RNA–Protein interactions for RNA: ENST00000589017.5

PRKAR1A-216, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3

Gene PRKAR1A, Length 1,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-216ENST00000589017 HDGFP51858 240 aaKnown RBP28.06■■■□□ 2.08
PRKAR1A-216ENST00000589017 XIRP1Q702N8 1843 aaKnown RBP28.06■■■□□ 2.08
PRKAR1A-216ENST00000589017 CLTCL1P53675 1640 aa28.04■■■□□ 2.08
PRKAR1A-216ENST00000589017 ALKQ9UM73 1620 aa28.04■■■□□ 2.08
PRKAR1A-216ENST00000589017 NWD1Q149M9 1564 aa28.04■■■□□ 2.08
PRKAR1A-216ENST00000589017 SLC26A8Q96RN1 970 aa28.04■■■□□ 2.08
PRKAR1A-216ENST00000589017 TOM1O60784 492 aa28.03■■■□□ 2.08
PRKAR1A-216ENST00000589017 PPP1R15AO75807 674 aaPredicted RBP28.03■■■□□ 2.08
PRKAR1A-216ENST00000589017 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.03■■■□□ 2.08
PRKAR1A-216ENST00000589017 TRIM52Q96A61 297 aa28.02■■■□□ 2.08
PRKAR1A-216ENST00000589017 KCNA6P17658 529 aa27.99■■■□□ 2.07
PRKAR1A-216ENST00000589017 BCANQ96GW7 911 aa27.99■■■□□ 2.07
PRKAR1A-216ENST00000589017 KIF1BO60333 1816 aa27.98■■■□□ 2.07
PRKAR1A-216ENST00000589017 DIP2AQ14689 1571 aa27.98■■■□□ 2.07
PRKAR1A-216ENST00000589017 CHD2O14647 1828 aaKnown RBP27.97■■■□□ 2.07
PRKAR1A-216ENST00000589017 NKTRP30414 1462 aaKnown RBP27.97■■■□□ 2.07
PRKAR1A-216ENST00000589017 PIP4K2BP78356 416 aa27.94■■■□□ 2.06
PRKAR1A-216ENST00000589017 SLC4A1APQ9BWU0 796 aaKnown RBP27.94■■■□□ 2.06
PRKAR1A-216ENST00000589017 SENP3Q9H4L4 574 aaPredicted RBP27.94■■■□□ 2.06
PRKAR1A-216ENST00000589017 SCAF1Q9H7N4 1312 aaKnown RBP27.93■■■□□ 2.06
PRKAR1A-216ENST00000589017 ADAMTS13Q76LX8 1427 aa27.93■■■□□ 2.06
PRKAR1A-216ENST00000589017 NUTM2DQ5VT03 806 aaPredicted RBP27.93■■■□□ 2.06
PRKAR1A-216ENST00000589017 TBX22Q9Y458 520 aa27.92■■■□□ 2.06
PRKAR1A-216ENST00000589017 TMEM94Q12767 1356 aa27.9■■■□□ 2.06
PRKAR1A-216ENST00000589017 NRXN3Q9Y4C0 1643 aa27.9■■■□□ 2.06
PRKAR1A-216ENST00000589017 NEXMIFQ5QGS0 1516 aa27.9■■■□□ 2.06
PRKAR1A-216ENST00000589017 SETBP1Q9Y6X0 1596 aa27.89■■■□□ 2.05
PRKAR1A-216ENST00000589017 ZNF326Q5BKZ1 582 aaKnown RBP27.87■■■□□ 2.05
PRKAR1A-216ENST00000589017 PIK3R4Q99570 1358 aa27.86■■■□□ 2.05
PRKAR1A-216ENST00000589017 PROSER2Q86WR7 435 aaPredicted RBP27.86■■■□□ 2.05
PRKAR1A-216ENST00000589017 SETD5Q9C0A6 1442 aa27.84■■■□□ 2.05
PRKAR1A-216ENST00000589017 HSPA1LP34931 641 aa27.83■■■□□ 2.05
PRKAR1A-216ENST00000589017 ACIN1Q9UKV3 1341 aaKnown RBP27.82■■■□□ 2.04
PRKAR1A-216ENST00000589017 MPHOSPH9Q99550 1183 aa27.8■■■□□ 2.04
PRKAR1A-216ENST00000589017 FOXD1Q16676 465 aa27.79■■■□□ 2.04
PRKAR1A-216ENST00000589017 RBM33Q96EV2 1170 aaKnown RBP27.79■■■□□ 2.04
PRKAR1A-216ENST00000589017 PPLO60437 1756 aa27.78■■■□□ 2.04
PRKAR1A-216ENST00000589017 XRN1Q8IZH2 1706 aaKnown RBP27.78■■■□□ 2.04
PRKAR1A-216ENST00000589017 PTPRUQ92729 1446 aa27.76■■■□□ 2.04
PRKAR1A-216ENST00000589017 NCOA3Q9Y6Q9 1424 aa27.75■■■□□ 2.03
PRKAR1A-216ENST00000589017 MSH6P52701 1360 aa27.75■■■□□ 2.03
PRKAR1A-216ENST00000589017 CCDC144AA2RUR9 1427 aa27.75■■■□□ 2.03
PRKAR1A-216ENST00000589017 RAB3GAP2Q9H2M9 1393 aa27.74■■■□□ 2.03
PRKAR1A-216ENST00000589017 DISP3Q9P2K9 1392 aa27.73■■■□□ 2.03
PRKAR1A-216ENST00000589017 RPGRIP1LQ68CZ1 1315 aa27.72■■■□□ 2.03
PRKAR1A-216ENST00000589017 FAM135BQ49AJ0 1406 aa27.72■■■□□ 2.03
PRKAR1A-216ENST00000589017 SETD1AO15047 1707 aaKnown RBP27.72■■■□□ 2.03
PRKAR1A-216ENST00000589017 ROBO1Q9Y6N7 1651 aa27.72■■■□□ 2.03
PRKAR1A-216ENST00000589017 AMOTL2Q9Y2J4 779 aa27.71■■■□□ 2.03
PRKAR1A-216ENST00000589017 METP08581 1390 aa27.7■■■□□ 2.02
PRKAR1A-216ENST00000589017 VGFO15240 615 aaPredicted RBP27.69■■■□□ 2.02
PRKAR1A-216ENST00000589017 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.68■■■□□ 2.02
PRKAR1A-216ENST00000589017 IFT172Q9UG01 1749 aa27.68■■■□□ 2.02
PRKAR1A-216ENST00000589017 SPATA31E1Q6ZUB1 1445 aa27.67■■■□□ 2.02
PRKAR1A-216ENST00000589017 MED1Q15648 1581 aaPredicted RBP27.65■■■□□ 2.02
PRKAR1A-216ENST00000589017 C14orf37Q86TY3 774 aa27.63■■■□□ 2.01
PRKAR1A-216ENST00000589017 SLAIN2Q9P270 581 aa27.61■■■□□ 2.01
PRKAR1A-216ENST00000589017 C19orf44Q9H6X5 657 aa27.6■■■□□ 2.01
PRKAR1A-216ENST00000589017 ANKRD30BQ9BXX2 1392 aa27.58■■■□□ 2.01
PRKAR1A-216ENST00000589017 DCCP43146 1447 aa27.58■■■□□ 2
PRKAR1A-216ENST00000589017 CADPS2Q86UW7 1296 aa27.57■■■□□ 2
PRKAR1A-216ENST00000589017 NALCNQ8IZF0 1738 aa27.56■■■□□ 2
PRKAR1A-216ENST00000589017 RGL3Q3MIN7 710 aa27.56■■■□□ 2
PRKAR1A-216ENST00000589017 PRAG1Q86YV5 1406 aa27.56■■■□□ 2
PRKAR1A-216ENST00000589017 HRCP23327 699 aa27.55■■■□□ 2
PRKAR1A-216ENST00000589017 PTCH1Q13635 1447 aa27.55■■■□□ 2
PRKAR1A-216ENST00000589017 PHLPP1O60346 1717 aa27.55■■■□□ 2
PRKAR1A-216ENST00000589017 ATF3P18847 181 aa27.54■■■□□ 2
PRKAR1A-216ENST00000589017 ADGRL3Q9HAR2 1447 aa27.53■■■□□ 2
PRKAR1A-216ENST00000589017 ADGRF5Q8IZF2 1346 aa27.53■■■□□ 2
PRKAR1A-216ENST00000589017 PIK3C2GO75747 1445 aa27.5■■□□□ 1.99
PRKAR1A-216ENST00000589017 ILDR2Q71H61 639 aa27.48■■□□□ 1.99
PRKAR1A-216ENST00000589017 ROBO2Q9HCK4 1378 aa27.48■■□□□ 1.99
PRKAR1A-216ENST00000589017 COL16A1Q07092 1604 aaPredicted RBP27.47■■□□□ 1.99
PRKAR1A-216ENST00000589017 AHDC1Q5TGY3 1603 aaPredicted RBP27.47■■□□□ 1.99
PRKAR1A-216ENST00000589017 MYOM2P54296 1465 aa27.46■■□□□ 1.99
PRKAR1A-216ENST00000589017 MST1RQ04912 1400 aa27.46■■□□□ 1.99
PRKAR1A-216ENST00000589017 ASXL1Q8IXJ9 1541 aa27.46■■□□□ 1.99
PRKAR1A-216ENST00000589017 NRXN1Q9ULB1 1477 aa27.44■■□□□ 1.98
PRKAR1A-216ENST00000589017 LAMC1P11047 1609 aa27.44■■□□□ 1.98
PRKAR1A-216ENST00000589017 KNDC1Q76NI1 1749 aa27.44■■□□□ 1.98
PRKAR1A-216ENST00000589017 TECPR2O15040 1411 aa27.41■■□□□ 1.98
PRKAR1A-216ENST00000589017 BRINP3Q76B58 766 aa27.4■■□□□ 1.98
PRKAR1A-216ENST00000589017 NHSL1Q5SYE7 1610 aa27.39■■□□□ 1.98
PRKAR1A-216ENST00000589017 LRPPRCP42704 1394 aaKnown RBP27.38■■□□□ 1.97
PRKAR1A-216ENST00000589017 JCADQ9P266 1359 aa27.37■■□□□ 1.97
PRKAR1A-216ENST00000589017 PHF23Q9BUL5 403 aaPredicted RBP27.36■■□□□ 1.97
PRKAR1A-216ENST00000589017 CDC42BPGQ6DT37 1551 aa27.35■■□□□ 1.97
PRKAR1A-216ENST00000589017 ABCC11Q96J66 1382 aa27.35■■□□□ 1.97
PRKAR1A-216ENST00000589017 SHPRHQ149N8 1683 aa27.34■■□□□ 1.97
PRKAR1A-216ENST00000589017 YTHDC2Q9H6S0 1430 aaKnown RBP27.33■■□□□ 1.97
PRKAR1A-216ENST00000589017 C1orf167Q5SNV9 1468 aa27.33■■□□□ 1.97
PRKAR1A-216ENST00000589017 TMEM132EQ6IEE7 984 aa27.33■■□□□ 1.97
PRKAR1A-216ENST00000589017 C14orf93Q9H972 538 aaKnown RBP27.33■■□□□ 1.97
PRKAR1A-216ENST00000589017 STK26Q9P289 416 aa27.31■■□□□ 1.96
PRKAR1A-216ENST00000589017 CFAP70Q5T0N1 1121 aa27.28■■□□□ 1.96
PRKAR1A-216ENST00000589017 DHX57Q6P158 1386 aaKnown RBP27.26■■□□□ 1.95
PRKAR1A-216ENST00000589017 PLEKHH1Q9ULM0 1364 aa27.25■■□□□ 1.95
PRKAR1A-216ENST00000589017 SOCS7O14512 581 aa27.25■■□□□ 1.95
PRKAR1A-216ENST00000589017 WAPLQ7Z5K2 1190 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms