RNA–Protein interactions for RNA: ENST00000617248.4

PDE4DIP-243, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 4

Gene PDE4DIP, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-243ENST00000617248 AEBP2Q6ZN18 517 aaPredicted RBP31.37■■■□□ 2.61
PDE4DIP-243ENST00000617248 CHIC1Q5VXU3 224 aa31.16■■■□□ 2.58
PDE4DIP-243ENST00000617248 PHF23Q9BUL5 403 aaPredicted RBP27.56■■■□□ 2
PDE4DIP-243ENST00000617248 SENP3Q9H4L4 574 aaPredicted RBP26.33■■□□□ 1.81
PDE4DIP-243ENST00000617248 PLPPR3Q6T4P5 718 aa25.52■■□□□ 1.68
PDE4DIP-243ENST00000617248 FOXD1Q16676 465 aa24.48■■□□□ 1.51
PDE4DIP-243ENST00000617248 PPP6R1Q9UPN7 881 aa24.12■■□□□ 1.45
PDE4DIP-243ENST00000617248 ADRA2BP18089 450 aa24.1■■□□□ 1.45
PDE4DIP-243ENST00000617248 PIAS4Q8N2W9 510 aaPredicted RBP23.17■■□□□ 1.3
PDE4DIP-243ENST00000617248 KCNA4P22459 653 aa22.89■■□□□ 1.25
PDE4DIP-243ENST00000617248 PPP4R3CPQ6ZMV5 832 aa22.63■■□□□ 1.21
PDE4DIP-243ENST00000617248 MSH5O43196 834 aa22.18■■□□□ 1.14
PDE4DIP-243ENST00000617248 NCBP3Q53F19 620 aaKnown RBP22.09■■□□□ 1.13
PDE4DIP-243ENST00000617248 EHMT2Q96KQ7 1210 aa22■■□□□ 1.11
PDE4DIP-243ENST00000617248 NPM3O75607 178 aaKnown RBP21.92■■□□□ 1.1
PDE4DIP-243ENST00000617248 SCAF1Q9H7N4 1312 aaKnown RBP21.85■■□□□ 1.09
PDE4DIP-243ENST00000617248 SLC4A1APQ9BWU0 796 aaKnown RBP21.84■■□□□ 1.09
PDE4DIP-243ENST00000617248 CNKSR2Q8WXI2 1034 aa21.8■■□□□ 1.08
PDE4DIP-243ENST00000617248 MAPK8IP2Q13387 824 aaPredicted RBP21.7■■□□□ 1.06
PDE4DIP-243ENST00000617248 CSRNP3Q8WYN3 585 aa21.51■■□□□ 1.03
PDE4DIP-243ENST00000617248 RNF216Q9NWF9 866 aaPredicted RBP21.22■□□□□ 0.99
PDE4DIP-243ENST00000617248 DMRT2Q9Y5R5 561 aa21.17■□□□□ 0.98
PDE4DIP-243ENST00000617248 ZBTB22O15209 634 aa21.14■□□□□ 0.97
PDE4DIP-243ENST00000617248 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
PDE4DIP-243ENST00000617248 HOXD11P31277 338 aaPredicted RBP21■□□□□ 0.95
PDE4DIP-243ENST00000617248 FOXD4L1Q9NU39 408 aa20.81■□□□□ 0.92
PDE4DIP-243ENST00000617248 SLC4A2P04920 1241 aa20.59■□□□□ 0.89
PDE4DIP-243ENST00000617248 NISCHQ9Y2I1 1504 aa20.48■□□□□ 0.87
PDE4DIP-243ENST00000617248 DCAF8L1A6NGE4 600 aa20.18■□□□□ 0.82
PDE4DIP-243ENST00000617248 MYCNP04198 464 aaPredicted RBP20.17■□□□□ 0.82
PDE4DIP-243ENST00000617248 ATXN8OSP0DMR3 200 aa19.97■□□□□ 0.79
PDE4DIP-243ENST00000617248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.95■□□□□ 0.78
PDE4DIP-243ENST00000617248 U3KPZ7 1027 aaPredicted RBP19.81■□□□□ 0.76
PDE4DIP-243ENST00000617248 ATF5Q9Y2D1 282 aaPredicted RBP19.73■□□□□ 0.75
PDE4DIP-243ENST00000617248 SAMD1Q6SPF0 538 aaPredicted RBP19.59■□□□□ 0.73
PDE4DIP-243ENST00000617248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.72
PDE4DIP-243ENST00000617248 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.72
PDE4DIP-243ENST00000617248 FKBP8Q14318 412 aa19.34■□□□□ 0.69
PDE4DIP-243ENST00000617248 ZNF219Q9P2Y4 722 aaPredicted RBP19.23■□□□□ 0.67
PDE4DIP-243ENST00000617248 APLP2Q06481 763 aa19.19■□□□□ 0.66
PDE4DIP-243ENST00000617248 POTEDQ86YR6 584 aa19.18■□□□□ 0.66
PDE4DIP-243ENST00000617248 RNF39Q9H2S5 420 aa19.15■□□□□ 0.66
PDE4DIP-243ENST00000617248 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.64
PDE4DIP-243ENST00000617248 TRHP20396 242 aaPredicted RBP18.96■□□□□ 0.63
PDE4DIP-243ENST00000617248 MKRN4PQ13434 485 aaPredicted RBP18.89■□□□□ 0.61
PDE4DIP-243ENST00000617248 C1QBPQ07021 282 aaKnown RBP18.88■□□□□ 0.61
PDE4DIP-243ENST00000617248 CAPN15O75808 1086 aa18.87■□□□□ 0.61
PDE4DIP-243ENST00000617248 POLA2Q14181 598 aa18.81■□□□□ 0.6
PDE4DIP-243ENST00000617248 RTN4Q9NQC3 1192 aaKnown RBP18.8■□□□□ 0.6
PDE4DIP-243ENST00000617248 AMER1Q5JTC6 1135 aaPredicted RBP18.68■□□□□ 0.58
PDE4DIP-243ENST00000617248 SPDYE4A6NLX3 237 aa18.67■□□□□ 0.58
PDE4DIP-243ENST00000617248 FBLN2P98095 1184 aa18.65■□□□□ 0.58
PDE4DIP-243ENST00000617248 ABCB7O75027 752 aa18.63■□□□□ 0.57
PDE4DIP-243ENST00000617248 PROM2Q8N271 834 aa18.51■□□□□ 0.55
PDE4DIP-243ENST00000617248 DSG3P32926 999 aa18.47■□□□□ 0.55
PDE4DIP-243ENST00000617248 ZBTB12Q9Y330 459 aaPredicted RBP18.41■□□□□ 0.54
PDE4DIP-243ENST00000617248 FBXO3Q9UK99 471 aa18.35■□□□□ 0.53
PDE4DIP-243ENST00000617248 VASPP50552 380 aaPredicted RBP18.19■□□□□ 0.5
PDE4DIP-243ENST00000617248 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
PDE4DIP-243ENST00000617248 CACNB1Q02641 598 aaPredicted RBP18.13■□□□□ 0.49
PDE4DIP-243ENST00000617248 ZNF692Q9BU19 519 aaPredicted RBP18.09■□□□□ 0.49
PDE4DIP-243ENST00000617248 SPDYE2BA6NHP3 402 aa18.05■□□□□ 0.48
PDE4DIP-243ENST00000617248 SPDYE6P0CI01 402 aa18.05■□□□□ 0.48
PDE4DIP-243ENST00000617248 SPDYE2Q495Y8 402 aa18.05■□□□□ 0.48
PDE4DIP-243ENST00000617248 IFNLR1Q8IU57 520 aaPredicted RBP18.05■□□□□ 0.48
PDE4DIP-243ENST00000617248 SSUH2Q9Y2M2 353 aa18.04■□□□□ 0.48
PDE4DIP-243ENST00000617248 SLC24A1O60721 1099 aa17.95■□□□□ 0.46
PDE4DIP-243ENST00000617248 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
PDE4DIP-243ENST00000617248 CCDC180Q9P1Z9 1646 aa17.86■□□□□ 0.45
PDE4DIP-243ENST00000617248 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
PDE4DIP-243ENST00000617248 PKD2Q13563 968 aa17.71■□□□□ 0.43
PDE4DIP-243ENST00000617248 KLHL34Q8N239 644 aa17.66■□□□□ 0.42
PDE4DIP-243ENST00000617248 PLCD3Q8N3E9 789 aa17.63■□□□□ 0.41
PDE4DIP-243ENST00000617248 SPOCK2Q92563 424 aa17.63■□□□□ 0.41
PDE4DIP-243ENST00000617248 MIER1Q8N108 512 aa17.6■□□□□ 0.41
PDE4DIP-243ENST00000617248 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
PDE4DIP-243ENST00000617248 RBM42Q9BTD8 480 aaKnown RBP17.44■□□□□ 0.38
PDE4DIP-243ENST00000617248 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
PDE4DIP-243ENST00000617248 ECM2O94769 699 aaPredicted RBP17.38■□□□□ 0.37
PDE4DIP-243ENST00000617248 PLEKHG5O94827 1062 aa17.34■□□□□ 0.37
PDE4DIP-243ENST00000617248 SPDYE1Q8NFV5 336 aaPredicted RBP17.34■□□□□ 0.37
PDE4DIP-243ENST00000617248 PLCB2Q00722 1185 aa17.32■□□□□ 0.36
PDE4DIP-243ENST00000617248 ZBTB47Q9UFB7 747 aaPredicted RBP17.32■□□□□ 0.36
PDE4DIP-243ENST00000617248 REM2Q8IYK8 340 aaPredicted RBP17.31■□□□□ 0.36
PDE4DIP-243ENST00000617248 RGL2O15211 777 aa17.28■□□□□ 0.36
PDE4DIP-243ENST00000617248 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.36
PDE4DIP-243ENST00000617248 ZCCHC6Q5VYS8 1495 aaKnown RBP17.25■□□□□ 0.35
PDE4DIP-243ENST00000617248 CIZ1Q9ULV3 898 aaPredicted RBP17.25■□□□□ 0.35
PDE4DIP-243ENST00000617248 NPM1P06748 294 aaKnown RBP eCLIP17.21■□□□□ 0.35
PDE4DIP-243ENST00000617248 CREBZFQ9NS37 354 aa17.21■□□□□ 0.35
PDE4DIP-243ENST00000617248 PRR29P0C7W0 189 aa17.18■□□□□ 0.34
PDE4DIP-243ENST00000617248 NUBP1P53384 320 aa17.17■□□□□ 0.34
PDE4DIP-243ENST00000617248 MNX1P50219 401 aaPredicted RBP17.15■□□□□ 0.34
PDE4DIP-243ENST00000617248 PITPNM1O00562 1244 aa17.12■□□□□ 0.33
PDE4DIP-243ENST00000617248 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
PDE4DIP-243ENST00000617248 BBXQ8WY36 941 aaPredicted RBP17.07■□□□□ 0.32
PDE4DIP-243ENST00000617248 HAP1P54257 671 aaPredicted RBP17.06■□□□□ 0.32
PDE4DIP-243ENST00000617248 GSE1Q14687 1217 aa17.03■□□□□ 0.32
PDE4DIP-243ENST00000617248 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
PDE4DIP-243ENST00000617248 RNF25Q96BH1 459 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms