RNA–Protein interactions for RNA: ENST00000581790.5

NF1-221, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 1,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-221ENST00000581790 PPP4CP60510 307 aa10.11□□□□□ -0.79
NF1-221ENST00000581790 URB2Q14146 1524 aaKnown RBP10.11□□□□□ -0.79
NF1-221ENST00000581790 CTTNBP2Q8WZ74 1663 aa10.1□□□□□ -0.79
NF1-221ENST00000581790 PPP1R18Q6NYC8 613 aa10.1□□□□□ -0.79
NF1-221ENST00000581790 RBM33Q96EV2 1170 aaKnown RBP10.09□□□□□ -0.79
NF1-221ENST00000581790 MTRQ99707 1265 aa10.09□□□□□ -0.79
NF1-221ENST00000581790 GTPBP6O43824 516 aaPredicted RBP10.08□□□□□ -0.8
NF1-221ENST00000581790 IL21Q9HBE4 155 aa10.08□□□□□ -0.8
NF1-221ENST00000581790 TSKSQ9UJT2 592 aa10.08□□□□□ -0.8
NF1-221ENST00000581790 ABCA5Q8WWZ7 1642 aa10.07□□□□□ -0.8
NF1-221ENST00000581790 PBRM1Q86U86 1689 aa10.07□□□□□ -0.8
NF1-221ENST00000581790 RAD54L2Q9Y4B4 1467 aa10.07□□□□□ -0.8
NF1-221ENST00000581790 ZNF775Q96BV0 537 aaPredicted RBP10.07□□□□□ -0.8
NF1-221ENST00000581790 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
NF1-221ENST00000581790 PACS2Q86VP3 889 aa10.06□□□□□ -0.8
NF1-221ENST00000581790 VPS8Q8N3P4 1428 aa10.06□□□□□ -0.8
NF1-221ENST00000581790 SAMD7Q7Z3H4 446 aa10.05□□□□□ -0.8
NF1-221ENST00000581790 MRC2Q9UBG0 1479 aa10.04□□□□□ -0.8
NF1-221ENST00000581790 TARBP1Q13395 1621 aaKnown RBP10.04□□□□□ -0.8
NF1-221ENST00000581790 IGF1RP08069 1367 aa10.04□□□□□ -0.8
NF1-221ENST00000581790 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.04□□□□□ -0.8
NF1-221ENST00000581790 CARMIL1Q5VZK9 1371 aa10.03□□□□□ -0.8
NF1-221ENST00000581790 DPYSL4O14531 572 aa10.03□□□□□ -0.8
NF1-221ENST00000581790 HRCP23327 699 aa10.02□□□□□ -0.81
NF1-221ENST00000581790 CAMK2BQ13554 666 aa10.02□□□□□ -0.81
NF1-221ENST00000581790 DDX12PQ92771 950 aa10.02□□□□□ -0.81
NF1-221ENST00000581790 EN1Q05925 392 aaPredicted RBP10.01□□□□□ -0.81
NF1-221ENST00000581790 TSR1Q2NL82 804 aaKnown RBP10.01□□□□□ -0.81
NF1-221ENST00000581790 CADPS2Q86UW7 1296 aa10.01□□□□□ -0.81
NF1-221ENST00000581790 ZNF516Q92618 1163 aa10.01□□□□□ -0.81
NF1-221ENST00000581790 ARAP1Q96P48 1450 aa10□□□□□ -0.81
NF1-221ENST00000581790 SMAPO00193 183 aa10□□□□□ -0.81
NF1-221ENST00000581790 WDR62O43379 1518 aa10□□□□□ -0.81
NF1-221ENST00000581790 GAPVD1Q14C86 1478 aa9.99□□□□□ -0.81
NF1-221ENST00000581790 MAP3K7O43318 606 aa9.99□□□□□ -0.81
NF1-221ENST00000581790 PPARGC1BQ86YN6 1023 aaKnown RBP9.99□□□□□ -0.81
NF1-221ENST00000581790 NBR1Q14596 966 aa9.98□□□□□ -0.81
NF1-221ENST00000581790 RANGAP1P46060 587 aaPredicted RBP9.97□□□□□ -0.81
NF1-221ENST00000581790 ARHGAP35Q9NRY4 1499 aa9.97□□□□□ -0.81
NF1-221ENST00000581790 THOC2Q8NI27 1593 aaKnown RBP9.97□□□□□ -0.81
NF1-221ENST00000581790 NKX2-3Q8TAU0 364 aa9.96□□□□□ -0.82
NF1-221ENST00000581790 CDCA7LQ96GN5 454 aa9.96□□□□□ -0.82
NF1-221ENST00000581790 FAM198AQ9UFP1 575 aa9.96□□□□□ -0.82
NF1-221ENST00000581790 ERCC6Q03468 1493 aa9.96□□□□□ -0.82
NF1-221ENST00000581790 EFCAB5A4FU69 1503 aa9.96□□□□□ -0.82
NF1-221ENST00000581790 APLP1P51693 650 aa9.95□□□□□ -0.82
NF1-221ENST00000581790 IFT140Q96RY7 1462 aa9.94□□□□□ -0.82
NF1-221ENST00000581790 NBPF26B4DH59 902 aa9.94□□□□□ -0.82
NF1-221ENST00000581790 C3orf80F5H4A9 247 aa9.94□□□□□ -0.82
NF1-221ENST00000581790 GGCXP38435 758 aa9.94□□□□□ -0.82
NF1-221ENST00000581790 PRSS12P56730 875 aa9.94□□□□□ -0.82
NF1-221ENST00000581790 RNF40O75150 1001 aa9.93□□□□□ -0.82
NF1-221ENST00000581790 ADAMTS12P58397 1594 aa9.92□□□□□ -0.82
NF1-221ENST00000581790 TDRD9Q8NDG6 1382 aaKnown RBP9.92□□□□□ -0.82
NF1-221ENST00000581790 TRIM67Q6ZTA4 783 aa9.92□□□□□ -0.82
NF1-221ENST00000581790 TATDN2Q93075 761 aa9.92□□□□□ -0.82
NF1-221ENST00000581790 CFAP43Q8NDM7 1665 aa9.92□□□□□ -0.82
NF1-221ENST00000581790 PNMA3Q9UL41 463 aa9.91□□□□□ -0.82
NF1-221ENST00000581790 TTBK1Q5TCY1 1321 aaPredicted RBP9.9□□□□□ -0.82
NF1-221ENST00000581790 EIF4G3O43432 1585 aaKnown RBP9.9□□□□□ -0.82
NF1-221ENST00000581790 ZEB1P37275 1124 aaPredicted RBP9.9□□□□□ -0.82
NF1-221ENST00000581790 FHAD1B1AJZ9 1412 aa9.9□□□□□ -0.83
NF1-221ENST00000581790 SAMD9Q5K651 1589 aa9.89□□□□□ -0.83
NF1-221ENST00000581790 PDIA6Q15084 440 aa9.89□□□□□ -0.83
NF1-221ENST00000581790 TMUB1Q9BVT8 246 aa9.89□□□□□ -0.83
NF1-221ENST00000581790 GRIN2BQ13224 1484 aa9.89□□□□□ -0.83
NF1-221ENST00000581790 MAP3K1Q13233 1512 aa9.88□□□□□ -0.83
NF1-221ENST00000581790 COPS2P61201 443 aa9.88□□□□□ -0.83
NF1-221ENST00000581790 MYT1Q01538 1121 aa9.88□□□□□ -0.83
NF1-221ENST00000581790 PKDCCQ504Y2 493 aa9.88□□□□□ -0.83
NF1-221ENST00000581790 CERKQ8TCT0 537 aa9.88□□□□□ -0.83
NF1-221ENST00000581790 PCF11O94913 1555 aaKnown RBP9.88□□□□□ -0.83
NF1-221ENST00000581790 TIAM1Q13009 1591 aa9.88□□□□□ -0.83
NF1-221ENST00000581790 POTECB2RU33 542 aa9.86□□□□□ -0.83
NF1-221ENST00000581790 AQRO60306 1485 aaKnown RBP eCLIP9.85□□□□□ -0.832e-6■■■■■ 26.9
NF1-221ENST00000581790 IQGAP2Q13576 1575 aa9.85□□□□□ -0.83
NF1-221ENST00000581790 PRIM1P49642 420 aaKnown RBP9.85□□□□□ -0.83
NF1-221ENST00000581790 NECTIN2Q92692 538 aa9.85□□□□□ -0.83
NF1-221ENST00000581790 DGAT1O75907 488 aa9.84□□□□□ -0.83
NF1-221ENST00000581790 HDGFP51858 240 aaKnown RBP9.84□□□□□ -0.83
NF1-221ENST00000581790 NUDT18Q6ZVK8 323 aa9.84□□□□□ -0.83
NF1-221ENST00000581790 EMID1Q96A84 441 aaPredicted RBP9.84□□□□□ -0.83
NF1-221ENST00000581790 FYCO1Q9BQS8 1478 aa9.84□□□□□ -0.83
NF1-221ENST00000581790 ZNF608Q9ULD9 1512 aaPredicted RBP9.83□□□□□ -0.84
NF1-221ENST00000581790 LRRIQ1Q96JM4 1722 aa9.83□□□□□ -0.84
NF1-221ENST00000581790 SLC19A1P41440 591 aa9.83□□□□□ -0.84
NF1-221ENST00000581790 FHOD3Q2V2M9 1422 aa9.82□□□□□ -0.84
NF1-221ENST00000581790 FMN1Q68DA7 1419 aa9.82□□□□□ -0.84
NF1-221ENST00000581790 ZPR1O75312 459 aa9.82□□□□□ -0.84
NF1-221ENST00000581790 RBM27Q9P2N5 1060 aaKnown RBP9.82□□□□□ -0.84
NF1-221ENST00000581790 SNAPC4Q5SXM2 1469 aa9.81□□□□□ -0.84
NF1-221ENST00000581790 MAGI1Q96QZ7 1491 aaPredicted RBP9.81□□□□□ -0.84
NF1-221ENST00000581790 RNF223E7ERA6 249 aa9.81□□□□□ -0.84
NF1-221ENST00000581790 PRR20EP86478 221 aa9.81□□□□□ -0.84
NF1-221ENST00000581790 PRR20CP86479 221 aa9.81□□□□□ -0.84
NF1-221ENST00000581790 PRR20DP86480 221 aa9.81□□□□□ -0.84
NF1-221ENST00000581790 PRR20BP86481 221 aa9.81□□□□□ -0.84
NF1-221ENST00000581790 PRR20AP86496 221 aa9.81□□□□□ -0.84
NF1-221ENST00000581790 CASKIN1Q8WXD9 1431 aa9.81□□□□□ -0.84
NF1-221ENST00000581790 SPDYE16A6NNV3 312 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms