RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 UBAP1LF5GYI3 381 aa19.29■□□□□ 0.68
DDX39A-218ENST00000592632 ZFYVE9O95405 1425 aa19.27■□□□□ 0.68
DDX39A-218ENST00000592632 TRPM2O94759 1503 aa19.27■□□□□ 0.68
DDX39A-218ENST00000592632 RIMS2Q9UQ26 1411 aa19.26■□□□□ 0.67
DDX39A-218ENST00000592632 HDGFP51858 240 aaKnown RBP19.26■□□□□ 0.67
DDX39A-218ENST00000592632 CLTCL1P53675 1640 aa19.25■□□□□ 0.67
DDX39A-218ENST00000592632 IQGAP1P46940 1657 aa19.25■□□□□ 0.67
DDX39A-218ENST00000592632 NUTM2DQ5VT03 806 aaPredicted RBP19.24■□□□□ 0.67
DDX39A-218ENST00000592632 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.24■□□□□ 0.67
DDX39A-218ENST00000592632 ZNF326Q5BKZ1 582 aaKnown RBP19.21■□□□□ 0.67
DDX39A-218ENST00000592632 ILDR2Q71H61 639 aa19.21■□□□□ 0.67
DDX39A-218ENST00000592632 SLC26A8Q96RN1 970 aa19.21■□□□□ 0.67
DDX39A-218ENST00000592632 PPP1R15AO75807 674 aaPredicted RBP19.2■□□□□ 0.66
DDX39A-218ENST00000592632 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
DDX39A-218ENST00000592632 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
DDX39A-218ENST00000592632 KIF1BO60333 1816 aa19.2■□□□□ 0.66
DDX39A-218ENST00000592632 PLEKHG1Q9ULL1 1385 aa19.19■□□□□ 0.66
DDX39A-218ENST00000592632 CPS1P31327 1500 aa19.19■□□□□ 0.66
DDX39A-218ENST00000592632 BCANQ96GW7 911 aa19.18■□□□□ 0.66
DDX39A-218ENST00000592632 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
DDX39A-218ENST00000592632 CCDC144AA2RUR9 1427 aa19.16■□□□□ 0.66
DDX39A-218ENST00000592632 TBX22Q9Y458 520 aa19.15■□□□□ 0.66
DDX39A-218ENST00000592632 ANKRD30BQ9BXX2 1392 aa19.15■□□□□ 0.66
DDX39A-218ENST00000592632 STRCP1A6NGW2 1772 aa19.14■□□□□ 0.66
DDX39A-218ENST00000592632 PIP4K2BP78356 416 aa19.14■□□□□ 0.65
DDX39A-218ENST00000592632 RPGRIP1LQ68CZ1 1315 aa19.14■□□□□ 0.65
DDX39A-218ENST00000592632 SPATA31E1Q6ZUB1 1445 aa19.13■□□□□ 0.65
DDX39A-218ENST00000592632 NEXMIFQ5QGS0 1516 aa19.12■□□□□ 0.65
DDX39A-218ENST00000592632 ADAMTS13Q76LX8 1427 aa19.12■□□□□ 0.65
DDX39A-218ENST00000592632 TOM1O60784 492 aa19.12■□□□□ 0.65
DDX39A-218ENST00000592632 KCNA6P17658 529 aa19.12■□□□□ 0.65
DDX39A-218ENST00000592632 RGL3Q3MIN7 710 aa19.12■□□□□ 0.65
DDX39A-218ENST00000592632 SOCS7O14512 581 aa19.1■□□□□ 0.65
DDX39A-218ENST00000592632 VGFO15240 615 aaPredicted RBP19.1■□□□□ 0.65
DDX39A-218ENST00000592632 LRRC7Q96NW7 1537 aa19.07■□□□□ 0.64
DDX39A-218ENST00000592632 HSPA1LP34931 641 aa19.07■□□□□ 0.64
DDX39A-218ENST00000592632 CHD2O14647 1828 aaKnown RBP19.05■□□□□ 0.64
DDX39A-218ENST00000592632 NRXN3Q9Y4C0 1643 aa19.05■□□□□ 0.64
DDX39A-218ENST00000592632 PPLO60437 1756 aa19.05■□□□□ 0.64
DDX39A-218ENST00000592632 SETBP1Q9Y6X0 1596 aa19.05■□□□□ 0.64
DDX39A-218ENST00000592632 ADGRF5Q8IZF2 1346 aa19.04■□□□□ 0.64
DDX39A-218ENST00000592632 PROSER2Q86WR7 435 aaPredicted RBP19.03■□□□□ 0.64
DDX39A-218ENST00000592632 PIK3R4Q99570 1358 aa19.03■□□□□ 0.64
DDX39A-218ENST00000592632 DIP2AQ14689 1571 aa19.02■□□□□ 0.64
DDX39A-218ENST00000592632 METP08581 1390 aa19.02■□□□□ 0.64
DDX39A-218ENST00000592632 PTPRUQ92729 1446 aa19.01■□□□□ 0.63
DDX39A-218ENST00000592632 RBM33Q96EV2 1170 aaKnown RBP19.01■□□□□ 0.63
DDX39A-218ENST00000592632 AMOTL2Q9Y2J4 779 aa19.01■□□□□ 0.63
DDX39A-218ENST00000592632 NWD1Q149M9 1564 aa19■□□□□ 0.63
DDX39A-218ENST00000592632 TMEM94Q12767 1356 aa18.99■□□□□ 0.63
DDX39A-218ENST00000592632 XIRP1Q702N8 1843 aaKnown RBP18.99■□□□□ 0.63
DDX39A-218ENST00000592632 MED1Q15648 1581 aaPredicted RBP18.98■□□□□ 0.63
DDX39A-218ENST00000592632 IFT172Q9UG01 1749 aa18.98■□□□□ 0.63
DDX39A-218ENST00000592632 ALKQ9UM73 1620 aa18.98■□□□□ 0.63
DDX39A-218ENST00000592632 NKTRP30414 1462 aaKnown RBP18.97■□□□□ 0.63
DDX39A-218ENST00000592632 DHX57Q6P158 1386 aaKnown RBP18.95■□□□□ 0.62
DDX39A-218ENST00000592632 SETD1AO15047 1707 aaKnown RBP18.94■□□□□ 0.62
DDX39A-218ENST00000592632 DCAF11Q8TEB1 546 aa18.93■□□□□ 0.62
DDX39A-218ENST00000592632 SIN3AQ96ST3 1273 aa18.93■□□□□ 0.62
DDX39A-218ENST00000592632 C14orf93Q9H972 538 aaKnown RBP18.93■□□□□ 0.62
DDX39A-218ENST00000592632 KDM2AQ9Y2K7 1162 aa18.93■□□□□ 0.62
DDX39A-218ENST00000592632 PIK3C2GO75747 1445 aa18.92■□□□□ 0.62
DDX39A-218ENST00000592632 PCGF6Q9BYE7 350 aa18.92■□□□□ 0.62
DDX39A-218ENST00000592632 NRXN1Q9ULB1 1477 aa18.91■□□□□ 0.62
DDX39A-218ENST00000592632 STAC3Q96MF2 364 aa18.91■□□□□ 0.62
DDX39A-218ENST00000592632 XRN1Q8IZH2 1706 aaKnown RBP18.91■□□□□ 0.62
DDX39A-218ENST00000592632 MYOM2P54296 1465 aa18.9■□□□□ 0.62
DDX39A-218ENST00000592632 CFAP70Q5T0N1 1121 aa18.9■□□□□ 0.62
DDX39A-218ENST00000592632 TMEM132EQ6IEE7 984 aa18.9■□□□□ 0.62
DDX39A-218ENST00000592632 PHF23Q9BUL5 403 aaPredicted RBP18.9■□□□□ 0.62
DDX39A-218ENST00000592632 NCOA3Q9Y6Q9 1424 aa18.9■□□□□ 0.62
DDX39A-218ENST00000592632 C19orf44Q9H6X5 657 aa18.87■□□□□ 0.61
DDX39A-218ENST00000592632 MSH6P52701 1360 aa18.86■□□□□ 0.61
DDX39A-218ENST00000592632 ROBO2Q9HCK4 1378 aa18.86■□□□□ 0.61
DDX39A-218ENST00000592632 NEUROD1Q13562 356 aa18.86■□□□□ 0.61
DDX39A-218ENST00000592632 C14orf37Q86TY3 774 aa18.86■□□□□ 0.61
DDX39A-218ENST00000592632 STK26Q9P289 416 aa18.86■□□□□ 0.61
DDX39A-218ENST00000592632 LRPPRCP42704 1394 aaKnown RBP18.84■□□□□ 0.61
DDX39A-218ENST00000592632 L3MBTL2Q969R5 705 aa18.84■□□□□ 0.61
DDX39A-218ENST00000592632 ASXL1Q8IXJ9 1541 aa18.84■□□□□ 0.61
DDX39A-218ENST00000592632 PRAG1Q86YV5 1406 aa18.83■□□□□ 0.61
DDX39A-218ENST00000592632 ABCC11Q96J66 1382 aa18.83■□□□□ 0.61
DDX39A-218ENST00000592632 SLAIN2Q9P270 581 aa18.83■□□□□ 0.6
DDX39A-218ENST00000592632 PTCH1Q13635 1447 aa18.82■□□□□ 0.6
DDX39A-218ENST00000592632 YTHDC2Q9H6S0 1430 aaKnown RBP18.81■□□□□ 0.6
DDX39A-218ENST00000592632 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-218ENST00000592632 ATF3P18847 181 aa18.8■□□□□ 0.6
DDX39A-218ENST00000592632 WAPLQ7Z5K2 1190 aa18.8■□□□□ 0.6
DDX39A-218ENST00000592632 CADPS2Q86UW7 1296 aa18.8■□□□□ 0.6
DDX39A-218ENST00000592632 TECPR2O15040 1411 aa18.8■□□□□ 0.6
DDX39A-218ENST00000592632 SIRT1Q96EB6 747 aa18.79■□□□□ 0.6
DDX39A-218ENST00000592632 FAM135BQ49AJ0 1406 aa18.79■□□□□ 0.6
DDX39A-218ENST00000592632 ADGRL3Q9HAR2 1447 aa18.77■□□□□ 0.6
DDX39A-218ENST00000592632 LAMC1P11047 1609 aa18.77■□□□□ 0.6
DDX39A-218ENST00000592632 PLEKHH1Q9ULM0 1364 aa18.76■□□□□ 0.59
DDX39A-218ENST00000592632 ADGRB1O14514 1584 aa18.76■□□□□ 0.59
DDX39A-218ENST00000592632 DCCP43146 1447 aa18.74■□□□□ 0.59
DDX39A-218ENST00000592632 NBPF1Q3BBV0 1214 aa18.74■□□□□ 0.59
DDX39A-218ENST00000592632 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
DDX39A-218ENST00000592632 KNDC1Q76NI1 1749 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms