RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 PPP1R15AO75807 674 aaPredicted RBP27.93■■■□□ 2.06
SUSD3-205ENST00000617293 BCANQ96GW7 911 aa27.93■■■□□ 2.06
SUSD3-205ENST00000617293 ZNF326Q5BKZ1 582 aaKnown RBP27.92■■■□□ 2.06
SUSD3-205ENST00000617293 NUTM2DQ5VT03 806 aaPredicted RBP27.92■■■□□ 2.06
SUSD3-205ENST00000617293 SENP3Q9H4L4 574 aaPredicted RBP27.92■■■□□ 2.06
SUSD3-205ENST00000617293 ZFYVE9O95405 1425 aa27.92■■■□□ 2.06
SUSD3-205ENST00000617293 HRCP23327 699 aa27.91■■■□□ 2.06
SUSD3-205ENST00000617293 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.91■■■□□ 2.06
SUSD3-205ENST00000617293 KIF1BO60333 1816 aa27.89■■■□□ 2.06
SUSD3-205ENST00000617293 SLC26A8Q96RN1 970 aa27.86■■■□□ 2.05
SUSD3-205ENST00000617293 ILDR1Q86SU0 546 aaPredicted RBP27.85■■■□□ 2.05
SUSD3-205ENST00000617293 FBXO41Q8TF61 875 aa27.83■■■□□ 2.05
SUSD3-205ENST00000617293 PLEKHG1Q9ULL1 1385 aa27.83■■■□□ 2.05
SUSD3-205ENST00000617293 CCDC144AA2RUR9 1427 aa27.83■■■□□ 2.05
SUSD3-205ENST00000617293 CPS1P31327 1500 aa27.79■■■□□ 2.04
SUSD3-205ENST00000617293 TRIM26Q12899 539 aaPredicted RBP27.77■■■□□ 2.04
SUSD3-205ENST00000617293 STRCP1A6NGW2 1772 aa27.77■■■□□ 2.04
SUSD3-205ENST00000617293 NEXMIFQ5QGS0 1516 aa27.74■■■□□ 2.03
SUSD3-205ENST00000617293 RGL3Q3MIN7 710 aa27.74■■■□□ 2.03
SUSD3-205ENST00000617293 IQSEC2Q5JU85 1478 aa27.74■■■□□ 2.03
SUSD3-205ENST00000617293 TBX22Q9Y458 520 aa27.73■■■□□ 2.03
SUSD3-205ENST00000617293 RPGRIP1LQ68CZ1 1315 aa27.72■■■□□ 2.03
SUSD3-205ENST00000617293 KCNA6P17658 529 aa27.72■■■□□ 2.03
SUSD3-205ENST00000617293 ADAMTS13Q76LX8 1427 aa27.7■■■□□ 2.03
SUSD3-205ENST00000617293 VGFO15240 615 aaPredicted RBP27.7■■■□□ 2.02
SUSD3-205ENST00000617293 ANKRD30BQ9BXX2 1392 aa27.68■■■□□ 2.02
SUSD3-205ENST00000617293 LRRC7Q96NW7 1537 aa27.67■■■□□ 2.02
SUSD3-205ENST00000617293 SPATA31E1Q6ZUB1 1445 aa27.67■■■□□ 2.02
SUSD3-205ENST00000617293 PPLO60437 1756 aa27.65■■■□□ 2.02
SUSD3-205ENST00000617293 DIP2AQ14689 1571 aa27.65■■■□□ 2.02
SUSD3-205ENST00000617293 UBAP1LF5GYI3 381 aa27.64■■■□□ 2.02
SUSD3-205ENST00000617293 SETBP1Q9Y6X0 1596 aa27.64■■■□□ 2.01
SUSD3-205ENST00000617293 CHD2O14647 1828 aaKnown RBP27.63■■■□□ 2.01
SUSD3-205ENST00000617293 NRXN3Q9Y4C0 1643 aa27.63■■■□□ 2.01
SUSD3-205ENST00000617293 PROSER2Q86WR7 435 aaPredicted RBP27.62■■■□□ 2.01
SUSD3-205ENST00000617293 RBM33Q96EV2 1170 aaKnown RBP27.6■■■□□ 2.01
SUSD3-205ENST00000617293 NWD1Q149M9 1564 aa27.6■■■□□ 2.01
SUSD3-205ENST00000617293 PIK3R4Q99570 1358 aa27.6■■■□□ 2.01
SUSD3-205ENST00000617293 TOM1O60784 492 aa27.57■■■□□ 2
SUSD3-205ENST00000617293 AMOTL2Q9Y2J4 779 aa27.57■■■□□ 2
SUSD3-205ENST00000617293 ADGRF5Q8IZF2 1346 aa27.57■■■□□ 2
SUSD3-205ENST00000617293 METP08581 1390 aa27.56■■■□□ 2
SUSD3-205ENST00000617293 TMEM94Q12767 1356 aa27.56■■■□□ 2
SUSD3-205ENST00000617293 NKTRP30414 1462 aaKnown RBP27.56■■■□□ 2
SUSD3-205ENST00000617293 IFT172Q9UG01 1749 aa27.55■■■□□ 2
SUSD3-205ENST00000617293 XIRP1Q702N8 1843 aaKnown RBP27.55■■■□□ 2
SUSD3-205ENST00000617293 PTPRUQ92729 1446 aa27.54■■■□□ 2
SUSD3-205ENST00000617293 ALKQ9UM73 1620 aa27.52■■■□□ 2
SUSD3-205ENST00000617293 SCAF1Q9H7N4 1312 aaKnown RBP27.51■■□□□ 1.99
SUSD3-205ENST00000617293 PIP4K2BP78356 416 aa27.51■■□□□ 1.99
SUSD3-205ENST00000617293 C14orf37Q86TY3 774 aa27.46■■□□□ 1.99
SUSD3-205ENST00000617293 KDM2AQ9Y2K7 1162 aa27.46■■□□□ 1.99
SUSD3-205ENST00000617293 SETD1AO15047 1707 aaKnown RBP27.46■■□□□ 1.99
SUSD3-205ENST00000617293 DCAF11Q8TEB1 546 aa27.45■■□□□ 1.98
SUSD3-205ENST00000617293 XRN1Q8IZH2 1706 aaKnown RBP27.44■■□□□ 1.98
SUSD3-205ENST00000617293 PIK3C2GO75747 1445 aa27.43■■□□□ 1.98
SUSD3-205ENST00000617293 MSH6P52701 1360 aa27.43■■□□□ 1.98
SUSD3-205ENST00000617293 DHX57Q6P158 1386 aaKnown RBP27.42■■□□□ 1.98
SUSD3-205ENST00000617293 MYOM2P54296 1465 aa27.42■■□□□ 1.98
SUSD3-205ENST00000617293 NCOA3Q9Y6Q9 1424 aa27.4■■□□□ 1.98
SUSD3-205ENST00000617293 TMEM132EQ6IEE7 984 aa27.39■■□□□ 1.98
SUSD3-205ENST00000617293 CFAP70Q5T0N1 1121 aa27.38■■□□□ 1.97
SUSD3-205ENST00000617293 SIN3AQ96ST3 1273 aa27.38■■□□□ 1.97
SUSD3-205ENST00000617293 PHF23Q9BUL5 403 aaPredicted RBP27.38■■□□□ 1.97
SUSD3-205ENST00000617293 PCGF6Q9BYE7 350 aa27.38■■□□□ 1.97
SUSD3-205ENST00000617293 C14orf93Q9H972 538 aaKnown RBP27.38■■□□□ 1.97
SUSD3-205ENST00000617293 NRXN1Q9ULB1 1477 aa27.38■■□□□ 1.97
SUSD3-205ENST00000617293 STAC3Q96MF2 364 aa27.36■■□□□ 1.97
SUSD3-205ENST00000617293 C19orf44Q9H6X5 657 aa27.36■■□□□ 1.97
SUSD3-205ENST00000617293 STK26Q9P289 416 aa27.36■■□□□ 1.97
SUSD3-205ENST00000617293 NEUROD1Q13562 356 aa27.35■■□□□ 1.97
SUSD3-205ENST00000617293 ROBO2Q9HCK4 1378 aa27.33■■□□□ 1.97
SUSD3-205ENST00000617293 ATF3P18847 181 aa27.32■■□□□ 1.96
SUSD3-205ENST00000617293 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.31■■□□□ 1.96
SUSD3-205ENST00000617293 PTCH1Q13635 1447 aa27.31■■□□□ 1.96
SUSD3-205ENST00000617293 CADPS2Q86UW7 1296 aa27.3■■□□□ 1.96
SUSD3-205ENST00000617293 SLAIN2Q9P270 581 aa27.3■■□□□ 1.96
SUSD3-205ENST00000617293 ASXL1Q8IXJ9 1541 aa27.3■■□□□ 1.96
SUSD3-205ENST00000617293 HSPA1LP34931 641 aa27.29■■□□□ 1.96
SUSD3-205ENST00000617293 LRPPRCP42704 1394 aaKnown RBP27.29■■□□□ 1.96
SUSD3-205ENST00000617293 LAMC1P11047 1609 aa27.29■■□□□ 1.96
SUSD3-205ENST00000617293 YTHDC2Q9H6S0 1430 aaKnown RBP27.27■■□□□ 1.96
SUSD3-205ENST00000617293 PRAG1Q86YV5 1406 aa27.26■■□□□ 1.95
SUSD3-205ENST00000617293 ABCC11Q96J66 1382 aa27.26■■□□□ 1.95
SUSD3-205ENST00000617293 L3MBTL2Q969R5 705 aa27.25■■□□□ 1.95
SUSD3-205ENST00000617293 FAM135BQ49AJ0 1406 aa27.24■■□□□ 1.95
SUSD3-205ENST00000617293 ADGRL3Q9HAR2 1447 aa27.24■■□□□ 1.95
SUSD3-205ENST00000617293 WAPLQ7Z5K2 1190 aa27.24■■□□□ 1.95
SUSD3-205ENST00000617293 TECPR2O15040 1411 aa27.23■■□□□ 1.95
SUSD3-205ENST00000617293 NALCNQ8IZF0 1738 aa27.22■■□□□ 1.95
SUSD3-205ENST00000617293 ROBO1Q9Y6N7 1651 aa27.21■■□□□ 1.95
SUSD3-205ENST00000617293 DCCP43146 1447 aa27.21■■□□□ 1.95
SUSD3-205ENST00000617293 KNDC1Q76NI1 1749 aa27.21■■□□□ 1.95
SUSD3-205ENST00000617293 SIRT1Q96EB6 747 aa27.18■■□□□ 1.94
SUSD3-205ENST00000617293 PLEKHH1Q9ULM0 1364 aa27.18■■□□□ 1.94
SUSD3-205ENST00000617293 ADGRB1O14514 1584 aa27.18■■□□□ 1.94
SUSD3-205ENST00000617293 TRAK1Q9UPV9 953 aa27.17■■□□□ 1.94
SUSD3-205ENST00000617293 PRAM1Q96QH2 718 aa27.14■■□□□ 1.94
SUSD3-205ENST00000617293 MST1RQ04912 1400 aa27.14■■□□□ 1.93
SUSD3-205ENST00000617293 SAFB2Q14151 953 aaKnown RBP eCLIP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms