22
CLN5-207ENST00000635989 SLC4A1APQ9BWU0 796 aaKnown RBP28.93■■■□□ 2.22
CLN5-207ENST00000635989 DIP2AQ14689 1571 aa28.92■■■□□ 2.22
CLN5-207ENST00000635989 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.91■■■□□ 2.22
CLN5-207ENST00000635989 SLC26A8Q96RN1 970 aa28.91■■■□□ 2.22
CLN5-207ENST00000635989 SENP3Q9H4L4 574 aaPredicted RBP28.91■■■□□ 2.22
CLN5-207ENST00000635989 SETD5Q9C0A6 1442 aa28.88■■■□□ 2.21
CLN5-207ENST00000635989 NKTRP30414 1462 aaKnown RBP28.88■■■□□ 2.21
CLN5-207ENST00000635989 XIRP1Q702N8 1843 aaKnown RBP28.87■■■□□ 2.21
CLN5-207ENST00000635989 NUTM2DQ5VT03 806 aaPredicted RBP28.86■■■□□ 2.21
CLN5-207ENST00000635989 NEXMIFQ5QGS0 1516 aa28.84■■■□□ 2.21
CLN5-207ENST00000635989 ZNF326Q5BKZ1 582 aaKnown RBP28.84■■■□□ 2.21
CLN5-207ENST00000635989 SCAF1Q9H7N4 1312 aaKnown RBP28.83■■■□□ 2.21
CLN5-207ENST00000635989 ALKQ9UM73 1620 aa28.83■■■□□ 2.21
CLN5-207ENST00000635989 CHD2O14647 1828 aaKnown RBP28.82■■■□□ 2.2
CLN5-207ENST00000635989 NRXN3Q9Y4C0 1643 aa28.81■■■□□ 2.2
CLN5-207ENST00000635989 SETBP1Q9Y6X0 1596 aa28.81■■■□□ 2.2
CLN5-207ENST00000635989 ADAMTS13Q76LX8 1427 aa28.81■■■□□ 2.2
CLN5-207ENST00000635989 TOM1O60784 492 aa28.81■■■□□ 2.2
CLN5-207ENST00000635989 KCNA6P17658 529 aa28.8■■■□□ 2.2
CLN5-207ENST00000635989 RAB3GAP2Q9H2M9 1393 aa28.79■■■□□ 2.2
CLN5-207ENST00000635989 ACIN1Q9UKV3 1341 aaKnown RBP28.77■■■□□ 2.2
CLN5-207ENST00000635989 PIP4K2BP78356 416 aa28.77■■■□□ 2.2
CLN5-207ENST00000635989 FOXD1Q16676 465 aa28.77■■■□□ 2.2
CLN5-207ENST00000635989 TMEM94Q12767 1356 aa28.76■■■□□ 2.2
CLN5-207ENST00000635989 CCDC144AA2RUR9 1427 aa28.76■■■□□ 2.19
CLN5-207ENST00000635989 MPHOSPH9Q99550 1183 aa28.75■■■□□ 2.19
CLN5-207ENST00000635989 PPLO60437 1756 aa28.73■■■□□ 2.19
CLN5-207ENST00000635989 TBX22Q9Y458 520 aa28.73■■■□□ 2.19
CLN5-207ENST00000635989 PROSER2Q86WR7 435 aaPredicted RBP28.71■■■□□ 2.19
CLN5-207ENST00000635989 PIK3R4Q99570 1358 aa28.71■■■□□ 2.19
CLN5-207ENST00000635989 XRN1Q8IZH2 1706 aaKnown RBP28.69■■■□□ 2.18
CLN5-207ENST00000635989 RBM33Q96EV2 1170 aaKnown RBP28.66■■■□□ 2.18
CLN5-207ENST00000635989 IFT172Q9UG01 1749 aa28.65■■■□□ 2.18
CLN5-207ENST00000635989 MSH6P52701 1360 aa28.64■■■□□ 2.18
CLN5-207ENST00000635989 SETD1AO15047 1707 aaKnown RBP28.63■■■□□ 2.17
CLN5-207ENST00000635989 PTPRUQ92729 1446 aa28.63■■■□□ 2.17
CLN5-207ENST00000635989 RPGRIP1LQ68CZ1 1315 aa28.62■■■□□ 2.17
CLN5-207ENST00000635989 SPATA31E1Q6ZUB1 1445 aa28.61■■■□□ 2.17
CLN5-207ENST00000635989 HSPA1LP34931 641 aa28.6■■■□□ 2.17
CLN5-207ENST00000635989 VGFO15240 615 aaPredicted RBP28.58■■■□□ 2.17
CLN5-207ENST00000635989 METP08581 1390 aa28.58■■■□□ 2.17
CLN5-207ENST00000635989 ROBO1Q9Y6N7 1651 aa28.58■■■□□ 2.16
CLN5-207ENST00000635989 C14orf37Q86TY3 774 aa28.56■■■□□ 2.16
CLN5-207ENST00000635989 AMOTL2Q9Y2J4 779 aa28.56■■■□□ 2.16
CLN5-207ENST00000635989 NCOA3Q9Y6Q9 1424 aa28.56■■■□□ 2.16
CLN5-207ENST00000635989 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.55■■■□□ 2.16
CLN5-207ENST00000635989 RGL3Q3MIN7 710 aa28.52■■■□□ 2.16
CLN5-207ENST00000635989 ANKRD30BQ9BXX2 1392 aa28.51■■■□□ 2.16
CLN5-207ENST00000635989 FAM135BQ49AJ0 1406 aa28.49■■■□□ 2.15
CLN5-207ENST00000635989 NALCNQ8IZF0 1738 aa28.49■■■□□ 2.15
CLN5-207ENST00000635989 DISP3Q9P2K9 1392 aa28.48■■■□□ 2.15
CLN5-207ENST00000635989 PTCH1Q13635 1447 aa28.47■■■□□ 2.15
CLN5-207ENST00000635989 HRCP23327 699 aa28.47■■■□□ 2.15
CLN5-207ENST00000635989 MED1Q15648 1581 aaPredicted RBP28.45■■■□□ 2.15
CLN5-207ENST00000635989 ADGRF5Q8IZF2 1346 aa28.44■■■□□ 2.14
CLN5-207ENST00000635989 DCCP43146 1447 aa28.44■■■□□ 2.14
CLN5-207ENST00000635989 MYOM2P54296 1465 aa28.44■■■□□ 2.14
CLN5-207ENST00000635989 PIK3C2GO75747 1445 aa28.43■■■□□ 2.14
CLN5-207ENST00000635989 LAMC1P11047 1609 aa28.43■■■□□ 2.14
CLN5-207ENST00000635989 PRAG1Q86YV5 1406 aa28.43■■■□□ 2.14
CLN5-207ENST00000635989 ADGRL3Q9HAR2 1447 aa28.43■■■□□ 2.14
CLN5-207ENST00000635989 ATF3P18847 181 aa28.41■■■□□ 2.14
CLN5-207ENST00000635989 CADPS2Q86UW7 1296 aa28.41■■■□□ 2.14
CLN5-207ENST00000635989 C19orf44Q9H6X5 657 aa28.41■■■□□ 2.14
CLN5-207ENST00000635989 PHLPP1O60346 1717 aa28.4■■■□□ 2.14
CLN5-207ENST00000635989 ASXL1Q8IXJ9 1541 aa28.4■■■□□ 2.14
CLN5-207ENST00000635989 SLAIN2Q9P270 581 aa28.4■■■□□ 2.14
CLN5-207ENST00000635989 KNDC1Q76NI1 1749 aa28.39■■■□□ 2.14
CLN5-207ENST00000635989 NRXN1Q9ULB1 1477 aa28.37■■■□□ 2.13
CLN5-207ENST00000635989 ROBO2Q9HCK4 1378 aa28.37■■■□□ 2.13
CLN5-207ENST00000635989 MST1RQ04912 1400 aa28.32■■■□□ 2.12
CLN5-207ENST00000635989 COL16A1Q07092 1604 aaPredicted RBP28.32■■■□□ 2.12
CLN5-207ENST00000635989 AHDC1Q5TGY3 1603 aaPredicted RBP28.32■■■□□ 2.12
CLN5-207ENST00000635989 TECPR2O15040 1411 aa28.3■■■□□ 2.12
CLN5-207ENST00000635989 LRPPRCP42704 1394 aaKnown RBP28.29■■■□□ 2.12
CLN5-207ENST00000635989 CDC42BPGQ6DT37 1551 aa28.27■■■□□ 2.12
CLN5-207ENST00000635989 YTHDC2Q9H6S0 1430 aaKnown RBP28.26■■■□□ 2.11
CLN5-207ENST00000635989 STK26Q9P289 416 aa28.25■■■□□ 2.11
CLN5-207ENST00000635989 NHSL1Q5SYE7 1610 aa28.25■■■□□ 2.11
CLN5-207ENST00000635989 TMEM132EQ6IEE7 984 aa28.23■■■□□ 2.11
CLN5-207ENST00000635989 BRINP3Q76B58 766 aa28.21■■■□□ 2.11
CLN5-207ENST00000635989 ABCC11Q96J66 1382 aa28.21■■■□□ 2.11
CLN5-207ENST00000635989 C14orf93Q9H972 538 aaKnown RBP28.2■■■□□ 2.1
CLN5-207ENST00000635989 CFAP70Q5T0N1 1121 aa28.19■■■□□ 2.1
CLN5-207ENST00000635989 C1orf167Q5SNV9 1468 aa28.19■■■□□ 2.1
CLN5-207ENST00000635989 DCAF11Q8TEB1 546 aa28.18■■■□□ 2.1
CLN5-207ENST00000635989 PHF23Q9BUL5 403 aaPredicted RBP28.18■■■□□ 2.1
CLN5-207ENST00000635989 JCADQ9P266 1359 aa28.18■■■□□ 2.1
CLN5-207ENST00000635989 ADGRB1O14514 1584 aa28.18■■■□□ 2.1
CLN5-207ENST00000635989 SHPRHQ149N8 1683 aa28.17■■■□□ 2.1
CLN5-207ENST00000635989 DHX57Q6P158 1386 aaKnown RBP28.17■■■□□ 2.1
CLN5-207ENST00000635989 KDM2AQ9Y2K7 1162 aa28.17■■■□□ 2.1
CLN5-207ENST00000635989 PLEKHH1Q9ULM0 1364 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms