RNA–Protein interactions for RNA: ENST00000595700.5

SMG9-203, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-203ENST00000595700 ALKQ9UM73 1620 aa22.27■■□□□ 1.16
SMG9-203ENST00000595700 CLTCL1P53675 1640 aa22.26■■□□□ 1.15
SMG9-203ENST00000595700 SLC26A8Q96RN1 970 aa22.26■■□□□ 1.15
SMG9-203ENST00000595700 NWD1Q149M9 1564 aa22.24■■□□□ 1.15
SMG9-203ENST00000595700 PLEKHG1Q9ULL1 1385 aa22.24■■□□□ 1.15
SMG9-203ENST00000595700 PPP1R15AO75807 674 aaPredicted RBP22.24■■□□□ 1.15
SMG9-203ENST00000595700 TRIM52Q96A61 297 aa22.24■■□□□ 1.15
SMG9-203ENST00000595700 BCANQ96GW7 911 aa22.24■■□□□ 1.15
SMG9-203ENST00000595700 TRPM2O94759 1503 aa22.24■■□□□ 1.15
SMG9-203ENST00000595700 SCAF1Q9H7N4 1312 aaKnown RBP22.24■■□□□ 1.15
SMG9-203ENST00000595700 TOM1O60784 492 aa22.23■■□□□ 1.15
SMG9-203ENST00000595700 PIP4K2BP78356 416 aa22.22■■□□□ 1.15
SMG9-203ENST00000595700 NUTM2DQ5VT03 806 aaPredicted RBP22.22■■□□□ 1.15
SMG9-203ENST00000595700 KIF1BO60333 1816 aa22.21■■□□□ 1.15
SMG9-203ENST00000595700 CHD2O14647 1828 aaKnown RBP22.2■■□□□ 1.14
SMG9-203ENST00000595700 HDGFP51858 240 aaKnown RBP22.2■■□□□ 1.14
SMG9-203ENST00000595700 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.19■■□□□ 1.14
SMG9-203ENST00000595700 NKTRP30414 1462 aaKnown RBP22.17■■□□□ 1.14
SMG9-203ENST00000595700 KCNA6P17658 529 aa22.17■■□□□ 1.14
SMG9-203ENST00000595700 DIP2AQ14689 1571 aa22.17■■□□□ 1.14
SMG9-203ENST00000595700 SLC4A1APQ9BWU0 796 aaKnown RBP22.15■■□□□ 1.14
SMG9-203ENST00000595700 ADAMTS13Q76LX8 1427 aa22.15■■□□□ 1.14
SMG9-203ENST00000595700 TMEM94Q12767 1356 aa22.14■■□□□ 1.14
SMG9-203ENST00000595700 NRXN3Q9Y4C0 1643 aa22.14■■□□□ 1.14
SMG9-203ENST00000595700 ZNF326Q5BKZ1 582 aaKnown RBP22.14■■□□□ 1.13
SMG9-203ENST00000595700 NEXMIFQ5QGS0 1516 aa22.13■■□□□ 1.13
SMG9-203ENST00000595700 HSPA1LP34931 641 aa22.11■■□□□ 1.13
SMG9-203ENST00000595700 PROSER2Q86WR7 435 aaPredicted RBP22.11■■□□□ 1.13
SMG9-203ENST00000595700 RBM33Q96EV2 1170 aaKnown RBP22.11■■□□□ 1.13
SMG9-203ENST00000595700 TBX22Q9Y458 520 aa22.1■■□□□ 1.13
SMG9-203ENST00000595700 SETBP1Q9Y6X0 1596 aa22.1■■□□□ 1.13
SMG9-203ENST00000595700 FOXD1Q16676 465 aa22.07■■□□□ 1.12
SMG9-203ENST00000595700 DISP3Q9P2K9 1392 aa22.06■■□□□ 1.12
SMG9-203ENST00000595700 SETD5Q9C0A6 1442 aa22.06■■□□□ 1.12
SMG9-203ENST00000595700 PPLO60437 1756 aa22.04■■□□□ 1.12
SMG9-203ENST00000595700 PIK3R4Q99570 1358 aa22.04■■□□□ 1.12
SMG9-203ENST00000595700 PTPRUQ92729 1446 aa22.04■■□□□ 1.12
SMG9-203ENST00000595700 XRN1Q8IZH2 1706 aaKnown RBP22.04■■□□□ 1.12
SMG9-203ENST00000595700 MPHOSPH9Q99550 1183 aa22.02■■□□□ 1.12
SMG9-203ENST00000595700 MSH6P52701 1360 aa22.02■■□□□ 1.12
SMG9-203ENST00000595700 ROBO1Q9Y6N7 1651 aa22.02■■□□□ 1.12
SMG9-203ENST00000595700 SETD1AO15047 1707 aaKnown RBP22■■□□□ 1.11
SMG9-203ENST00000595700 CCDC144AA2RUR9 1427 aa21.99■■□□□ 1.11
SMG9-203ENST00000595700 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
SMG9-203ENST00000595700 MED1Q15648 1581 aaPredicted RBP21.98■■□□□ 1.11
SMG9-203ENST00000595700 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.98■■□□□ 1.11
SMG9-203ENST00000595700 AMOTL2Q9Y2J4 779 aa21.97■■□□□ 1.11
SMG9-203ENST00000595700 IFT172Q9UG01 1749 aa21.97■■□□□ 1.11
SMG9-203ENST00000595700 METP08581 1390 aa21.96■■□□□ 1.11
SMG9-203ENST00000595700 FAM135BQ49AJ0 1406 aa21.96■■□□□ 1.11
SMG9-203ENST00000595700 NCOA3Q9Y6Q9 1424 aa21.95■■□□□ 1.1
SMG9-203ENST00000595700 C14orf37Q86TY3 774 aa21.95■■□□□ 1.1
SMG9-203ENST00000595700 RPGRIP1LQ68CZ1 1315 aa21.94■■□□□ 1.1
SMG9-203ENST00000595700 ACIN1Q9UKV3 1341 aaKnown RBP21.93■■□□□ 1.1
SMG9-203ENST00000595700 VGFO15240 615 aaPredicted RBP21.92■■□□□ 1.1
SMG9-203ENST00000595700 SPATA31E1Q6ZUB1 1445 aa21.92■■□□□ 1.1
SMG9-203ENST00000595700 PHLPP1O60346 1717 aa21.9■■□□□ 1.1
SMG9-203ENST00000595700 NALCNQ8IZF0 1738 aa21.9■■□□□ 1.1
SMG9-203ENST00000595700 RGL3Q3MIN7 710 aa21.89■■□□□ 1.09
SMG9-203ENST00000595700 SLAIN2Q9P270 581 aa21.89■■□□□ 1.09
SMG9-203ENST00000595700 ILDR2Q71H61 639 aa21.88■■□□□ 1.09
SMG9-203ENST00000595700 C19orf44Q9H6X5 657 aa21.86■■□□□ 1.09
SMG9-203ENST00000595700 ATF3P18847 181 aa21.84■■□□□ 1.09
SMG9-203ENST00000595700 ADGRF5Q8IZF2 1346 aa21.83■■□□□ 1.09
SMG9-203ENST00000595700 CADPS2Q86UW7 1296 aa21.83■■□□□ 1.09
SMG9-203ENST00000595700 DCCP43146 1447 aa21.83■■□□□ 1.09
SMG9-203ENST00000595700 PTCH1Q13635 1447 aa21.83■■□□□ 1.09
SMG9-203ENST00000595700 ADGRL3Q9HAR2 1447 aa21.82■■□□□ 1.08
SMG9-203ENST00000595700 ANKRD30BQ9BXX2 1392 aa21.82■■□□□ 1.08
SMG9-203ENST00000595700 COL16A1Q07092 1604 aaPredicted RBP21.82■■□□□ 1.08
SMG9-203ENST00000595700 ROBO2Q9HCK4 1378 aa21.8■■□□□ 1.08
SMG9-203ENST00000595700 PRAG1Q86YV5 1406 aa21.79■■□□□ 1.08
SMG9-203ENST00000595700 ASXL1Q8IXJ9 1541 aa21.79■■□□□ 1.08
SMG9-203ENST00000595700 AHDC1Q5TGY3 1603 aaPredicted RBP21.79■■□□□ 1.08
SMG9-203ENST00000595700 PIK3C2GO75747 1445 aa21.78■■□□□ 1.08
SMG9-203ENST00000595700 MST1RQ04912 1400 aa21.78■■□□□ 1.08
SMG9-203ENST00000595700 KNDC1Q76NI1 1749 aa21.77■■□□□ 1.08
SMG9-203ENST00000595700 PHF23Q9BUL5 403 aaPredicted RBP21.76■■□□□ 1.07
SMG9-203ENST00000595700 MYOM2P54296 1465 aa21.76■■□□□ 1.07
SMG9-203ENST00000595700 HRCP23327 699 aa21.74■■□□□ 1.07
SMG9-203ENST00000595700 LAMC1P11047 1609 aa21.74■■□□□ 1.07
SMG9-203ENST00000595700 NHSL1Q5SYE7 1610 aa21.74■■□□□ 1.07
SMG9-203ENST00000595700 BRINP3Q76B58 766 aa21.73■■□□□ 1.07
SMG9-203ENST00000595700 NRXN1Q9ULB1 1477 aa21.73■■□□□ 1.07
SMG9-203ENST00000595700 SHPRHQ149N8 1683 aa21.71■■□□□ 1.07
SMG9-203ENST00000595700 JCADQ9P266 1359 aa21.7■■□□□ 1.07
SMG9-203ENST00000595700 TECPR2O15040 1411 aa21.7■■□□□ 1.06
SMG9-203ENST00000595700 TMEM132EQ6IEE7 984 aa21.7■■□□□ 1.06
SMG9-203ENST00000595700 STK26Q9P289 416 aa21.7■■□□□ 1.06
SMG9-203ENST00000595700 LRPPRCP42704 1394 aaKnown RBP21.7■■□□□ 1.06
SMG9-203ENST00000595700 C1orf167Q5SNV9 1468 aa21.68■■□□□ 1.06
SMG9-203ENST00000595700 CDC42BPGQ6DT37 1551 aa21.68■■□□□ 1.06
SMG9-203ENST00000595700 YTHDC2Q9H6S0 1430 aaKnown RBP21.67■■□□□ 1.06
SMG9-203ENST00000595700 ABCC11Q96J66 1382 aa21.65■■□□□ 1.06
SMG9-203ENST00000595700 PLEKHH1Q9ULM0 1364 aa21.64■■□□□ 1.05
SMG9-203ENST00000595700 SOCS7O14512 581 aa21.63■■□□□ 1.05
SMG9-203ENST00000595700 CFAP70Q5T0N1 1121 aa21.63■■□□□ 1.05
SMG9-203ENST00000595700 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
SMG9-203ENST00000595700 C14orf93Q9H972 538 aaKnown RBP21.63■■□□□ 1.05
SMG9-203ENST00000595700 LRP6O75581 1613 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms