RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 EID1Q9Y6B2 187 aa15.63■□□□□ 0.09
LINC01001-203ENST00000607448 ALKQ9UM73 1620 aa15.63■□□□□ 0.09
LINC01001-203ENST00000607448 LRRC7Q96NW7 1537 aa15.63■□□□□ 0.09
LINC01001-203ENST00000607448 SENP3Q9H4L4 574 aaPredicted RBP15.62■□□□□ 0.09
LINC01001-203ENST00000607448 RIMS2Q9UQ26 1411 aa15.61■□□□□ 0.09
LINC01001-203ENST00000607448 TRPM2O94759 1503 aa15.6■□□□□ 0.09
LINC01001-203ENST00000607448 CHGAP10645 457 aaKnown RBP15.6■□□□□ 0.09
LINC01001-203ENST00000607448 KIF1BO60333 1816 aa15.6■□□□□ 0.09
LINC01001-203ENST00000607448 CHD2O14647 1828 aaKnown RBP15.59■□□□□ 0.09
LINC01001-203ENST00000607448 UBAP1LF5GYI3 381 aa15.59■□□□□ 0.09
LINC01001-203ENST00000607448 SLC26A8Q96RN1 970 aa15.59■□□□□ 0.09
LINC01001-203ENST00000607448 NUTM2DQ5VT03 806 aaPredicted RBP15.58■□□□□ 0.09
LINC01001-203ENST00000607448 NWD1Q149M9 1564 aa15.57■□□□□ 0.08
LINC01001-203ENST00000607448 TRIM52Q96A61 297 aa15.57■□□□□ 0.08
LINC01001-203ENST00000607448 NRXN3Q9Y4C0 1643 aa15.56■□□□□ 0.08
LINC01001-203ENST00000607448 PLEKHG1Q9ULL1 1385 aa15.55■□□□□ 0.08
LINC01001-203ENST00000607448 NEXMIFQ5QGS0 1516 aa15.53■□□□□ 0.08
LINC01001-203ENST00000607448 ADAMTS13Q76LX8 1427 aa15.53■□□□□ 0.08
LINC01001-203ENST00000607448 PPP1R15AO75807 674 aaPredicted RBP15.53■□□□□ 0.08
LINC01001-203ENST00000607448 FOXD1Q16676 465 aa15.52■□□□□ 0.07
LINC01001-203ENST00000607448 BCANQ96GW7 911 aa15.52■□□□□ 0.07
LINC01001-203ENST00000607448 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.07
LINC01001-203ENST00000607448 PIP4K2BP78356 416 aa15.51■□□□□ 0.07
LINC01001-203ENST00000607448 RBM33Q96EV2 1170 aaKnown RBP15.51■□□□□ 0.07
LINC01001-203ENST00000607448 DIP2AQ14689 1571 aa15.51■□□□□ 0.07
LINC01001-203ENST00000607448 PPLO60437 1756 aa15.5■□□□□ 0.07
LINC01001-203ENST00000607448 KCNA6P17658 529 aa15.49■□□□□ 0.07
LINC01001-203ENST00000607448 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
LINC01001-203ENST00000607448 NKTRP30414 1462 aaKnown RBP15.49■□□□□ 0.07
LINC01001-203ENST00000607448 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.49■□□□□ 0.07
LINC01001-203ENST00000607448 TMEM94Q12767 1356 aa15.49■□□□□ 0.07
LINC01001-203ENST00000607448 SETBP1Q9Y6X0 1596 aa15.49■□□□□ 0.07
LINC01001-203ENST00000607448 SETD1AO15047 1707 aaKnown RBP15.48■□□□□ 0.07
LINC01001-203ENST00000607448 SETD5Q9C0A6 1442 aa15.48■□□□□ 0.07
LINC01001-203ENST00000607448 TOM1O60784 492 aa15.48■□□□□ 0.07
LINC01001-203ENST00000607448 HDGFP51858 240 aaKnown RBP15.47■□□□□ 0.07
LINC01001-203ENST00000607448 ZNF326Q5BKZ1 582 aaKnown RBP15.47■□□□□ 0.07
LINC01001-203ENST00000607448 IFT172Q9UG01 1749 aa15.46■□□□□ 0.07
LINC01001-203ENST00000607448 PTPRUQ92729 1446 aa15.46■□□□□ 0.06
LINC01001-203ENST00000607448 XRN1Q8IZH2 1706 aaKnown RBP15.46■□□□□ 0.06
LINC01001-203ENST00000607448 TBX22Q9Y458 520 aa15.45■□□□□ 0.06
LINC01001-203ENST00000607448 RAB3GAP2Q9H2M9 1393 aa15.45■□□□□ 0.06
LINC01001-203ENST00000607448 MPHOSPH9Q99550 1183 aa15.45■□□□□ 0.06
LINC01001-203ENST00000607448 HSPA1LP34931 641 aa15.44■□□□□ 0.06
LINC01001-203ENST00000607448 PROSER2Q86WR7 435 aaPredicted RBP15.44■□□□□ 0.06
LINC01001-203ENST00000607448 ROBO1Q9Y6N7 1651 aa15.42■□□□□ 0.06
LINC01001-203ENST00000607448 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.42■□□□□ 0.06
LINC01001-203ENST00000607448 METP08581 1390 aa15.4■□□□□ 0.06
LINC01001-203ENST00000607448 CCDC144AA2RUR9 1427 aa15.4■□□□□ 0.06
LINC01001-203ENST00000607448 PIK3R4Q99570 1358 aa15.4■□□□□ 0.06
LINC01001-203ENST00000607448 SPATA31E1Q6ZUB1 1445 aa15.38■□□□□ 0.05
LINC01001-203ENST00000607448 NALCNQ8IZF0 1738 aa15.38■□□□□ 0.05
LINC01001-203ENST00000607448 AMOTL2Q9Y2J4 779 aa15.37■□□□□ 0.05
LINC01001-203ENST00000607448 MSH6P52701 1360 aa15.37■□□□□ 0.05
LINC01001-203ENST00000607448 DISP3Q9P2K9 1392 aa15.36■□□□□ 0.05
LINC01001-203ENST00000607448 MED1Q15648 1581 aaPredicted RBP15.35■□□□□ 0.05
LINC01001-203ENST00000607448 RGL3Q3MIN7 710 aa15.34■□□□□ 0.05
LINC01001-203ENST00000607448 FAM135BQ49AJ0 1406 aa15.33■□□□□ 0.05
LINC01001-203ENST00000607448 RPGRIP1LQ68CZ1 1315 aa15.33■□□□□ 0.04
LINC01001-203ENST00000607448 PHLPP1O60346 1717 aa15.33■□□□□ 0.04
LINC01001-203ENST00000607448 NCOA3Q9Y6Q9 1424 aa15.33■□□□□ 0.04
LINC01001-203ENST00000607448 VGFO15240 615 aaPredicted RBP15.32■□□□□ 0.04
LINC01001-203ENST00000607448 ADGRF5Q8IZF2 1346 aa15.32■□□□□ 0.04
LINC01001-203ENST00000607448 ASXL1Q8IXJ9 1541 aa15.32■□□□□ 0.04
LINC01001-203ENST00000607448 C14orf37Q86TY3 774 aa15.3■□□□□ 0.04
LINC01001-203ENST00000607448 SLAIN2Q9P270 581 aa15.29■□□□□ 0.04
LINC01001-203ENST00000607448 CLSPNQ9HAW4 1339 aa15.29■□□□□ 0.04
LINC01001-203ENST00000607448 ILDR2Q71H61 639 aa15.28■□□□□ 0.04
LINC01001-203ENST00000607448 ACIN1Q9UKV3 1341 aaKnown RBP15.28■□□□□ 0.04
LINC01001-203ENST00000607448 ANKRD30BQ9BXX2 1392 aa15.28■□□□□ 0.04
LINC01001-203ENST00000607448 ROBO2Q9HCK4 1378 aa15.28■□□□□ 0.04
LINC01001-203ENST00000607448 COL16A1Q07092 1604 aaPredicted RBP15.28■□□□□ 0.04
LINC01001-203ENST00000607448 PIK3C2GO75747 1445 aa15.28■□□□□ 0.04
LINC01001-203ENST00000607448 DIEXFQ68CQ4 756 aaKnown RBP15.28■□□□□ 0.04
LINC01001-203ENST00000607448 KNDC1Q76NI1 1749 aa15.28■□□□□ 0.04
LINC01001-203ENST00000607448 C19orf44Q9H6X5 657 aa15.28■□□□□ 0.04
LINC01001-203ENST00000607448 PTCH1Q13635 1447 aa15.27■□□□□ 0.03
LINC01001-203ENST00000607448 ADGRL3Q9HAR2 1447 aa15.26■□□□□ 0.03
LINC01001-203ENST00000607448 NRXN1Q9ULB1 1477 aa15.25■□□□□ 0.03
LINC01001-203ENST00000607448 DCCP43146 1447 aa15.25■□□□□ 0.03
LINC01001-203ENST00000607448 PRAG1Q86YV5 1406 aa15.25■□□□□ 0.03
LINC01001-203ENST00000607448 ZNF316A6NFI3 1004 aaPredicted RBP15.25■□□□□ 0.03
LINC01001-203ENST00000607448 MYOM2P54296 1465 aa15.25■□□□□ 0.03
LINC01001-203ENST00000607448 MST1RQ04912 1400 aa15.25■□□□□ 0.03
LINC01001-203ENST00000607448 NHSL1Q5SYE7 1610 aa15.24■□□□□ 0.03
LINC01001-203ENST00000607448 CADPS2Q86UW7 1296 aa15.24■□□□□ 0.03
LINC01001-203ENST00000607448 LAMC1P11047 1609 aa15.24■□□□□ 0.03
LINC01001-203ENST00000607448 AHDC1Q5TGY3 1603 aaPredicted RBP15.24■□□□□ 0.03
LINC01001-203ENST00000607448 ATF3P18847 181 aa15.24■□□□□ 0.03
LINC01001-203ENST00000607448 TMEM132EQ6IEE7 984 aa15.22■□□□□ 0.03
LINC01001-203ENST00000607448 BRINP3Q76B58 766 aa15.2■□□□□ 0.02
LINC01001-203ENST00000607448 TECPR2O15040 1411 aa15.2■□□□□ 0.02
LINC01001-203ENST00000607448 SHPRHQ149N8 1683 aa15.2■□□□□ 0.02
LINC01001-203ENST00000607448 STK26Q9P289 416 aa15.19■□□□□ 0.02
LINC01001-203ENST00000607448 PLEKHH1Q9ULM0 1364 aa15.19■□□□□ 0.02
LINC01001-203ENST00000607448 CDC42BPGQ6DT37 1551 aa15.18■□□□□ 0.02
LINC01001-203ENST00000607448 YTHDC2Q9H6S0 1430 aaKnown RBP15.18■□□□□ 0.02
LINC01001-203ENST00000607448 CFAP70Q5T0N1 1121 aa15.18■□□□□ 0.02
LINC01001-203ENST00000607448 LRPPRCP42704 1394 aaKnown RBP15.18■□□□□ 0.02
LINC01001-203ENST00000607448 RGPD8O14715 1765 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms