RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 SPHKAPQ2M3C7 1700 aa15.48■□□□□ 0.07
PCDHGC3-207ENST00000622656 SLC26A8Q96RN1 970 aa15.48■□□□□ 0.07
PCDHGC3-207ENST00000622656 PIP4K2BP78356 416 aa15.47■□□□□ 0.07
PCDHGC3-207ENST00000622656 RIMS2Q9UQ26 1411 aa15.46■□□□□ 0.07
PCDHGC3-207ENST00000622656 CHGAP10645 457 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-207ENST00000622656 NUTM2DQ5VT03 806 aaPredicted RBP15.45■□□□□ 0.06
PCDHGC3-207ENST00000622656 SCAF1Q9H7N4 1312 aaKnown RBP15.44■□□□□ 0.06
PCDHGC3-207ENST00000622656 RBM33Q96EV2 1170 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-207ENST00000622656 CHD2O14647 1828 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-207ENST00000622656 TOM1O60784 492 aa15.42■□□□□ 0.06
PCDHGC3-207ENST00000622656 CLTCL1P53675 1640 aa15.42■□□□□ 0.06
PCDHGC3-207ENST00000622656 HFM1A2PYH4 1435 aa15.42■□□□□ 0.06
PCDHGC3-207ENST00000622656 NWD1Q149M9 1564 aa15.41■□□□□ 0.06
PCDHGC3-207ENST00000622656 PLEKHG1Q9ULL1 1385 aa15.41■□□□□ 0.06
PCDHGC3-207ENST00000622656 HSPA1LP34931 641 aa15.41■□□□□ 0.06
PCDHGC3-207ENST00000622656 KCNA6P17658 529 aa15.39■□□□□ 0.05
PCDHGC3-207ENST00000622656 BCANQ96GW7 911 aa15.39■□□□□ 0.05
PCDHGC3-207ENST00000622656 ADAMTS13Q76LX8 1427 aa15.39■□□□□ 0.05
PCDHGC3-207ENST00000622656 TMEM94Q12767 1356 aa15.37■□□□□ 0.05
PCDHGC3-207ENST00000622656 NRXN3Q9Y4C0 1643 aa15.37■□□□□ 0.05
PCDHGC3-207ENST00000622656 PPP1R15AO75807 674 aaPredicted RBP15.37■□□□□ 0.05
PCDHGC3-207ENST00000622656 TRPM2O94759 1503 aa15.37■□□□□ 0.05
PCDHGC3-207ENST00000622656 KIF1BO60333 1816 aa15.36■□□□□ 0.05
PCDHGC3-207ENST00000622656 TRIM52Q96A61 297 aa15.36■□□□□ 0.05
PCDHGC3-207ENST00000622656 PROSER2Q86WR7 435 aaPredicted RBP15.35■□□□□ 0.05
PCDHGC3-207ENST00000622656 NKTRP30414 1462 aaKnown RBP15.33■□□□□ 0.05
PCDHGC3-207ENST00000622656 NEXMIFQ5QGS0 1516 aa15.33■□□□□ 0.05
PCDHGC3-207ENST00000622656 FOXD1Q16676 465 aa15.33■□□□□ 0.04
PCDHGC3-207ENST00000622656 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.33■□□□□ 0.04
PCDHGC3-207ENST00000622656 TBX22Q9Y458 520 aa15.33■□□□□ 0.04
PCDHGC3-207ENST00000622656 PTPRUQ92729 1446 aa15.33■□□□□ 0.04
PCDHGC3-207ENST00000622656 HDGFP51858 240 aaKnown RBP15.32■□□□□ 0.04
PCDHGC3-207ENST00000622656 DIP2AQ14689 1571 aa15.32■□□□□ 0.04
PCDHGC3-207ENST00000622656 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
PCDHGC3-207ENST00000622656 MED1Q15648 1581 aaPredicted RBP15.3■□□□□ 0.04
PCDHGC3-207ENST00000622656 ZNF326Q5BKZ1 582 aaKnown RBP15.3■□□□□ 0.04
PCDHGC3-207ENST00000622656 ROBO1Q9Y6N7 1651 aa15.3■□□□□ 0.04
PCDHGC3-207ENST00000622656 SETBP1Q9Y6X0 1596 aa15.3■□□□□ 0.04
PCDHGC3-207ENST00000622656 XRN1Q8IZH2 1706 aaKnown RBP15.28■□□□□ 0.04
PCDHGC3-207ENST00000622656 PPLO60437 1756 aa15.27■□□□□ 0.04
PCDHGC3-207ENST00000622656 SETD1AO15047 1707 aaKnown RBP15.27■□□□□ 0.04
PCDHGC3-207ENST00000622656 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.27■□□□□ 0.04
PCDHGC3-207ENST00000622656 METP08581 1390 aa15.26■□□□□ 0.03
PCDHGC3-207ENST00000622656 FAM135BQ49AJ0 1406 aa15.26■□□□□ 0.03
PCDHGC3-207ENST00000622656 PIK3R4Q99570 1358 aa15.25■□□□□ 0.03
PCDHGC3-207ENST00000622656 AMOTL2Q9Y2J4 779 aa15.25■□□□□ 0.03
PCDHGC3-207ENST00000622656 MSH6P52701 1360 aa15.24■□□□□ 0.03
PCDHGC3-207ENST00000622656 MPHOSPH9Q99550 1183 aa15.23■□□□□ 0.03
PCDHGC3-207ENST00000622656 IFT172Q9UG01 1749 aa15.21■□□□□ 0.03
PCDHGC3-207ENST00000622656 SETD5Q9C0A6 1442 aa15.21■□□□□ 0.03
PCDHGC3-207ENST00000622656 SLAIN2Q9P270 581 aa15.21■□□□□ 0.03
PCDHGC3-207ENST00000622656 PHLPP1O60346 1717 aa15.2■□□□□ 0.02
PCDHGC3-207ENST00000622656 NALCNQ8IZF0 1738 aa15.2■□□□□ 0.02
PCDHGC3-207ENST00000622656 NCOA3Q9Y6Q9 1424 aa15.19■□□□□ 0.02
PCDHGC3-207ENST00000622656 RAB3GAP2Q9H2M9 1393 aa15.19■□□□□ 0.02
PCDHGC3-207ENST00000622656 C14orf37Q86TY3 774 aa15.18■□□□□ 0.02
PCDHGC3-207ENST00000622656 SPATA31E1Q6ZUB1 1445 aa15.17■□□□□ 0.02
PCDHGC3-207ENST00000622656 CCDC144AA2RUR9 1427 aa15.17■□□□□ 0.02
PCDHGC3-207ENST00000622656 RGL3Q3MIN7 710 aa15.16■□□□□ 0.02
PCDHGC3-207ENST00000622656 C19orf44Q9H6X5 657 aa15.16■□□□□ 0.02
PCDHGC3-207ENST00000622656 COL16A1Q07092 1604 aaPredicted RBP15.16■□□□□ 0.02
PCDHGC3-207ENST00000622656 ADGRF5Q8IZF2 1346 aa15.16■□□□□ 0.02
PCDHGC3-207ENST00000622656 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
PCDHGC3-207ENST00000622656 RPGRIP1LQ68CZ1 1315 aa15.15■□□□□ 0.02
PCDHGC3-207ENST00000622656 ROBO2Q9HCK4 1378 aa15.13■□□□□ 0.01
PCDHGC3-207ENST00000622656 RGS17Q9UGC6 210 aaPredicted RBP15.13■□□□□ 0.01
PCDHGC3-207ENST00000622656 ASXL1Q8IXJ9 1541 aa15.12■□□□□ 0.01
PCDHGC3-207ENST00000622656 MST1RQ04912 1400 aa15.12■□□□□ 0.01
PCDHGC3-207ENST00000622656 ATF3P18847 181 aa15.12■□□□□ 0.01
PCDHGC3-207ENST00000622656 CADPS2Q86UW7 1296 aa15.12■□□□□ 0.01
PCDHGC3-207ENST00000622656 ADGRL3Q9HAR2 1447 aa15.11■□□□□ 0.01
PCDHGC3-207ENST00000622656 AHDC1Q5TGY3 1603 aaPredicted RBP15.11■□□□□ 0.01
PCDHGC3-207ENST00000622656 BRINP3Q76B58 766 aa15.11■□□□□ 0.01
PCDHGC3-207ENST00000622656 DCCP43146 1447 aa15.1■□□□□ 0.01
PCDHGC3-207ENST00000622656 PTCH1Q13635 1447 aa15.09■□□□□ 0.01
PCDHGC3-207ENST00000622656 PHF23Q9BUL5 403 aaPredicted RBP15.09■□□□□ 0.01
PCDHGC3-207ENST00000622656 NHSL1Q5SYE7 1610 aa15.09■□□□□ 0.01
PCDHGC3-207ENST00000622656 DDX17Q92841 729 aaKnown RBP15.08■□□□□ 0
PCDHGC3-207ENST00000622656 PRAG1Q86YV5 1406 aa15.08■□□□□ 0
PCDHGC3-207ENST00000622656 PIK3C2GO75747 1445 aa15.07■□□□□ 0
PCDHGC3-207ENST00000622656 LRP6O75581 1613 aa15.06■□□□□ 0
PCDHGC3-207ENST00000622656 TMEM132EQ6IEE7 984 aa15.06■□□□□ 0
PCDHGC3-207ENST00000622656 ANKRD30BQ9BXX2 1392 aa15.06■□□□□ 0
PCDHGC3-207ENST00000622656 JCADQ9P266 1359 aa15.06■□□□□ 0
PCDHGC3-207ENST00000622656 SHPRHQ149N8 1683 aa15.06■□□□□ 0
PCDHGC3-207ENST00000622656 STK26Q9P289 416 aa15.05■□□□□ -0
PCDHGC3-207ENST00000622656 KNDC1Q76NI1 1749 aa15.05■□□□□ -0
PCDHGC3-207ENST00000622656 C1orf167Q5SNV9 1468 aa15.04■□□□□ -0
PCDHGC3-207ENST00000622656 NRXN1Q9ULB1 1477 aa15.03■□□□□ -0
PCDHGC3-207ENST00000622656 PLEKHH1Q9ULM0 1364 aa15.03■□□□□ -0
PCDHGC3-207ENST00000622656 POTEAQ6S8J7 498 aa15.03■□□□□ -0
PCDHGC3-207ENST00000622656 WAPLQ7Z5K2 1190 aa15.03■□□□□ -0
PCDHGC3-207ENST00000622656 ORAI2Q96SN7 254 aa15.02■□□□□ -0
PCDHGC3-207ENST00000622656 MYOM2P54296 1465 aa15.01□□□□□ -0.01
PCDHGC3-207ENST00000622656 TECPR2O15040 1411 aa15.01□□□□□ -0.01
PCDHGC3-207ENST00000622656 LRPPRCP42704 1394 aaKnown RBP15.01□□□□□ -0.01
PCDHGC3-207ENST00000622656 ACIN1Q9UKV3 1341 aaKnown RBP15.01□□□□□ -0.01
PCDHGC3-207ENST00000622656 CFAP70Q5T0N1 1121 aa15.01□□□□□ -0.01
PCDHGC3-207ENST00000622656 LAMC1P11047 1609 aa15□□□□□ -0.01
PCDHGC3-207ENST00000622656 CDC42BPGQ6DT37 1551 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms