RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 A2ML1A8K2U0 1454 aa31.52■■■□□ 2.64
LTBP4-224ENST00000599016 ZNF326Q5BKZ1 582 aaKnown RBP31.51■■■□□ 2.63
LTBP4-224ENST00000599016 UBR1Q8IWV7 1749 aa31.51■■■□□ 2.63
LTBP4-224ENST00000599016 ZNF142P52746 1687 aaPredicted RBP31.51■■■□□ 2.63
LTBP4-224ENST00000599016 CEP170BQ9Y4F5 1589 aaPredicted RBP31.49■■■□□ 2.63
LTBP4-224ENST00000599016 L3MBTL2Q969R5 705 aa31.47■■■□□ 2.63
LTBP4-224ENST00000599016 RPGRIP1LQ68CZ1 1315 aa31.45■■■□□ 2.62
LTBP4-224ENST00000599016 NCKAP5LQ9HCH0 1330 aa31.45■■■□□ 2.62
LTBP4-224ENST00000599016 ZNF335Q9H4Z2 1342 aaPredicted RBP31.43■■■□□ 2.62
LTBP4-224ENST00000599016 IFT172Q9UG01 1749 aa31.42■■■□□ 2.62
LTBP4-224ENST00000599016 THEMISQ8N1K5 641 aaPredicted RBP31.42■■■□□ 2.62
LTBP4-224ENST00000599016 DCAF11Q8TEB1 546 aa31.42■■■□□ 2.62
LTBP4-224ENST00000599016 PPLO60437 1756 aa31.42■■■□□ 2.62
LTBP4-224ENST00000599016 STAC3Q96MF2 364 aa31.4■■■□□ 2.62
LTBP4-224ENST00000599016 IQSEC2Q5JU85 1478 aa31.39■■■□□ 2.62
LTBP4-224ENST00000599016 KDM2AQ9Y2K7 1162 aa31.37■■■□□ 2.61
LTBP4-224ENST00000599016 NEXMIFQ5QGS0 1516 aa31.37■■■□□ 2.61
LTBP4-224ENST00000599016 UBAP1LF5GYI3 381 aa31.36■■■□□ 2.61
LTBP4-224ENST00000599016 HDGFP51858 240 aaKnown RBP31.36■■■□□ 2.61
LTBP4-224ENST00000599016 RIMS2Q9UQ26 1411 aa31.35■■■□□ 2.61
LTBP4-224ENST00000599016 TMEM2Q9UHN6 1383 aa31.34■■■□□ 2.61
LTBP4-224ENST00000599016 PPP1R15AO75807 674 aaPredicted RBP31.34■■■□□ 2.61
LTBP4-224ENST00000599016 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.33■■■□□ 2.619e-7■□□□□ 8
LTBP4-224ENST00000599016 MYOM2P54296 1465 aa31.33■■■□□ 2.61
LTBP4-224ENST00000599016 VGFO15240 615 aaPredicted RBP31.32■■■□□ 2.6
LTBP4-224ENST00000599016 SLIT1O75093 1534 aa31.32■■■□□ 2.6
LTBP4-224ENST00000599016 ZFYVE9O95405 1425 aa31.3■■■□□ 2.6
LTBP4-224ENST00000599016 ARHGAP23Q9P227 1491 aa31.29■■■□□ 2.6
LTBP4-224ENST00000599016 EID1Q9Y6B2 187 aa31.28■■■□□ 2.6
LTBP4-224ENST00000599016 NUTM2DQ5VT03 806 aaPredicted RBP31.26■■■□□ 2.59
LTBP4-224ENST00000599016 TXNDC2Q86VQ3 553 aa31.23■■■□□ 2.59
LTBP4-224ENST00000599016 PRAG1Q86YV5 1406 aa31.23■■■□□ 2.59
LTBP4-224ENST00000599016 ADGRF5Q8IZF2 1346 aa31.23■■■□□ 2.59
LTBP4-224ENST00000599016 NRXN1Q9ULB1 1477 aa31.21■■■□□ 2.59
LTBP4-224ENST00000599016 ANKLE2Q86XL3 938 aa31.2■■■□□ 2.59
LTBP4-224ENST00000599016 SCAF11Q99590 1463 aaKnown RBP31.2■■■□□ 2.58
LTBP4-224ENST00000599016 LTKP29376 864 aa31.18■■■□□ 2.58
LTBP4-224ENST00000599016 NBPF8Q3BBV2 869 aa31.18■■■□□ 2.58
LTBP4-224ENST00000599016 POLR1AO95602 1720 aaPredicted RBP31.18■■■□□ 2.58
LTBP4-224ENST00000599016 PIK3C2GO75747 1445 aa31.16■■■□□ 2.58
LTBP4-224ENST00000599016 KIAA1210Q9ULL0 1709 aa31.15■■■□□ 2.58
LTBP4-224ENST00000599016 HSPA1LP34931 641 aa31.15■■■□□ 2.58
LTBP4-224ENST00000599016 TRPM1Q7Z4N2 1603 aa31.14■■■□□ 2.58
LTBP4-224ENST00000599016 PLEKHG1Q9ULL1 1385 aa31.14■■■□□ 2.58
LTBP4-224ENST00000599016 BCANQ96GW7 911 aa31.13■■■□□ 2.57
LTBP4-224ENST00000599016 LAMC1P11047 1609 aa31.13■■■□□ 2.57
LTBP4-224ENST00000599016 SETBP1Q9Y6X0 1596 aa31.1■■■□□ 2.57
LTBP4-224ENST00000599016 RALGAPBQ86X10 1494 aa31.1■■■□□ 2.57
LTBP4-224ENST00000599016 PIP4K2BP78356 416 aa31.09■■■□□ 2.57
LTBP4-224ENST00000599016 IQGAP1P46940 1657 aa31.09■■■□□ 2.57
LTBP4-224ENST00000599016 SCAF1Q9H7N4 1312 aaKnown RBP31.07■■■□□ 2.56
LTBP4-224ENST00000599016 CFAP70Q5T0N1 1121 aa31.07■■■□□ 2.56
LTBP4-224ENST00000599016 SENP3Q9H4L4 574 aaPredicted RBP31.07■■■□□ 2.56
LTBP4-224ENST00000599016 C14orf93Q9H972 538 aaKnown RBP31.07■■■□□ 2.56
LTBP4-224ENST00000599016 NRXN3Q9Y4C0 1643 aa31.06■■■□□ 2.56
LTBP4-224ENST00000599016 ALKQ9UM73 1620 aa31.06■■■□□ 2.56
LTBP4-224ENST00000599016 ROCK2O75116 1388 aaKnown RBP31.05■■■□□ 2.56
LTBP4-224ENST00000599016 MED14O60244 1454 aa31.04■■■□□ 2.56
LTBP4-224ENST00000599016 NPHP4O75161 1426 aaPredicted RBP31.03■■■□□ 2.56
LTBP4-224ENST00000599016 DIP2AQ14689 1571 aa31.02■■■□□ 2.56
LTBP4-224ENST00000599016 SETD1AO15047 1707 aaKnown RBP31■■■□□ 2.55
LTBP4-224ENST00000599016 NBPF1Q3BBV0 1214 aa30.99■■■□□ 2.55
LTBP4-224ENST00000599016 MED1Q15648 1581 aaPredicted RBP30.99■■■□□ 2.55
LTBP4-224ENST00000599016 ADAMTS13Q76LX8 1427 aa30.98■■■□□ 2.55
LTBP4-224ENST00000599016 CARD11Q9BXL7 1154 aa30.98■■■□□ 2.55
LTBP4-224ENST00000599016 GPRASP1Q5JY77 1395 aa30.97■■■□□ 2.55
LTBP4-224ENST00000599016 TBX22Q9Y458 520 aa30.96■■■□□ 2.55
LTBP4-224ENST00000599016 SLC26A8Q96RN1 970 aa30.95■■■□□ 2.55
LTBP4-224ENST00000599016 ADGRB1O14514 1584 aa30.93■■■□□ 2.54
LTBP4-224ENST00000599016 TMEM132EQ6IEE7 984 aa30.92■■■□□ 2.54
LTBP4-224ENST00000599016 TOM1O60784 492 aa30.91■■■□□ 2.54
LTBP4-224ENST00000599016 ASXL1Q8IXJ9 1541 aa30.91■■■□□ 2.54
LTBP4-224ENST00000599016 METP08581 1390 aa30.88■■■□□ 2.53
LTBP4-224ENST00000599016 PIK3R4Q99570 1358 aa30.88■■■□□ 2.53
LTBP4-224ENST00000599016 YTHDC2Q9H6S0 1430 aaKnown RBP30.86■■■□□ 2.53
LTBP4-224ENST00000599016 LRPPRCP42704 1394 aaKnown RBP30.84■■■□□ 2.53
LTBP4-224ENST00000599016 EIF4G2P78344 907 aaKnown RBP eCLIP30.84■■■□□ 2.531e-6■■■■□ 19.5
LTBP4-224ENST00000599016 USP47Q96K76 1375 aa30.83■■■□□ 2.53
LTBP4-224ENST00000599016 CHD2O14647 1828 aaKnown RBP30.82■■■□□ 2.52
LTBP4-224ENST00000599016 EIF3AQ14152 1382 aaKnown RBP30.82■■■□□ 2.52
LTBP4-224ENST00000599016 STK26Q9P289 416 aa30.82■■■□□ 2.52
LTBP4-224ENST00000599016 CPS1P31327 1500 aa30.82■■■□□ 2.52
LTBP4-224ENST00000599016 KNDC1Q76NI1 1749 aa30.81■■■□□ 2.52
LTBP4-224ENST00000599016 TRAK1Q9UPV9 953 aa30.8■■■□□ 2.52
LTBP4-224ENST00000599016 ABCC11Q96J66 1382 aa30.79■■■□□ 2.52
LTBP4-224ENST00000599016 PHF23Q9BUL5 403 aaPredicted RBP30.78■■■□□ 2.52
LTBP4-224ENST00000599016 ARHGEF28Q8N1W1 1705 aaKnown RBP30.78■■■□□ 2.52
LTBP4-224ENST00000599016 PTPRUQ92729 1446 aa30.77■■■□□ 2.52
LTBP4-224ENST00000599016 DLC1Q96QB1 1528 aa30.77■■■□□ 2.52
LTBP4-224ENST00000599016 HSPA5P11021 654 aaKnown RBP30.76■■■□□ 2.51
LTBP4-224ENST00000599016 AMOTL2Q9Y2J4 779 aa30.76■■■□□ 2.51
LTBP4-224ENST00000599016 XRN1Q8IZH2 1706 aaKnown RBP30.75■■■□□ 2.51
LTBP4-224ENST00000599016 TECPR2O15040 1411 aa30.74■■■□□ 2.51
LTBP4-224ENST00000599016 KCNA6P17658 529 aa30.72■■■□□ 2.51
LTBP4-224ENST00000599016 NWD1Q149M9 1564 aa30.71■■■□□ 2.51
LTBP4-224ENST00000599016 SIRT1Q96EB6 747 aa30.71■■■□□ 2.51
LTBP4-224ENST00000599016 ST20-MTHFSA0A0A6YYL1 179 aa30.7■■■□□ 2.51
LTBP4-224ENST00000599016 POGKQ9P215 609 aa30.7■■■□□ 2.51
LTBP4-224ENST00000599016 CENPJQ9HC77 1338 aaPredicted RBP30.7■■■□□ 2.5
LTBP4-224ENST00000599016 PTCH1Q13635 1447 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms