RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 XIRP1Q702N8 1843 aaKnown RBP21.55■■□□□ 1.04
IRF3-224ENST00000599680 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
IRF3-224ENST00000599680 LRRC7Q96NW7 1537 aa21.55■■□□□ 1.04
IRF3-224ENST00000599680 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
IRF3-224ENST00000599680 TOM1O60784 492 aa21.54■■□□□ 1.04
IRF3-224ENST00000599680 ZFYVE9O95405 1425 aa21.54■■□□□ 1.04
IRF3-224ENST00000599680 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.52■■□□□ 1.04
IRF3-224ENST00000599680 SLC26A8Q96RN1 970 aa21.52■■□□□ 1.04
IRF3-224ENST00000599680 SENP3Q9H4L4 574 aaPredicted RBP21.51■■□□□ 1.03
IRF3-224ENST00000599680 CHD2O14647 1828 aaKnown RBP21.5■■□□□ 1.03
IRF3-224ENST00000599680 PLEKHG1Q9ULL1 1385 aa21.5■■□□□ 1.03
IRF3-224ENST00000599680 PIP4K2BP78356 416 aa21.5■■□□□ 1.03
IRF3-224ENST00000599680 CLTCL1P53675 1640 aa21.5■■□□□ 1.03
IRF3-224ENST00000599680 TRPM2O94759 1503 aa21.5■■□□□ 1.03
IRF3-224ENST00000599680 NWD1Q149M9 1564 aa21.47■■□□□ 1.03
IRF3-224ENST00000599680 DIP2AQ14689 1571 aa21.46■■□□□ 1.03
IRF3-224ENST00000599680 KCNA6P17658 529 aa21.45■■□□□ 1.02
IRF3-224ENST00000599680 ZNF326Q5BKZ1 582 aaKnown RBP21.45■■□□□ 1.02
IRF3-224ENST00000599680 NUTM2DQ5VT03 806 aaPredicted RBP21.45■■□□□ 1.02
IRF3-224ENST00000599680 SLC4A1APQ9BWU0 796 aaKnown RBP21.45■■□□□ 1.02
IRF3-224ENST00000599680 NKTRP30414 1462 aaKnown RBP21.44■■□□□ 1.02
IRF3-224ENST00000599680 PROSER2Q86WR7 435 aaPredicted RBP21.42■■□□□ 1.02
IRF3-224ENST00000599680 ALKQ9UM73 1620 aa21.42■■□□□ 1.02
IRF3-224ENST00000599680 TMEM94Q12767 1356 aa21.39■■□□□ 1.02
IRF3-224ENST00000599680 TBX22Q9Y458 520 aa21.38■■□□□ 1.01
IRF3-224ENST00000599680 NEXMIFQ5QGS0 1516 aa21.36■■□□□ 1.01
IRF3-224ENST00000599680 ADAMTS13Q76LX8 1427 aa21.36■■□□□ 1.01
IRF3-224ENST00000599680 NRXN3Q9Y4C0 1643 aa21.36■■□□□ 1.01
IRF3-224ENST00000599680 HSPA1LP34931 641 aa21.35■■□□□ 1.01
IRF3-224ENST00000599680 SETBP1Q9Y6X0 1596 aa21.35■■□□□ 1.01
IRF3-224ENST00000599680 DISP3Q9P2K9 1392 aa21.35■■□□□ 1.01
IRF3-224ENST00000599680 ACIN1Q9UKV3 1341 aaKnown RBP21.34■■□□□ 1.01
IRF3-224ENST00000599680 PPLO60437 1756 aa21.34■■□□□ 1.01
IRF3-224ENST00000599680 SETD5Q9C0A6 1442 aa21.34■■□□□ 1.01
IRF3-224ENST00000599680 PIK3R4Q99570 1358 aa21.34■■□□□ 1.01
IRF3-224ENST00000599680 RBM33Q96EV2 1170 aaKnown RBP21.33■■□□□ 1.01
IRF3-224ENST00000599680 MSH6P52701 1360 aa21.32■■□□□ 1
IRF3-224ENST00000599680 FOXD1Q16676 465 aa21.3■■□□□ 1
IRF3-224ENST00000599680 ROBO1Q9Y6N7 1651 aa21.29■■□□□ 1
IRF3-224ENST00000599680 C14orf37Q86TY3 774 aa21.29■■□□□ 1
IRF3-224ENST00000599680 MPHOSPH9Q99550 1183 aa21.29■■□□□ 1
IRF3-224ENST00000599680 XRN1Q8IZH2 1706 aaKnown RBP21.29■■□□□ 1
IRF3-224ENST00000599680 CCDC144AA2RUR9 1427 aa21.29■■□□□ 1
IRF3-224ENST00000599680 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.26■□□□□ 0.99
IRF3-224ENST00000599680 VGFO15240 615 aaPredicted RBP21.25■□□□□ 0.99
IRF3-224ENST00000599680 IFT172Q9UG01 1749 aa21.25■□□□□ 0.99
IRF3-224ENST00000599680 AMOTL2Q9Y2J4 779 aa21.25■□□□□ 0.99
IRF3-224ENST00000599680 NCOA3Q9Y6Q9 1424 aa21.25■□□□□ 0.99
IRF3-224ENST00000599680 RPGRIP1LQ68CZ1 1315 aa21.25■□□□□ 0.99
IRF3-224ENST00000599680 RAB3GAP2Q9H2M9 1393 aa21.24■□□□□ 0.99
IRF3-224ENST00000599680 SETD1AO15047 1707 aaKnown RBP21.24■□□□□ 0.99
IRF3-224ENST00000599680 PTPRUQ92729 1446 aa21.23■□□□□ 0.99
IRF3-224ENST00000599680 FAM135BQ49AJ0 1406 aa21.22■□□□□ 0.99
IRF3-224ENST00000599680 MED1Q15648 1581 aaPredicted RBP21.22■□□□□ 0.99
IRF3-224ENST00000599680 PHLPP1O60346 1717 aa21.21■□□□□ 0.99
IRF3-224ENST00000599680 METP08581 1390 aa21.2■□□□□ 0.98
IRF3-224ENST00000599680 ATF3P18847 181 aa21.18■□□□□ 0.98
IRF3-224ENST00000599680 RGL3Q3MIN7 710 aa21.18■□□□□ 0.98
IRF3-224ENST00000599680 SLAIN2Q9P270 581 aa21.18■□□□□ 0.98
IRF3-224ENST00000599680 C19orf44Q9H6X5 657 aa21.17■□□□□ 0.98
IRF3-224ENST00000599680 NALCNQ8IZF0 1738 aa21.16■□□□□ 0.98
IRF3-224ENST00000599680 SPATA31E1Q6ZUB1 1445 aa21.15■□□□□ 0.98
IRF3-224ENST00000599680 CADPS2Q86UW7 1296 aa21.15■□□□□ 0.98
IRF3-224ENST00000599680 DCCP43146 1447 aa21.12■□□□□ 0.97
IRF3-224ENST00000599680 ANKRD30BQ9BXX2 1392 aa21.12■□□□□ 0.97
IRF3-224ENST00000599680 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
IRF3-224ENST00000599680 PTCH1Q13635 1447 aa21.09■□□□□ 0.97
IRF3-224ENST00000599680 ADGRL3Q9HAR2 1447 aa21.09■□□□□ 0.97
IRF3-224ENST00000599680 ADGRF5Q8IZF2 1346 aa21.08■□□□□ 0.97
IRF3-224ENST00000599680 LAMC1P11047 1609 aa21.07■□□□□ 0.96
IRF3-224ENST00000599680 HRCP23327 699 aa21.07■□□□□ 0.96
IRF3-224ENST00000599680 ILDR2Q71H61 639 aa21.07■□□□□ 0.96
IRF3-224ENST00000599680 COL16A1Q07092 1604 aaPredicted RBP21.06■□□□□ 0.96
IRF3-224ENST00000599680 KNDC1Q76NI1 1749 aa21.06■□□□□ 0.96
IRF3-224ENST00000599680 AHDC1Q5TGY3 1603 aaPredicted RBP21.05■□□□□ 0.96
IRF3-224ENST00000599680 PIK3C2GO75747 1445 aa21.04■□□□□ 0.96
IRF3-224ENST00000599680 ROBO2Q9HCK4 1378 aa21.03■□□□□ 0.96
IRF3-224ENST00000599680 MST1RQ04912 1400 aa21.03■□□□□ 0.96
IRF3-224ENST00000599680 PRAG1Q86YV5 1406 aa21.03■□□□□ 0.96
IRF3-224ENST00000599680 MYOM2P54296 1465 aa21.02■□□□□ 0.96
IRF3-224ENST00000599680 NHSL1Q5SYE7 1610 aa21.02■□□□□ 0.96
IRF3-224ENST00000599680 ASXL1Q8IXJ9 1541 aa21.01■□□□□ 0.95
IRF3-224ENST00000599680 SHPRHQ149N8 1683 aa21■□□□□ 0.95
IRF3-224ENST00000599680 STK26Q9P289 416 aa21■□□□□ 0.95
IRF3-224ENST00000599680 JCADQ9P266 1359 aa20.99■□□□□ 0.95
IRF3-224ENST00000599680 BRINP3Q76B58 766 aa20.99■□□□□ 0.95
IRF3-224ENST00000599680 NRXN1Q9ULB1 1477 aa20.97■□□□□ 0.95
IRF3-224ENST00000599680 LRPPRCP42704 1394 aaKnown RBP20.97■□□□□ 0.95
IRF3-224ENST00000599680 TMEM132EQ6IEE7 984 aa20.96■□□□□ 0.95
IRF3-224ENST00000599680 CDC42BPGQ6DT37 1551 aa20.96■□□□□ 0.95
IRF3-224ENST00000599680 TECPR2O15040 1411 aa20.95■□□□□ 0.94
IRF3-224ENST00000599680 YTHDC2Q9H6S0 1430 aaKnown RBP20.95■□□□□ 0.94
IRF3-224ENST00000599680 C1orf167Q5SNV9 1468 aa20.94■□□□□ 0.94
IRF3-224ENST00000599680 SOCS7O14512 581 aa20.92■□□□□ 0.94
IRF3-224ENST00000599680 C14orf93Q9H972 538 aaKnown RBP20.92■□□□□ 0.94
IRF3-224ENST00000599680 DHX57Q6P158 1386 aaKnown RBP20.92■□□□□ 0.94
IRF3-224ENST00000599680 ABCC11Q96J66 1382 aa20.92■□□□□ 0.94
IRF3-224ENST00000599680 CFAP70Q5T0N1 1121 aa20.91■□□□□ 0.94
IRF3-224ENST00000599680 KDM2AQ9Y2K7 1162 aa20.91■□□□□ 0.94
IRF3-224ENST00000599680 FMN2Q9NZ56 1722 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms