RNA–Protein interactions for RNA: ENST00000617248.4

PDE4DIP-243, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 4

Gene PDE4DIP, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-243ENST00000617248 DDRGK1Q96HY6 314 aa14.4□□□□□ -0.1
PDE4DIP-243ENST00000617248 WDR97A6NE52 1622 aa14.39□□□□□ -0.11
PDE4DIP-243ENST00000617248 MDM2Q00987 491 aaPredicted RBP14.38□□□□□ -0.11
PDE4DIP-243ENST00000617248 ERICH6Q7L0X2 663 aa14.38□□□□□ -0.11
PDE4DIP-243ENST00000617248 NLRP7Q8WX94 980 aa14.38□□□□□ -0.11
PDE4DIP-243ENST00000617248 ADGRG1Q9Y653 693 aa14.38□□□□□ -0.11
PDE4DIP-243ENST00000617248 URB2Q14146 1524 aaKnown RBP14.37□□□□□ -0.11
PDE4DIP-243ENST00000617248 KIF21AQ7Z4S6 1674 aa14.37□□□□□ -0.11
PDE4DIP-243ENST00000617248 METTL3Q86U44 580 aaKnown RBP14.37□□□□□ -0.11
PDE4DIP-243ENST00000617248 COL9A1P20849 921 aa14.36□□□□□ -0.11
PDE4DIP-243ENST00000617248 PXYLP1Q8TE99 480 aa14.35□□□□□ -0.11
PDE4DIP-243ENST00000617248 RBM27Q9P2N5 1060 aaKnown RBP14.35□□□□□ -0.11
PDE4DIP-243ENST00000617248 FAM198AQ9UFP1 575 aa14.35□□□□□ -0.11
PDE4DIP-243ENST00000617248 PRSS12P56730 875 aa14.34□□□□□ -0.11
PDE4DIP-243ENST00000617248 CDCA7LQ96GN5 454 aa14.34□□□□□ -0.11
PDE4DIP-243ENST00000617248 HOXB1P14653 301 aaPredicted RBP14.33□□□□□ -0.12
PDE4DIP-243ENST00000617248 CLCN1P35523 988 aa14.33□□□□□ -0.12
PDE4DIP-243ENST00000617248 PPP4R3BQ5MIZ7 849 aa14.33□□□□□ -0.12
PDE4DIP-243ENST00000617248 OTUD5Q96G74 571 aa14.33□□□□□ -0.12
PDE4DIP-243ENST00000617248 BCL2L12Q9HB09 334 aa14.33□□□□□ -0.12
PDE4DIP-243ENST00000617248 GPCPD1Q9NPB8 672 aa14.33□□□□□ -0.12
PDE4DIP-243ENST00000617248 ABCA5Q8WWZ7 1642 aa14.32□□□□□ -0.12
PDE4DIP-243ENST00000617248 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
PDE4DIP-243ENST00000617248 OATP04181 439 aa14.31□□□□□ -0.12
PDE4DIP-243ENST00000617248 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
PDE4DIP-243ENST00000617248 ARAP1Q96P48 1450 aa14.3□□□□□ -0.12
PDE4DIP-243ENST00000617248 SNPHO15079 494 aa14.29□□□□□ -0.12
PDE4DIP-243ENST00000617248 SSTR3P32745 418 aaPredicted RBP14.29□□□□□ -0.12
PDE4DIP-243ENST00000617248 EFCAB5A4FU69 1503 aa14.29□□□□□ -0.12
PDE4DIP-243ENST00000617248 PSDA5PKW4 1024 aaPredicted RBP14.28□□□□□ -0.12
PDE4DIP-243ENST00000617248 MAP3K1Q13233 1512 aa14.28□□□□□ -0.12
PDE4DIP-243ENST00000617248 CTTNBP2Q8WZ74 1663 aa14.28□□□□□ -0.12
PDE4DIP-243ENST00000617248 GAPVD1Q14C86 1478 aa14.27□□□□□ -0.12
PDE4DIP-243ENST00000617248 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
PDE4DIP-243ENST00000617248 C3orf80F5H4A9 247 aa14.27□□□□□ -0.13
PDE4DIP-243ENST00000617248 FAM217BQ9NTX9 383 aaPredicted RBP14.27□□□□□ -0.13
PDE4DIP-243ENST00000617248 TSKSQ9UJT2 592 aa14.27□□□□□ -0.13
PDE4DIP-243ENST00000617248 ARHGAP35Q9NRY4 1499 aa14.26□□□□□ -0.13
PDE4DIP-243ENST00000617248 TARBP1Q13395 1621 aaKnown RBP14.26□□□□□ -0.13
PDE4DIP-243ENST00000617248 PPP1R3GB7ZBB8 358 aa14.25□□□□□ -0.13
PDE4DIP-243ENST00000617248 PTPREP23469 700 aa14.24□□□□□ -0.13
PDE4DIP-243ENST00000617248 GOPCQ9HD26 462 aa14.24□□□□□ -0.13
PDE4DIP-243ENST00000617248 WDR62O43379 1518 aa14.23□□□□□ -0.13
PDE4DIP-243ENST00000617248 EYA1Q99502 592 aa14.22□□□□□ -0.13
PDE4DIP-243ENST00000617248 IFT140Q96RY7 1462 aa14.22□□□□□ -0.13
PDE4DIP-243ENST00000617248 PPARGC1BQ86YN6 1023 aaKnown RBP14.21□□□□□ -0.13
PDE4DIP-243ENST00000617248 RBM46Q8TBY0 533 aaKnown RBP14.21□□□□□ -0.13
PDE4DIP-243ENST00000617248 BEGAINQ9BUH8 593 aa14.21□□□□□ -0.13
PDE4DIP-243ENST00000617248 PBRM1Q86U86 1689 aa14.19□□□□□ -0.14
PDE4DIP-243ENST00000617248 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.14
PDE4DIP-243ENST00000617248 RCCD1A6NED2 376 aa14.18□□□□□ -0.14
PDE4DIP-243ENST00000617248 TRIM6-TRIM34B2RNG4 842 aa14.17□□□□□ -0.14
PDE4DIP-243ENST00000617248 PROX2Q3B8N5 592 aa14.17□□□□□ -0.14
PDE4DIP-243ENST00000617248 SH3D19Q5HYK7 790 aa14.17□□□□□ -0.14
PDE4DIP-243ENST00000617248 NUDT18Q6ZVK8 323 aa14.17□□□□□ -0.14
PDE4DIP-243ENST00000617248 KCNK17Q96T54 332 aa14.16□□□□□ -0.14
PDE4DIP-243ENST00000617248 GRIN2BQ13224 1484 aa14.16□□□□□ -0.14
PDE4DIP-243ENST00000617248 FMN1Q68DA7 1419 aa14.15□□□□□ -0.14
PDE4DIP-243ENST00000617248 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
PDE4DIP-243ENST00000617248 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.15□□□□□ -0.14
PDE4DIP-243ENST00000617248 RANGAP1P46060 587 aaPredicted RBP14.14□□□□□ -0.15
PDE4DIP-243ENST00000617248 TATDN2Q93075 761 aa14.14□□□□□ -0.15
PDE4DIP-243ENST00000617248 ERCC6Q03468 1493 aa14.13□□□□□ -0.15
PDE4DIP-243ENST00000617248 FYCO1Q9BQS8 1478 aa14.13□□□□□ -0.15
PDE4DIP-243ENST00000617248 LHX8Q68G74 356 aa14.13□□□□□ -0.15
PDE4DIP-243ENST00000617248 PCMTD1Q96MG8 357 aaPredicted RBP14.13□□□□□ -0.15
PDE4DIP-243ENST00000617248 PNMA3Q9UL41 463 aa14.13□□□□□ -0.15
PDE4DIP-243ENST00000617248 TIAM1Q13009 1591 aa14.13□□□□□ -0.15
PDE4DIP-243ENST00000617248 SMAPO00193 183 aa14.12□□□□□ -0.15
PDE4DIP-243ENST00000617248 POTEEQ6S8J3 1075 aa14.12□□□□□ -0.15
PDE4DIP-243ENST00000617248 PSEN2P49810 448 aa14.11□□□□□ -0.15
PDE4DIP-243ENST00000617248 ADAMTS12P58397 1594 aa14.11□□□□□ -0.15
PDE4DIP-243ENST00000617248 SKIV2LQ15477 1246 aaKnown RBP14.11□□□□□ -0.15
PDE4DIP-243ENST00000617248 SAMD9Q5K651 1589 aa14.11□□□□□ -0.15
PDE4DIP-243ENST00000617248 CCER1Q8TC90 406 aaPredicted RBP14.11□□□□□ -0.15
PDE4DIP-243ENST00000617248 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
PDE4DIP-243ENST00000617248 CASKIN1Q8WXD9 1431 aa14.1□□□□□ -0.15
PDE4DIP-243ENST00000617248 RRBP1Q9P2E9 1410 aaKnown RBP14.1□□□□□ -0.15
PDE4DIP-243ENST00000617248 NBPF26B4DH59 902 aa14.1□□□□□ -0.15
PDE4DIP-243ENST00000617248 MYSM1Q5VVJ2 828 aa14.09□□□□□ -0.15
PDE4DIP-243ENST00000617248 PROCA1Q8NCQ7 364 aaPredicted RBP14.09□□□□□ -0.15
PDE4DIP-243ENST00000617248 ZBED2Q9BTP6 218 aa14.09□□□□□ -0.15
PDE4DIP-243ENST00000617248 RSPH6AQ9H0K4 717 aa14.09□□□□□ -0.15
PDE4DIP-243ENST00000617248 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
PDE4DIP-243ENST00000617248 ONECUT3O60422 494 aaPredicted RBP14.08□□□□□ -0.16
PDE4DIP-243ENST00000617248 PACS2Q86VP3 889 aa14.08□□□□□ -0.16
PDE4DIP-243ENST00000617248 POLR3EQ9NVU0 708 aa14.08□□□□□ -0.16
PDE4DIP-243ENST00000617248 CD46P15529 392 aa14.07□□□□□ -0.16
PDE4DIP-243ENST00000617248 DNAJB2P25686 324 aa14.07□□□□□ -0.16
PDE4DIP-243ENST00000617248 VARS2Q5ST30 1063 aaKnown RBP14.07□□□□□ -0.16
PDE4DIP-243ENST00000617248 TMEM134Q9H6X4 195 aa14.07□□□□□ -0.16
PDE4DIP-243ENST00000617248 ST18O60284 1047 aa14.06□□□□□ -0.16
PDE4DIP-243ENST00000617248 TBC1D2Q9BYX2 928 aa14.06□□□□□ -0.16
PDE4DIP-243ENST00000617248 ERBB3P21860 1342 aa14.06□□□□□ -0.16
PDE4DIP-243ENST00000617248 TTBK1Q5TCY1 1321 aaPredicted RBP14.06□□□□□ -0.16
PDE4DIP-243ENST00000617248 LRRC9Q6ZRR7 1453 aa14.05□□□□□ -0.16
PDE4DIP-243ENST00000617248 PCF11O94913 1555 aaKnown RBP14.05□□□□□ -0.16
PDE4DIP-243ENST00000617248 IQGAP2Q13576 1575 aa14.05□□□□□ -0.16
PDE4DIP-243ENST00000617248 ZMYND15Q9H091 742 aa14.04□□□□□ -0.16
PDE4DIP-243ENST00000617248 KIAA1468Q9P260 1216 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms