RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 PLEKHG1Q9ULL1 1385 aa27.24■■□□□ 1.95
HDAC5-209ENST00000588703 SLC26A8Q96RN1 970 aa27.24■■□□□ 1.95
HDAC5-209ENST00000588703 NWD1Q149M9 1564 aa27.22■■□□□ 1.95
HDAC5-209ENST00000588703 CLTCL1P53675 1640 aa27.22■■□□□ 1.95
HDAC5-209ENST00000588703 TRPM2O94759 1503 aa27.21■■□□□ 1.95
HDAC5-209ENST00000588703 TOM1O60784 492 aa27.21■■□□□ 1.95
HDAC5-209ENST00000588703 CHD2O14647 1828 aaKnown RBP27.19■■□□□ 1.94
HDAC5-209ENST00000588703 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
HDAC5-209ENST00000588703 PPP1R15AO75807 674 aaPredicted RBP27.18■■□□□ 1.94
HDAC5-209ENST00000588703 KCNA6P17658 529 aa27.17■■□□□ 1.94
HDAC5-209ENST00000588703 PIP4K2BP78356 416 aa27.17■■□□□ 1.94
HDAC5-209ENST00000588703 HDGFP51858 240 aaKnown RBP27.16■■□□□ 1.94
HDAC5-209ENST00000588703 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.16■■□□□ 1.94
HDAC5-209ENST00000588703 SCAF1Q9H7N4 1312 aaKnown RBP27.16■■□□□ 1.94
HDAC5-209ENST00000588703 NUTM2DQ5VT03 806 aaPredicted RBP27.15■■□□□ 1.94
HDAC5-209ENST00000588703 TRIM52Q96A61 297 aa27.15■■□□□ 1.94
HDAC5-209ENST00000588703 BCANQ96GW7 911 aa27.15■■□□□ 1.94
HDAC5-209ENST00000588703 KIF1BO60333 1816 aa27.15■■□□□ 1.94
HDAC5-209ENST00000588703 ADAMTS13Q76LX8 1427 aa27.15■■□□□ 1.94
HDAC5-209ENST00000588703 NKTRP30414 1462 aaKnown RBP27.14■■□□□ 1.94
HDAC5-209ENST00000588703 DIP2AQ14689 1571 aa27.13■■□□□ 1.93
HDAC5-209ENST00000588703 TMEM94Q12767 1356 aa27.11■■□□□ 1.93
HDAC5-209ENST00000588703 NRXN3Q9Y4C0 1643 aa27.1■■□□□ 1.93
HDAC5-209ENST00000588703 HSPA1LP34931 641 aa27.09■■□□□ 1.93
HDAC5-209ENST00000588703 TBX22Q9Y458 520 aa27.09■■□□□ 1.93
HDAC5-209ENST00000588703 NEXMIFQ5QGS0 1516 aa27.08■■□□□ 1.93
HDAC5-209ENST00000588703 SLC4A1APQ9BWU0 796 aaKnown RBP27.08■■□□□ 1.93
HDAC5-209ENST00000588703 SETBP1Q9Y6X0 1596 aa27.06■■□□□ 1.92
HDAC5-209ENST00000588703 PROSER2Q86WR7 435 aaPredicted RBP27.06■■□□□ 1.92
HDAC5-209ENST00000588703 RBM33Q96EV2 1170 aaKnown RBP27.05■■□□□ 1.92
HDAC5-209ENST00000588703 ZNF326Q5BKZ1 582 aaKnown RBP27.03■■□□□ 1.92
HDAC5-209ENST00000588703 PIK3R4Q99570 1358 aa27.01■■□□□ 1.91
HDAC5-209ENST00000588703 DISP3Q9P2K9 1392 aa27■■□□□ 1.91
HDAC5-209ENST00000588703 FOXD1Q16676 465 aa26.99■■□□□ 1.91
HDAC5-209ENST00000588703 PTPRUQ92729 1446 aa26.99■■□□□ 1.91
HDAC5-209ENST00000588703 XRN1Q8IZH2 1706 aaKnown RBP26.98■■□□□ 1.91
HDAC5-209ENST00000588703 SETD5Q9C0A6 1442 aa26.98■■□□□ 1.91
HDAC5-209ENST00000588703 PPLO60437 1756 aa26.97■■□□□ 1.91
HDAC5-209ENST00000588703 MPHOSPH9Q99550 1183 aa26.94■■□□□ 1.9
HDAC5-209ENST00000588703 ROBO1Q9Y6N7 1651 aa26.94■■□□□ 1.9
HDAC5-209ENST00000588703 MSH6P52701 1360 aa26.94■■□□□ 1.9
HDAC5-209ENST00000588703 SETD1AO15047 1707 aaKnown RBP26.93■■□□□ 1.9
HDAC5-209ENST00000588703 FAM135BQ49AJ0 1406 aa26.92■■□□□ 1.9
HDAC5-209ENST00000588703 NCOA3Q9Y6Q9 1424 aa26.91■■□□□ 1.9
HDAC5-209ENST00000588703 METP08581 1390 aa26.91■■□□□ 1.9
HDAC5-209ENST00000588703 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.9■■□□□ 1.9
HDAC5-209ENST00000588703 MED1Q15648 1581 aaPredicted RBP26.9■■□□□ 1.9
HDAC5-209ENST00000588703 AMOTL2Q9Y2J4 779 aa26.9■■□□□ 1.9
HDAC5-209ENST00000588703 RAB3GAP2Q9H2M9 1393 aa26.89■■□□□ 1.9
HDAC5-209ENST00000588703 CCDC144AA2RUR9 1427 aa26.88■■□□□ 1.89
HDAC5-209ENST00000588703 IFT172Q9UG01 1749 aa26.87■■□□□ 1.89
HDAC5-209ENST00000588703 RPGRIP1LQ68CZ1 1315 aa26.86■■□□□ 1.89
HDAC5-209ENST00000588703 SPATA31E1Q6ZUB1 1445 aa26.85■■□□□ 1.89
HDAC5-209ENST00000588703 ACIN1Q9UKV3 1341 aaKnown RBP26.85■■□□□ 1.89
HDAC5-209ENST00000588703 VGFO15240 615 aaPredicted RBP26.83■■□□□ 1.89
HDAC5-209ENST00000588703 ILDR2Q71H61 639 aa26.83■■□□□ 1.89
HDAC5-209ENST00000588703 SLAIN2Q9P270 581 aa26.82■■□□□ 1.88
HDAC5-209ENST00000588703 C14orf37Q86TY3 774 aa26.81■■□□□ 1.88
HDAC5-209ENST00000588703 C19orf44Q9H6X5 657 aa26.78■■□□□ 1.88
HDAC5-209ENST00000588703 NALCNQ8IZF0 1738 aa26.78■■□□□ 1.88
HDAC5-209ENST00000588703 PHLPP1O60346 1717 aa26.77■■□□□ 1.88
HDAC5-209ENST00000588703 DCCP43146 1447 aa26.75■■□□□ 1.87
HDAC5-209ENST00000588703 RGL3Q3MIN7 710 aa26.75■■□□□ 1.87
HDAC5-209ENST00000588703 CADPS2Q86UW7 1296 aa26.75■■□□□ 1.87
HDAC5-209ENST00000588703 ADGRF5Q8IZF2 1346 aa26.74■■□□□ 1.87
HDAC5-209ENST00000588703 PTCH1Q13635 1447 aa26.73■■□□□ 1.87
HDAC5-209ENST00000588703 PRAG1Q86YV5 1406 aa26.73■■□□□ 1.87
HDAC5-209ENST00000588703 ATF3P18847 181 aa26.72■■□□□ 1.87
HDAC5-209ENST00000588703 ADGRL3Q9HAR2 1447 aa26.72■■□□□ 1.87
HDAC5-209ENST00000588703 ANKRD30BQ9BXX2 1392 aa26.71■■□□□ 1.87
HDAC5-209ENST00000588703 COL16A1Q07092 1604 aaPredicted RBP26.71■■□□□ 1.87
HDAC5-209ENST00000588703 ROBO2Q9HCK4 1378 aa26.7■■□□□ 1.86
HDAC5-209ENST00000588703 AHDC1Q5TGY3 1603 aaPredicted RBP26.68■■□□□ 1.86
HDAC5-209ENST00000588703 PIK3C2GO75747 1445 aa26.67■■□□□ 1.86
HDAC5-209ENST00000588703 MST1RQ04912 1400 aa26.67■■□□□ 1.86
HDAC5-209ENST00000588703 ASXL1Q8IXJ9 1541 aa26.67■■□□□ 1.86
HDAC5-209ENST00000588703 HRCP23327 699 aa26.66■■□□□ 1.86
HDAC5-209ENST00000588703 MYOM2P54296 1465 aa26.62■■□□□ 1.85
HDAC5-209ENST00000588703 NRXN1Q9ULB1 1477 aa26.62■■□□□ 1.85
HDAC5-209ENST00000588703 BRINP3Q76B58 766 aa26.62■■□□□ 1.85
HDAC5-209ENST00000588703 KNDC1Q76NI1 1749 aa26.62■■□□□ 1.85
HDAC5-209ENST00000588703 NHSL1Q5SYE7 1610 aa26.61■■□□□ 1.85
HDAC5-209ENST00000588703 TECPR2O15040 1411 aa26.58■■□□□ 1.85
HDAC5-209ENST00000588703 PHF23Q9BUL5 403 aaPredicted RBP26.58■■□□□ 1.85
HDAC5-209ENST00000588703 JCADQ9P266 1359 aa26.58■■□□□ 1.84
HDAC5-209ENST00000588703 LAMC1P11047 1609 aa26.57■■□□□ 1.84
HDAC5-209ENST00000588703 LRPPRCP42704 1394 aaKnown RBP26.57■■□□□ 1.84
HDAC5-209ENST00000588703 SHPRHQ149N8 1683 aa26.56■■□□□ 1.84
HDAC5-209ENST00000588703 C1orf167Q5SNV9 1468 aa26.55■■□□□ 1.84
HDAC5-209ENST00000588703 SOCS7O14512 581 aa26.54■■□□□ 1.84
HDAC5-209ENST00000588703 TMEM132EQ6IEE7 984 aa26.54■■□□□ 1.84
HDAC5-209ENST00000588703 ABCC11Q96J66 1382 aa26.53■■□□□ 1.84
HDAC5-209ENST00000588703 CDC42BPGQ6DT37 1551 aa26.53■■□□□ 1.84
HDAC5-209ENST00000588703 YTHDC2Q9H6S0 1430 aaKnown RBP26.52■■□□□ 1.84
HDAC5-209ENST00000588703 STK26Q9P289 416 aa26.52■■□□□ 1.84
HDAC5-209ENST00000588703 RGS17Q9UGC6 210 aaPredicted RBP26.52■■□□□ 1.84
HDAC5-209ENST00000588703 C14orf93Q9H972 538 aaKnown RBP26.51■■□□□ 1.83
HDAC5-209ENST00000588703 PLEKHH1Q9ULM0 1364 aa26.48■■□□□ 1.83
HDAC5-209ENST00000588703 LRP6O75581 1613 aa26.48■■□□□ 1.83
HDAC5-209ENST00000588703 CFAP70Q5T0N1 1121 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms