RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 NWD1Q149M9 1564 aa17.7■□□□□ 0.42
SYMPK-207ENST00000596824 TRPM2O94759 1503 aa17.67■□□□□ 0.42
SYMPK-207ENST00000596824 RIMS2Q9UQ26 1411 aa17.67■□□□□ 0.42
SYMPK-207ENST00000596824 UBAP1LF5GYI3 381 aa17.67■□□□□ 0.42
SYMPK-207ENST00000596824 DIP2AQ14689 1571 aa17.64■□□□□ 0.41
SYMPK-207ENST00000596824 PLEKHG1Q9ULL1 1385 aa17.64■□□□□ 0.41
SYMPK-207ENST00000596824 NRXN3Q9Y4C0 1643 aa17.63■□□□□ 0.41
SYMPK-207ENST00000596824 NKTRP30414 1462 aaKnown RBP17.61■□□□□ 0.41
SYMPK-207ENST00000596824 CHGAP10645 457 aaKnown RBP17.6■□□□□ 0.41
SYMPK-207ENST00000596824 SLC26A8Q96RN1 970 aa17.6■□□□□ 0.41
SYMPK-207ENST00000596824 PPLO60437 1756 aa17.59■□□□□ 0.41
SYMPK-207ENST00000596824 NEXMIFQ5QGS0 1516 aa17.59■□□□□ 0.41
SYMPK-207ENST00000596824 TOM1O60784 492 aa17.58■□□□□ 0.4
SYMPK-207ENST00000596824 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
SYMPK-207ENST00000596824 ADAMTS13Q76LX8 1427 aa17.57■□□□□ 0.4
SYMPK-207ENST00000596824 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
SYMPK-207ENST00000596824 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
SYMPK-207ENST00000596824 KCNA6P17658 529 aa17.56■□□□□ 0.4
SYMPK-207ENST00000596824 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.56■□□□□ 0.4
SYMPK-207ENST00000596824 TRIM52Q96A61 297 aa17.56■□□□□ 0.4
SYMPK-207ENST00000596824 SETD1AO15047 1707 aaKnown RBP17.55■□□□□ 0.4
SYMPK-207ENST00000596824 XRN1Q8IZH2 1706 aaKnown RBP17.55■□□□□ 0.4
SYMPK-207ENST00000596824 IFT172Q9UG01 1749 aa17.55■□□□□ 0.4
SYMPK-207ENST00000596824 PIP4K2BP78356 416 aa17.54■□□□□ 0.4
SYMPK-207ENST00000596824 NUTM2DQ5VT03 806 aaPredicted RBP17.54■□□□□ 0.4
SYMPK-207ENST00000596824 BCANQ96GW7 911 aa17.54■□□□□ 0.4
SYMPK-207ENST00000596824 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
SYMPK-207ENST00000596824 TMEM94Q12767 1356 aa17.53■□□□□ 0.4
SYMPK-207ENST00000596824 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
SYMPK-207ENST00000596824 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.39
SYMPK-207ENST00000596824 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
SYMPK-207ENST00000596824 TBX22Q9Y458 520 aa17.51■□□□□ 0.39
SYMPK-207ENST00000596824 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.5■□□□□ 0.39
SYMPK-207ENST00000596824 PIK3R4Q99570 1358 aa17.5■□□□□ 0.39
SYMPK-207ENST00000596824 HSPA1LP34931 641 aa17.48■□□□□ 0.39
SYMPK-207ENST00000596824 ZNF326Q5BKZ1 582 aaKnown RBP17.48■□□□□ 0.39
SYMPK-207ENST00000596824 PROSER2Q86WR7 435 aaPredicted RBP17.48■□□□□ 0.39
SYMPK-207ENST00000596824 PTPRUQ92729 1446 aa17.47■□□□□ 0.39
SYMPK-207ENST00000596824 SETD5Q9C0A6 1442 aa17.47■□□□□ 0.39
SYMPK-207ENST00000596824 MED1Q15648 1581 aaPredicted RBP17.45■□□□□ 0.38
SYMPK-207ENST00000596824 RBM33Q96EV2 1170 aaKnown RBP17.45■□□□□ 0.38
SYMPK-207ENST00000596824 NALCNQ8IZF0 1738 aa17.44■□□□□ 0.38
SYMPK-207ENST00000596824 MSH6P52701 1360 aa17.43■□□□□ 0.38
SYMPK-207ENST00000596824 DISP3Q9P2K9 1392 aa17.43■□□□□ 0.38
SYMPK-207ENST00000596824 FOXD1Q16676 465 aa17.43■□□□□ 0.38
SYMPK-207ENST00000596824 MPHOSPH9Q99550 1183 aa17.43■□□□□ 0.38
SYMPK-207ENST00000596824 NCOA3Q9Y6Q9 1424 aa17.43■□□□□ 0.38
SYMPK-207ENST00000596824 PHLPP1O60346 1717 aa17.43■□□□□ 0.38
SYMPK-207ENST00000596824 RAB3GAP2Q9H2M9 1393 aa17.41■□□□□ 0.38
SYMPK-207ENST00000596824 CCDC144AA2RUR9 1427 aa17.41■□□□□ 0.38
SYMPK-207ENST00000596824 FAM135BQ49AJ0 1406 aa17.41■□□□□ 0.38
SYMPK-207ENST00000596824 ACIN1Q9UKV3 1341 aaKnown RBP17.41■□□□□ 0.38
SYMPK-207ENST00000596824 METP08581 1390 aa17.4■□□□□ 0.38
SYMPK-207ENST00000596824 SPATA31E1Q6ZUB1 1445 aa17.39■□□□□ 0.38
SYMPK-207ENST00000596824 AMOTL2Q9Y2J4 779 aa17.38■□□□□ 0.37
SYMPK-207ENST00000596824 RPGRIP1LQ68CZ1 1315 aa17.38■□□□□ 0.37
SYMPK-207ENST00000596824 KNDC1Q76NI1 1749 aa17.36■□□□□ 0.37
SYMPK-207ENST00000596824 VGFO15240 615 aaPredicted RBP17.35■□□□□ 0.37
SYMPK-207ENST00000596824 COL16A1Q07092 1604 aaPredicted RBP17.35■□□□□ 0.37
SYMPK-207ENST00000596824 LAMC1P11047 1609 aa17.33■□□□□ 0.37
SYMPK-207ENST00000596824 DCCP43146 1447 aa17.33■□□□□ 0.36
SYMPK-207ENST00000596824 PRAG1Q86YV5 1406 aa17.33■□□□□ 0.36
SYMPK-207ENST00000596824 NHSL1Q5SYE7 1610 aa17.32■□□□□ 0.36
SYMPK-207ENST00000596824 AHDC1Q5TGY3 1603 aaPredicted RBP17.32■□□□□ 0.36
SYMPK-207ENST00000596824 PTCH1Q13635 1447 aa17.32■□□□□ 0.36
SYMPK-207ENST00000596824 C14orf37Q86TY3 774 aa17.32■□□□□ 0.36
SYMPK-207ENST00000596824 SLAIN2Q9P270 581 aa17.32■□□□□ 0.36
SYMPK-207ENST00000596824 C19orf44Q9H6X5 657 aa17.31■□□□□ 0.36
SYMPK-207ENST00000596824 ASXL1Q8IXJ9 1541 aa17.31■□□□□ 0.36
SYMPK-207ENST00000596824 ADGRL3Q9HAR2 1447 aa17.3■□□□□ 0.36
SYMPK-207ENST00000596824 SHPRHQ149N8 1683 aa17.29■□□□□ 0.36
SYMPK-207ENST00000596824 ANKRD30BQ9BXX2 1392 aa17.29■□□□□ 0.36
SYMPK-207ENST00000596824 ILDR2Q71H61 639 aa17.29■□□□□ 0.36
SYMPK-207ENST00000596824 PIK3C2GO75747 1445 aa17.29■□□□□ 0.36
SYMPK-207ENST00000596824 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
SYMPK-207ENST00000596824 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
SYMPK-207ENST00000596824 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
SYMPK-207ENST00000596824 MYOM2P54296 1465 aa17.28■□□□□ 0.36
SYMPK-207ENST00000596824 NRXN1Q9ULB1 1477 aa17.27■□□□□ 0.36
SYMPK-207ENST00000596824 ATF3P18847 181 aa17.27■□□□□ 0.36
SYMPK-207ENST00000596824 MST1RQ04912 1400 aa17.27■□□□□ 0.35
SYMPK-207ENST00000596824 ROBO2Q9HCK4 1378 aa17.26■□□□□ 0.35
SYMPK-207ENST00000596824 HRCP23327 699 aa17.25■□□□□ 0.35
SYMPK-207ENST00000596824 CDC42BPGQ6DT37 1551 aa17.24■□□□□ 0.35
SYMPK-207ENST00000596824 TECPR2O15040 1411 aa17.22■□□□□ 0.35
SYMPK-207ENST00000596824 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
SYMPK-207ENST00000596824 FMN2Q9NZ56 1722 aa17.21■□□□□ 0.35
SYMPK-207ENST00000596824 BRINP3Q76B58 766 aa17.2■□□□□ 0.34
SYMPK-207ENST00000596824 LRPPRCP42704 1394 aaKnown RBP17.19■□□□□ 0.34
SYMPK-207ENST00000596824 JCADQ9P266 1359 aa17.19■□□□□ 0.34
SYMPK-207ENST00000596824 YTHDC2Q9H6S0 1430 aaKnown RBP17.18■□□□□ 0.34
SYMPK-207ENST00000596824 C1orf167Q5SNV9 1468 aa17.18■□□□□ 0.34
SYMPK-207ENST00000596824 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
SYMPK-207ENST00000596824 ABCC11Q96J66 1382 aa17.15■□□□□ 0.34
SYMPK-207ENST00000596824 ADGRB1O14514 1584 aa17.15■□□□□ 0.34
SYMPK-207ENST00000596824 TMEM132EQ6IEE7 984 aa17.15■□□□□ 0.34
SYMPK-207ENST00000596824 C14orf93Q9H972 538 aaKnown RBP17.15■□□□□ 0.34
SYMPK-207ENST00000596824 LRP6O75581 1613 aa17.14■□□□□ 0.33
SYMPK-207ENST00000596824 ARHGEF28Q8N1W1 1705 aaKnown RBP17.14■□□□□ 0.33
SYMPK-207ENST00000596824 KIAA1210Q9ULL0 1709 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms