RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 TOM1O60784 492 aa21.74■■□□□ 1.07
DDX39A-208ENST00000588692 CHGAP10645 457 aaKnown RBP21.74■■□□□ 1.07
DDX39A-208ENST00000588692 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.74■■□□□ 1.07
DDX39A-208ENST00000588692 PPP1R15AO75807 674 aaPredicted RBP21.72■■□□□ 1.07
DDX39A-208ENST00000588692 NWD1Q149M9 1564 aa21.72■■□□□ 1.07
DDX39A-208ENST00000588692 SLC26A8Q96RN1 970 aa21.71■■□□□ 1.07
DDX39A-208ENST00000588692 XIRP1Q702N8 1843 aaKnown RBP21.7■■□□□ 1.07
DDX39A-208ENST00000588692 TRIM52Q96A61 297 aa21.7■■□□□ 1.06
DDX39A-208ENST00000588692 BCANQ96GW7 911 aa21.7■■□□□ 1.06
DDX39A-208ENST00000588692 CLTCL1P53675 1640 aa21.7■■□□□ 1.06
DDX39A-208ENST00000588692 DIP2AQ14689 1571 aa21.69■■□□□ 1.06
DDX39A-208ENST00000588692 NKTRP30414 1462 aaKnown RBP21.69■■□□□ 1.06
DDX39A-208ENST00000588692 ALKQ9UM73 1620 aa21.69■■□□□ 1.06
DDX39A-208ENST00000588692 KCNA6P17658 529 aa21.69■■□□□ 1.06
DDX39A-208ENST00000588692 KIF1BO60333 1816 aa21.67■■□□□ 1.06
DDX39A-208ENST00000588692 CHD2O14647 1828 aaKnown RBP21.67■■□□□ 1.06
DDX39A-208ENST00000588692 SLC4A1APQ9BWU0 796 aaKnown RBP21.64■■□□□ 1.06
DDX39A-208ENST00000588692 PIP4K2BP78356 416 aa21.64■■□□□ 1.05
DDX39A-208ENST00000588692 TBX22Q9Y458 520 aa21.64■■□□□ 1.05
DDX39A-208ENST00000588692 SCAF1Q9H7N4 1312 aaKnown RBP21.63■■□□□ 1.05
DDX39A-208ENST00000588692 ADAMTS13Q76LX8 1427 aa21.63■■□□□ 1.05
DDX39A-208ENST00000588692 ACIN1Q9UKV3 1341 aaKnown RBP21.63■■□□□ 1.05
DDX39A-208ENST00000588692 TMEM94Q12767 1356 aa21.62■■□□□ 1.05
DDX39A-208ENST00000588692 PIK3R4Q99570 1358 aa21.61■■□□□ 1.05
DDX39A-208ENST00000588692 NUTM2DQ5VT03 806 aaPredicted RBP21.6■■□□□ 1.05
DDX39A-208ENST00000588692 SETBP1Q9Y6X0 1596 aa21.6■■□□□ 1.05
DDX39A-208ENST00000588692 NEXMIFQ5QGS0 1516 aa21.59■■□□□ 1.05
DDX39A-208ENST00000588692 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
DDX39A-208ENST00000588692 NRXN3Q9Y4C0 1643 aa21.59■■□□□ 1.05
DDX39A-208ENST00000588692 PROSER2Q86WR7 435 aaPredicted RBP21.58■■□□□ 1.05
DDX39A-208ENST00000588692 SENP3Q9H4L4 574 aaPredicted RBP21.58■■□□□ 1.05
DDX39A-208ENST00000588692 SETD5Q9C0A6 1442 aa21.56■■□□□ 1.04
DDX39A-208ENST00000588692 HSPA1LP34931 641 aa21.55■■□□□ 1.04
DDX39A-208ENST00000588692 NCOA3Q9Y6Q9 1424 aa21.54■■□□□ 1.04
DDX39A-208ENST00000588692 MSH6P52701 1360 aa21.52■■□□□ 1.04
DDX39A-208ENST00000588692 MPHOSPH9Q99550 1183 aa21.52■■□□□ 1.03
DDX39A-208ENST00000588692 CCDC144AA2RUR9 1427 aa21.51■■□□□ 1.03
DDX39A-208ENST00000588692 XRN1Q8IZH2 1706 aaKnown RBP21.51■■□□□ 1.03
DDX39A-208ENST00000588692 PPLO60437 1756 aa21.5■■□□□ 1.03
DDX39A-208ENST00000588692 RPGRIP1LQ68CZ1 1315 aa21.5■■□□□ 1.03
DDX39A-208ENST00000588692 DISP3Q9P2K9 1392 aa21.5■■□□□ 1.03
DDX39A-208ENST00000588692 RBM33Q96EV2 1170 aaKnown RBP21.49■■□□□ 1.03
DDX39A-208ENST00000588692 FAM135BQ49AJ0 1406 aa21.49■■□□□ 1.03
DDX39A-208ENST00000588692 FOXD1Q16676 465 aa21.48■■□□□ 1.03
DDX39A-208ENST00000588692 PTPRUQ92729 1446 aa21.48■■□□□ 1.03
DDX39A-208ENST00000588692 RAB3GAP2Q9H2M9 1393 aa21.47■■□□□ 1.03
DDX39A-208ENST00000588692 VGFO15240 615 aaPredicted RBP21.47■■□□□ 1.03
DDX39A-208ENST00000588692 AMOTL2Q9Y2J4 779 aa21.46■■□□□ 1.03
DDX39A-208ENST00000588692 ROBO1Q9Y6N7 1651 aa21.46■■□□□ 1.03
DDX39A-208ENST00000588692 SETD1AO15047 1707 aaKnown RBP21.44■■□□□ 1.02
DDX39A-208ENST00000588692 METP08581 1390 aa21.43■■□□□ 1.02
DDX39A-208ENST00000588692 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.43■■□□□ 1.02
DDX39A-208ENST00000588692 SPATA31E1Q6ZUB1 1445 aa21.42■■□□□ 1.02
DDX39A-208ENST00000588692 IFT172Q9UG01 1749 aa21.42■■□□□ 1.02
DDX39A-208ENST00000588692 C14orf37Q86TY3 774 aa21.42■■□□□ 1.02
DDX39A-208ENST00000588692 MED1Q15648 1581 aaPredicted RBP21.41■■□□□ 1.02
DDX39A-208ENST00000588692 C19orf44Q9H6X5 657 aa21.39■■□□□ 1.02
DDX39A-208ENST00000588692 SLAIN2Q9P270 581 aa21.39■■□□□ 1.02
DDX39A-208ENST00000588692 DCCP43146 1447 aa21.39■■□□□ 1.02
DDX39A-208ENST00000588692 CADPS2Q86UW7 1296 aa21.39■■□□□ 1.01
DDX39A-208ENST00000588692 ANKRD30BQ9BXX2 1392 aa21.38■■□□□ 1.01
DDX39A-208ENST00000588692 PRAG1Q86YV5 1406 aa21.37■■□□□ 1.01
DDX39A-208ENST00000588692 HRCP23327 699 aa21.37■■□□□ 1.01
DDX39A-208ENST00000588692 PTCH1Q13635 1447 aa21.36■■□□□ 1.01
DDX39A-208ENST00000588692 ATF3P18847 181 aa21.36■■□□□ 1.01
DDX39A-208ENST00000588692 RGL3Q3MIN7 710 aa21.33■■□□□ 1.01
DDX39A-208ENST00000588692 PHLPP1O60346 1717 aa21.33■■□□□ 1.01
DDX39A-208ENST00000588692 NALCNQ8IZF0 1738 aa21.33■■□□□ 1.01
DDX39A-208ENST00000588692 ADGRL3Q9HAR2 1447 aa21.33■■□□□ 1.01
DDX39A-208ENST00000588692 ADGRF5Q8IZF2 1346 aa21.3■■□□□ 1
DDX39A-208ENST00000588692 PIK3C2GO75747 1445 aa21.3■■□□□ 1
DDX39A-208ENST00000588692 AHDC1Q5TGY3 1603 aaPredicted RBP21.28■■□□□ 1
DDX39A-208ENST00000588692 MYOM2P54296 1465 aa21.28■■□□□ 1
DDX39A-208ENST00000588692 LAMC1P11047 1609 aa21.28■■□□□ 1
DDX39A-208ENST00000588692 COL16A1Q07092 1604 aaPredicted RBP21.28■■□□□ 1
DDX39A-208ENST00000588692 ROBO2Q9HCK4 1378 aa21.27■■□□□ 1
DDX39A-208ENST00000588692 MST1RQ04912 1400 aa21.27■■□□□ 1
DDX39A-208ENST00000588692 ILDR2Q71H61 639 aa21.26■□□□□ 0.99
DDX39A-208ENST00000588692 NRXN1Q9ULB1 1477 aa21.26■□□□□ 0.99
DDX39A-208ENST00000588692 KNDC1Q76NI1 1749 aa21.26■□□□□ 0.99
DDX39A-208ENST00000588692 TECPR2O15040 1411 aa21.25■□□□□ 0.99
DDX39A-208ENST00000588692 ASXL1Q8IXJ9 1541 aa21.23■□□□□ 0.99
DDX39A-208ENST00000588692 JCADQ9P266 1359 aa21.22■□□□□ 0.99
DDX39A-208ENST00000588692 BRINP3Q76B58 766 aa21.22■□□□□ 0.99
DDX39A-208ENST00000588692 PHF23Q9BUL5 403 aaPredicted RBP21.22■□□□□ 0.99
DDX39A-208ENST00000588692 LRPPRCP42704 1394 aaKnown RBP21.22■□□□□ 0.99
DDX39A-208ENST00000588692 NHSL1Q5SYE7 1610 aa21.21■□□□□ 0.99
DDX39A-208ENST00000588692 CDC42BPGQ6DT37 1551 aa21.2■□□□□ 0.98
DDX39A-208ENST00000588692 ABCC11Q96J66 1382 aa21.19■□□□□ 0.98
DDX39A-208ENST00000588692 SHPRHQ149N8 1683 aa21.19■□□□□ 0.98
DDX39A-208ENST00000588692 YTHDC2Q9H6S0 1430 aaKnown RBP21.18■□□□□ 0.98
DDX39A-208ENST00000588692 C14orf93Q9H972 538 aaKnown RBP21.17■□□□□ 0.98
DDX39A-208ENST00000588692 C1orf167Q5SNV9 1468 aa21.17■□□□□ 0.98
DDX39A-208ENST00000588692 TMEM132EQ6IEE7 984 aa21.14■□□□□ 0.98
DDX39A-208ENST00000588692 STAC3Q96MF2 364 aa21.14■□□□□ 0.98
DDX39A-208ENST00000588692 STK26Q9P289 416 aa21.14■□□□□ 0.98
DDX39A-208ENST00000588692 SOCS7O14512 581 aa21.13■□□□□ 0.97
DDX39A-208ENST00000588692 DHX57Q6P158 1386 aaKnown RBP21.13■□□□□ 0.97
DDX39A-208ENST00000588692 SPATA31A6Q5VVP1 1343 aa21.13■□□□□ 0.97
DDX39A-208ENST00000588692 CFAP70Q5T0N1 1121 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms