RNA–Protein interactions for RNA: ENST00000597936.5

SNRNP70-205, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-205ENST00000597936 PLEKHG1Q9ULL1 1385 aa28.31■■■□□ 2.12
SNRNP70-205ENST00000597936 XIRP1Q702N8 1843 aaKnown RBP28.3■■■□□ 2.12
SNRNP70-205ENST00000597936 CHGAP10645 457 aaKnown RBP28.3■■■□□ 2.12
SNRNP70-205ENST00000597936 TRIM52Q96A61 297 aa28.3■■■□□ 2.12
SNRNP70-205ENST00000597936 ALKQ9UM73 1620 aa28.29■■■□□ 2.12
SNRNP70-205ENST00000597936 NWD1Q149M9 1564 aa28.28■■■□□ 2.12
SNRNP70-205ENST00000597936 SLC26A8Q96RN1 970 aa28.27■■■□□ 2.12
SNRNP70-205ENST00000597936 HDGFP51858 240 aaKnown RBP28.24■■■□□ 2.11
SNRNP70-205ENST00000597936 KIF1BO60333 1816 aa28.23■■■□□ 2.11
SNRNP70-205ENST00000597936 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.23■■■□□ 2.11
SNRNP70-205ENST00000597936 SLC4A1APQ9BWU0 796 aaKnown RBP28.23■■■□□ 2.11
SNRNP70-205ENST00000597936 ADAMTS13Q76LX8 1427 aa28.22■■■□□ 2.11
SNRNP70-205ENST00000597936 CHD2O14647 1828 aaKnown RBP28.22■■■□□ 2.11
SNRNP70-205ENST00000597936 PPP1R15AO75807 674 aaPredicted RBP28.21■■■□□ 2.11
SNRNP70-205ENST00000597936 NUTM2DQ5VT03 806 aaPredicted RBP28.21■■■□□ 2.11
SNRNP70-205ENST00000597936 DIP2AQ14689 1571 aa28.2■■■□□ 2.1
SNRNP70-205ENST00000597936 SETD5Q9C0A6 1442 aa28.19■■■□□ 2.1
SNRNP70-205ENST00000597936 NEXMIFQ5QGS0 1516 aa28.19■■■□□ 2.1
SNRNP70-205ENST00000597936 NRXN3Q9Y4C0 1643 aa28.19■■■□□ 2.1
SNRNP70-205ENST00000597936 KCNA6P17658 529 aa28.19■■■□□ 2.1
SNRNP70-205ENST00000597936 SENP3Q9H4L4 574 aaPredicted RBP28.19■■■□□ 2.1
SNRNP70-205ENST00000597936 PIP4K2BP78356 416 aa28.18■■■□□ 2.1
SNRNP70-205ENST00000597936 SCAF1Q9H7N4 1312 aaKnown RBP28.18■■■□□ 2.1
SNRNP70-205ENST00000597936 NKTRP30414 1462 aaKnown RBP28.17■■■□□ 2.1
SNRNP70-205ENST00000597936 BCANQ96GW7 911 aa28.15■■■□□ 2.1
SNRNP70-205ENST00000597936 SETBP1Q9Y6X0 1596 aa28.15■■■□□ 2.1
SNRNP70-205ENST00000597936 FOXD1Q16676 465 aa28.14■■■□□ 2.1
SNRNP70-205ENST00000597936 TBX22Q9Y458 520 aa28.14■■■□□ 2.1
SNRNP70-205ENST00000597936 DISP3Q9P2K9 1392 aa28.13■■■□□ 2.09
SNRNP70-205ENST00000597936 MPHOSPH9Q99550 1183 aa28.12■■■□□ 2.09
SNRNP70-205ENST00000597936 TMEM94Q12767 1356 aa28.11■■■□□ 2.09
SNRNP70-205ENST00000597936 RAB3GAP2Q9H2M9 1393 aa28.11■■■□□ 2.09
SNRNP70-205ENST00000597936 HSPA1LP34931 641 aa28.11■■■□□ 2.09
SNRNP70-205ENST00000597936 ZNF326Q5BKZ1 582 aaKnown RBP28.1■■■□□ 2.09
SNRNP70-205ENST00000597936 PIK3R4Q99570 1358 aa28.07■■■□□ 2.08
SNRNP70-205ENST00000597936 PPLO60437 1756 aa28.06■■■□□ 2.08
SNRNP70-205ENST00000597936 PTPRUQ92729 1446 aa28.06■■■□□ 2.08
SNRNP70-205ENST00000597936 ACIN1Q9UKV3 1341 aaKnown RBP28.05■■■□□ 2.08
SNRNP70-205ENST00000597936 PROSER2Q86WR7 435 aaPredicted RBP28.04■■■□□ 2.08
SNRNP70-205ENST00000597936 RBM33Q96EV2 1170 aaKnown RBP28.04■■■□□ 2.08
SNRNP70-205ENST00000597936 XRN1Q8IZH2 1706 aaKnown RBP28.04■■■□□ 2.08
SNRNP70-205ENST00000597936 SETD1AO15047 1707 aaKnown RBP28.02■■■□□ 2.08
SNRNP70-205ENST00000597936 CCDC144AA2RUR9 1427 aa28.01■■■□□ 2.08
SNRNP70-205ENST00000597936 SPATA31E1Q6ZUB1 1445 aa28■■■□□ 2.07
SNRNP70-205ENST00000597936 IFT172Q9UG01 1749 aa27.99■■■□□ 2.07
SNRNP70-205ENST00000597936 FAM135BQ49AJ0 1406 aa27.98■■■□□ 2.07
SNRNP70-205ENST00000597936 NCOA3Q9Y6Q9 1424 aa27.98■■■□□ 2.07
SNRNP70-205ENST00000597936 METP08581 1390 aa27.98■■■□□ 2.07
SNRNP70-205ENST00000597936 RPGRIP1LQ68CZ1 1315 aa27.97■■■□□ 2.07
SNRNP70-205ENST00000597936 MSH6P52701 1360 aa27.96■■■□□ 2.07
SNRNP70-205ENST00000597936 AMOTL2Q9Y2J4 779 aa27.94■■■□□ 2.06
SNRNP70-205ENST00000597936 MED1Q15648 1581 aaPredicted RBP27.93■■■□□ 2.06
SNRNP70-205ENST00000597936 VGFO15240 615 aaPredicted RBP27.92■■■□□ 2.06
SNRNP70-205ENST00000597936 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.9■■■□□ 2.06
SNRNP70-205ENST00000597936 HRCP23327 699 aa27.9■■■□□ 2.06
SNRNP70-205ENST00000597936 ROBO1Q9Y6N7 1651 aa27.9■■■□□ 2.06
SNRNP70-205ENST00000597936 ILDR2Q71H61 639 aa27.89■■■□□ 2.06
SNRNP70-205ENST00000597936 RGL3Q3MIN7 710 aa27.85■■■□□ 2.05
SNRNP70-205ENST00000597936 ADGRF5Q8IZF2 1346 aa27.84■■■□□ 2.05
SNRNP70-205ENST00000597936 ANKRD30BQ9BXX2 1392 aa27.84■■■□□ 2.05
SNRNP70-205ENST00000597936 PRAG1Q86YV5 1406 aa27.84■■■□□ 2.05
SNRNP70-205ENST00000597936 SLAIN2Q9P270 581 aa27.83■■■□□ 2.05
SNRNP70-205ENST00000597936 NALCNQ8IZF0 1738 aa27.81■■■□□ 2.04
SNRNP70-205ENST00000597936 C19orf44Q9H6X5 657 aa27.8■■■□□ 2.04
SNRNP70-205ENST00000597936 PIK3C2GO75747 1445 aa27.79■■■□□ 2.04
SNRNP70-205ENST00000597936 PTCH1Q13635 1447 aa27.79■■■□□ 2.04
SNRNP70-205ENST00000597936 C14orf37Q86TY3 774 aa27.79■■■□□ 2.04
SNRNP70-205ENST00000597936 ASXL1Q8IXJ9 1541 aa27.78■■■□□ 2.04
SNRNP70-205ENST00000597936 DCCP43146 1447 aa27.78■■■□□ 2.04
SNRNP70-205ENST00000597936 CADPS2Q86UW7 1296 aa27.78■■■□□ 2.04
SNRNP70-205ENST00000597936 NRXN1Q9ULB1 1477 aa27.76■■■□□ 2.04
SNRNP70-205ENST00000597936 MYOM2P54296 1465 aa27.76■■■□□ 2.03
SNRNP70-205ENST00000597936 ADGRL3Q9HAR2 1447 aa27.75■■■□□ 2.03
SNRNP70-205ENST00000597936 ROBO2Q9HCK4 1378 aa27.74■■■□□ 2.03
SNRNP70-205ENST00000597936 SOCS7O14512 581 aa27.74■■■□□ 2.03
SNRNP70-205ENST00000597936 ATF3P18847 181 aa27.74■■■□□ 2.03
SNRNP70-205ENST00000597936 PHLPP1O60346 1717 aa27.72■■■□□ 2.03
SNRNP70-205ENST00000597936 KNDC1Q76NI1 1749 aa27.7■■■□□ 2.03
SNRNP70-205ENST00000597936 MST1RQ04912 1400 aa27.69■■■□□ 2.02
SNRNP70-205ENST00000597936 TECPR2O15040 1411 aa27.68■■■□□ 2.02
SNRNP70-205ENST00000597936 COL16A1Q07092 1604 aaPredicted RBP27.68■■■□□ 2.02
SNRNP70-205ENST00000597936 PHF23Q9BUL5 403 aaPredicted RBP27.68■■■□□ 2.02
SNRNP70-205ENST00000597936 LAMC1P11047 1609 aa27.67■■■□□ 2.02
SNRNP70-205ENST00000597936 AHDC1Q5TGY3 1603 aaPredicted RBP27.67■■■□□ 2.02
SNRNP70-205ENST00000597936 LRPPRCP42704 1394 aaKnown RBP27.64■■■□□ 2.02
SNRNP70-205ENST00000597936 C14orf93Q9H972 538 aaKnown RBP27.62■■■□□ 2.01
SNRNP70-205ENST00000597936 ABCC11Q96J66 1382 aa27.61■■■□□ 2.01
SNRNP70-205ENST00000597936 JCADQ9P266 1359 aa27.61■■■□□ 2.01
SNRNP70-205ENST00000597936 TMEM132EQ6IEE7 984 aa27.61■■■□□ 2.01
SNRNP70-205ENST00000597936 BRINP3Q76B58 766 aa27.61■■■□□ 2.01
SNRNP70-205ENST00000597936 NHSL1Q5SYE7 1610 aa27.6■■■□□ 2.01
SNRNP70-205ENST00000597936 YTHDC2Q9H6S0 1430 aaKnown RBP27.6■■■□□ 2.01
SNRNP70-205ENST00000597936 DHX57Q6P158 1386 aaKnown RBP27.59■■■□□ 2.01
SNRNP70-205ENST00000597936 CDC42BPGQ6DT37 1551 aa27.58■■■□□ 2.01
SNRNP70-205ENST00000597936 CFAP70Q5T0N1 1121 aa27.58■■■□□ 2.01
SNRNP70-205ENST00000597936 ADGRB1O14514 1584 aa27.56■■■□□ 2
SNRNP70-205ENST00000597936 STK26Q9P289 416 aa27.56■■■□□ 2
SNRNP70-205ENST00000597936 C1orf167Q5SNV9 1468 aa27.56■■■□□ 2
SNRNP70-205ENST00000597936 PLEKHH1Q9ULM0 1364 aa27.55■■■□□ 2
SNRNP70-205ENST00000597936 SHPRHQ149N8 1683 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms