RNA–Protein interactions for RNA: ENST00000581790.5

NF1-221, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 1,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-221ENST00000581790 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
NF1-221ENST00000581790 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
NF1-221ENST00000581790 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
NF1-221ENST00000581790 PHF23Q9BUL5 403 aaPredicted RBP22.54■■□□□ 1.2
NF1-221ENST00000581790 FOXD1Q16676 465 aa21.44■■□□□ 1.02
NF1-221ENST00000581790 POTEDQ86YR6 584 aa20.62■□□□□ 0.89
NF1-221ENST00000581790 MSH5O43196 834 aa20.25■□□□□ 0.83
NF1-221ENST00000581790 PIAS4Q8N2W9 510 aaPredicted RBP19.92■□□□□ 0.78
NF1-221ENST00000581790 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
NF1-221ENST00000581790 PPP6R1Q9UPN7 881 aa19.64■□□□□ 0.73
NF1-221ENST00000581790 ADRA2BP18089 450 aa19.55■□□□□ 0.72
NF1-221ENST00000581790 DMRT2Q9Y5R5 561 aa18.11■□□□□ 0.49
NF1-221ENST00000581790 MAPK8IP2Q13387 824 aaPredicted RBP18.1■□□□□ 0.49
NF1-221ENST00000581790 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
NF1-221ENST00000581790 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
NF1-221ENST00000581790 DCAF8L1A6NGE4 600 aa17.38■□□□□ 0.37
NF1-221ENST00000581790 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
NF1-221ENST00000581790 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
NF1-221ENST00000581790 PPP4R3CPQ6ZMV5 832 aa17.22■□□□□ 0.35
NF1-221ENST00000581790 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
NF1-221ENST00000581790 RNF216Q9NWF9 866 aaPredicted RBP16.98■□□□□ 0.31
NF1-221ENST00000581790 C1QBPQ07021 282 aaKnown RBP16.94■□□□□ 0.3
NF1-221ENST00000581790 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
NF1-221ENST00000581790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.42■□□□□ 0.22
NF1-221ENST00000581790 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
NF1-221ENST00000581790 NPM3O75607 178 aaKnown RBP16.18■□□□□ 0.18
NF1-221ENST00000581790 POTEHQ6S545 545 aa16.05■□□□□ 0.16
NF1-221ENST00000581790 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
NF1-221ENST00000581790 DSG3P32926 999 aa15.97■□□□□ 0.15
NF1-221ENST00000581790 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
NF1-221ENST00000581790 CAPN15O75808 1086 aa15.94■□□□□ 0.14
NF1-221ENST00000581790 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
NF1-221ENST00000581790 TRHP20396 242 aaPredicted RBP15.56■□□□□ 0.08
NF1-221ENST00000581790 ABCB7O75027 752 aa15.54■□□□□ 0.08
NF1-221ENST00000581790 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
NF1-221ENST00000581790 APLP2Q06481 763 aa15.53■□□□□ 0.08
NF1-221ENST00000581790 KCNA4P22459 653 aa15.43■□□□□ 0.06
NF1-221ENST00000581790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
NF1-221ENST00000581790 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
NF1-221ENST00000581790 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
NF1-221ENST00000581790 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
NF1-221ENST00000581790 CHRDL2Q6WN34 429 aa15.12■□□□□ 0.01
NF1-221ENST00000581790 POLA2Q14181 598 aa15.02■□□□□ -0
NF1-221ENST00000581790 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
NF1-221ENST00000581790 SP7Q8TDD2 431 aaPredicted RBP14.82□□□□□ -0.04
NF1-221ENST00000581790 AKT1S1Q96B36 256 aa14.79□□□□□ -0.04
NF1-221ENST00000581790 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
NF1-221ENST00000581790 ATF5Q9Y2D1 282 aaPredicted RBP14.67□□□□□ -0.06
NF1-221ENST00000581790 PIP4P2Q8N4L2 257 aa14.66□□□□□ -0.06
NF1-221ENST00000581790 REM2Q8IYK8 340 aaPredicted RBP14.65□□□□□ -0.06
NF1-221ENST00000581790 OSCARQ8IYS5 282 aa14.61□□□□□ -0.07
NF1-221ENST00000581790 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
NF1-221ENST00000581790 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
NF1-221ENST00000581790 HAX1O00165 279 aa14.5□□□□□ -0.09
NF1-221ENST00000581790 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.098e-7■■■□□ 17.3
NF1-221ENST00000581790 SLC4A1APQ9BWU0 796 aaKnown RBP14.46□□□□□ -0.09
NF1-221ENST00000581790 NISCHQ9Y2I1 1504 aa14.31□□□□□ -0.12
NF1-221ENST00000581790 EVX2Q03828 476 aa14.29□□□□□ -0.12
NF1-221ENST00000581790 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
NF1-221ENST00000581790 ZBTB22O15209 634 aa14.2□□□□□ -0.14
NF1-221ENST00000581790 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
NF1-221ENST00000581790 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
NF1-221ENST00000581790 ATXN8OSP0DMR3 200 aa14.14□□□□□ -0.15
NF1-221ENST00000581790 PRKAR2AP13861 404 aaKnown RBP14.13□□□□□ -0.15
NF1-221ENST00000581790 FBLN2P98095 1184 aa14.12□□□□□ -0.15
NF1-221ENST00000581790 SPDYE1Q8NFV5 336 aaPredicted RBP14.07□□□□□ -0.16
NF1-221ENST00000581790 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
NF1-221ENST00000581790 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
NF1-221ENST00000581790 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
NF1-221ENST00000581790 SSUH2Q9Y2M2 353 aa13.98□□□□□ -0.17
NF1-221ENST00000581790 GABBR2O75899 941 aa13.94□□□□□ -0.18
NF1-221ENST00000581790 ZNF692Q9BU19 519 aaPredicted RBP13.93□□□□□ -0.18
NF1-221ENST00000581790 LHX8Q68G74 356 aa13.87□□□□□ -0.19
NF1-221ENST00000581790 CHADLQ6NUI6 762 aa13.87□□□□□ -0.19
NF1-221ENST00000581790 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
NF1-221ENST00000581790 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
NF1-221ENST00000581790 CD44P16070 742 aaKnown RBP13.66□□□□□ -0.22
NF1-221ENST00000581790 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
NF1-221ENST00000581790 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
NF1-221ENST00000581790 CLCN6P51797 869 aa13.53□□□□□ -0.24
NF1-221ENST00000581790 DCBLD2Q96PD2 775 aa13.46□□□□□ -0.25
NF1-221ENST00000581790 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
NF1-221ENST00000581790 PLSCR2Q9NRY7 297 aa13.41□□□□□ -0.26
NF1-221ENST00000581790 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
NF1-221ENST00000581790 CREBZFQ9NS37 354 aa13.33□□□□□ -0.28
NF1-221ENST00000581790 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
NF1-221ENST00000581790 OTUD5Q96G74 571 aa13.24□□□□□ -0.29
NF1-221ENST00000581790 STAG3Q9UJ98 1225 aa13.23□□□□□ -0.29
NF1-221ENST00000581790 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
NF1-221ENST00000581790 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
NF1-221ENST00000581790 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
NF1-221ENST00000581790 POTEMA6NI47 508 aa13.1□□□□□ -0.31
NF1-221ENST00000581790 PELP1Q8IZL8 1130 aaKnown RBP13.08□□□□□ -0.32
NF1-221ENST00000581790 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
NF1-221ENST00000581790 SPDYE4A6NLX3 237 aa13.05□□□□□ -0.32
NF1-221ENST00000581790 POTEGQ6S5H5 508 aa13.05□□□□□ -0.32
NF1-221ENST00000581790 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
NF1-221ENST00000581790 MNX1P50219 401 aaPredicted RBP13.03□□□□□ -0.32
NF1-221ENST00000581790 METRNQ9UJH8 293 aa13□□□□□ -0.33
NF1-221ENST00000581790 ASTLQ6HA08 431 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms