RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 SCAF1Q9H7N4 1312 aaKnown RBP21.79■■□□□ 1.08
CMTM3-215ENST00000568477 BCANQ96GW7 911 aa21.78■■□□□ 1.08
CMTM3-215ENST00000568477 SLC26A8Q96RN1 970 aa21.78■■□□□ 1.08
CMTM3-215ENST00000568477 PIP4K2BP78356 416 aa21.77■■□□□ 1.08
CMTM3-215ENST00000568477 PLEKHG1Q9ULL1 1385 aa21.76■■□□□ 1.07
CMTM3-215ENST00000568477 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.76■■□□□ 1.07
CMTM3-215ENST00000568477 SPHKAPQ2M3C7 1700 aa21.75■■□□□ 1.07
CMTM3-215ENST00000568477 KCNA6P17658 529 aa21.74■■□□□ 1.07
CMTM3-215ENST00000568477 TRIM52Q96A61 297 aa21.72■■□□□ 1.07
CMTM3-215ENST00000568477 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
CMTM3-215ENST00000568477 ALKQ9UM73 1620 aa21.71■■□□□ 1.07
CMTM3-215ENST00000568477 NUTM2DQ5VT03 806 aaPredicted RBP21.69■■□□□ 1.06
CMTM3-215ENST00000568477 NWD1Q149M9 1564 aa21.69■■□□□ 1.06
CMTM3-215ENST00000568477 TMEM94Q12767 1356 aa21.68■■□□□ 1.06
CMTM3-215ENST00000568477 NKTRP30414 1462 aaKnown RBP21.68■■□□□ 1.06
CMTM3-215ENST00000568477 TRPM2O94759 1503 aa21.68■■□□□ 1.06
CMTM3-215ENST00000568477 HSPA1LP34931 641 aa21.67■■□□□ 1.06
CMTM3-215ENST00000568477 XIRP1Q702N8 1843 aaKnown RBP21.66■■□□□ 1.06
CMTM3-215ENST00000568477 DISP3Q9P2K9 1392 aa21.66■■□□□ 1.06
CMTM3-215ENST00000568477 PROSER2Q86WR7 435 aaPredicted RBP21.66■■□□□ 1.06
CMTM3-215ENST00000568477 TBX22Q9Y458 520 aa21.66■■□□□ 1.06
CMTM3-215ENST00000568477 SLC4A1APQ9BWU0 796 aaKnown RBP21.65■■□□□ 1.06
CMTM3-215ENST00000568477 CLTCL1P53675 1640 aa21.65■■□□□ 1.06
CMTM3-215ENST00000568477 ZNF326Q5BKZ1 582 aaKnown RBP21.64■■□□□ 1.05
CMTM3-215ENST00000568477 DIP2AQ14689 1571 aa21.64■■□□□ 1.05
CMTM3-215ENST00000568477 ADAMTS13Q76LX8 1427 aa21.63■■□□□ 1.05
CMTM3-215ENST00000568477 CHD2O14647 1828 aaKnown RBP21.61■■□□□ 1.05
CMTM3-215ENST00000568477 RBM33Q96EV2 1170 aaKnown RBP21.6■■□□□ 1.05
CMTM3-215ENST00000568477 PIK3R4Q99570 1358 aa21.6■■□□□ 1.05
CMTM3-215ENST00000568477 KIF1BO60333 1816 aa21.57■■□□□ 1.04
CMTM3-215ENST00000568477 MSH6P52701 1360 aa21.57■■□□□ 1.04
CMTM3-215ENST00000568477 SETBP1Q9Y6X0 1596 aa21.56■■□□□ 1.04
CMTM3-215ENST00000568477 NEXMIFQ5QGS0 1516 aa21.55■■□□□ 1.04
CMTM3-215ENST00000568477 NRXN3Q9Y4C0 1643 aa21.53■■□□□ 1.04
CMTM3-215ENST00000568477 FAM135BQ49AJ0 1406 aa21.53■■□□□ 1.04
CMTM3-215ENST00000568477 NCOA3Q9Y6Q9 1424 aa21.53■■□□□ 1.04
CMTM3-215ENST00000568477 ACIN1Q9UKV3 1341 aaKnown RBP21.53■■□□□ 1.04
CMTM3-215ENST00000568477 FOXD1Q16676 465 aa21.51■■□□□ 1.03
CMTM3-215ENST00000568477 MPHOSPH9Q99550 1183 aa21.51■■□□□ 1.03
CMTM3-215ENST00000568477 AMOTL2Q9Y2J4 779 aa21.51■■□□□ 1.03
CMTM3-215ENST00000568477 SETD5Q9C0A6 1442 aa21.51■■□□□ 1.03
CMTM3-215ENST00000568477 PTPRUQ92729 1446 aa21.5■■□□□ 1.03
CMTM3-215ENST00000568477 C14orf37Q86TY3 774 aa21.5■■□□□ 1.03
CMTM3-215ENST00000568477 RPGRIP1LQ68CZ1 1315 aa21.49■■□□□ 1.03
CMTM3-215ENST00000568477 CCDC144AA2RUR9 1427 aa21.48■■□□□ 1.03
CMTM3-215ENST00000568477 VGFO15240 615 aaPredicted RBP21.47■■□□□ 1.03
CMTM3-215ENST00000568477 MED1Q15648 1581 aaPredicted RBP21.47■■□□□ 1.03
CMTM3-215ENST00000568477 METP08581 1390 aa21.47■■□□□ 1.03
CMTM3-215ENST00000568477 SLAIN2Q9P270 581 aa21.46■■□□□ 1.03
CMTM3-215ENST00000568477 ROBO1Q9Y6N7 1651 aa21.46■■□□□ 1.03
CMTM3-215ENST00000568477 XRN1Q8IZH2 1706 aaKnown RBP21.46■■□□□ 1.03
CMTM3-215ENST00000568477 ILDR2Q71H61 639 aa21.45■■□□□ 1.02
CMTM3-215ENST00000568477 C19orf44Q9H6X5 657 aa21.44■■□□□ 1.02
CMTM3-215ENST00000568477 RAB3GAP2Q9H2M9 1393 aa21.43■■□□□ 1.02
CMTM3-215ENST00000568477 ATF3P18847 181 aa21.42■■□□□ 1.02
CMTM3-215ENST00000568477 CADPS2Q86UW7 1296 aa21.42■■□□□ 1.02
CMTM3-215ENST00000568477 PPLO60437 1756 aa21.41■■□□□ 1.02
CMTM3-215ENST00000568477 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.41■■□□□ 1.02
CMTM3-215ENST00000568477 SPATA31E1Q6ZUB1 1445 aa21.39■■□□□ 1.02
CMTM3-215ENST00000568477 DCCP43146 1447 aa21.38■■□□□ 1.01
CMTM3-215ENST00000568477 RGL3Q3MIN7 710 aa21.37■■□□□ 1.01
CMTM3-215ENST00000568477 SETD1AO15047 1707 aaKnown RBP21.36■■□□□ 1.01
CMTM3-215ENST00000568477 PHF23Q9BUL5 403 aaPredicted RBP21.36■■□□□ 1.01
CMTM3-215ENST00000568477 ANKRD30BQ9BXX2 1392 aa21.36■■□□□ 1.01
CMTM3-215ENST00000568477 PTCH1Q13635 1447 aa21.34■■□□□ 1.01
CMTM3-215ENST00000568477 ADGRL3Q9HAR2 1447 aa21.34■■□□□ 1.01
CMTM3-215ENST00000568477 PHLPP1O60346 1717 aa21.33■■□□□ 1.01
CMTM3-215ENST00000568477 ADGRF5Q8IZF2 1346 aa21.32■■□□□ 1
CMTM3-215ENST00000568477 PRAG1Q86YV5 1406 aa21.31■■□□□ 1
CMTM3-215ENST00000568477 IFT172Q9UG01 1749 aa21.3■■□□□ 1
CMTM3-215ENST00000568477 ROBO2Q9HCK4 1378 aa21.3■■□□□ 1
CMTM3-215ENST00000568477 SOCS7O14512 581 aa21.29■■□□□ 1
CMTM3-215ENST00000568477 MST1RQ04912 1400 aa21.29■■□□□ 1
CMTM3-215ENST00000568477 JCADQ9P266 1359 aa21.28■■□□□ 1
CMTM3-215ENST00000568477 HRCP23327 699 aa21.28■■□□□ 1
CMTM3-215ENST00000568477 BRINP3Q76B58 766 aa21.28■■□□□ 1
CMTM3-215ENST00000568477 NALCNQ8IZF0 1738 aa21.28■■□□□ 1
CMTM3-215ENST00000568477 AHDC1Q5TGY3 1603 aaPredicted RBP21.28■■□□□ 1
CMTM3-215ENST00000568477 COL16A1Q07092 1604 aaPredicted RBP21.27■■□□□ 1
CMTM3-215ENST00000568477 PIK3C2GO75747 1445 aa21.26■□□□□ 0.99
CMTM3-215ENST00000568477 ASXL1Q8IXJ9 1541 aa21.24■□□□□ 0.99
CMTM3-215ENST00000568477 LRPPRCP42704 1394 aaKnown RBP21.23■□□□□ 0.99
CMTM3-215ENST00000568477 MYOM2P54296 1465 aa21.22■□□□□ 0.99
CMTM3-215ENST00000568477 STK26Q9P289 416 aa21.21■□□□□ 0.99
CMTM3-215ENST00000568477 TECPR2O15040 1411 aa21.21■□□□□ 0.99
CMTM3-215ENST00000568477 NRXN1Q9ULB1 1477 aa21.2■□□□□ 0.98
CMTM3-215ENST00000568477 TMEM132EQ6IEE7 984 aa21.19■□□□□ 0.98
CMTM3-215ENST00000568477 ABCC11Q96J66 1382 aa21.19■□□□□ 0.98
CMTM3-215ENST00000568477 C1orf167Q5SNV9 1468 aa21.19■□□□□ 0.98
CMTM3-215ENST00000568477 SPATA31A6Q5VVP1 1343 aa21.18■□□□□ 0.98
CMTM3-215ENST00000568477 C14orf93Q9H972 538 aaKnown RBP21.17■□□□□ 0.98
CMTM3-215ENST00000568477 YTHDC2Q9H6S0 1430 aaKnown RBP21.17■□□□□ 0.98
CMTM3-215ENST00000568477 NHSL1Q5SYE7 1610 aa21.17■□□□□ 0.98
CMTM3-215ENST00000568477 KNDC1Q76NI1 1749 aa21.16■□□□□ 0.98
CMTM3-215ENST00000568477 LAMC1P11047 1609 aa21.16■□□□□ 0.98
CMTM3-215ENST00000568477 RGS17Q9UGC6 210 aaPredicted RBP21.16■□□□□ 0.98
CMTM3-215ENST00000568477 SHPRHQ149N8 1683 aa21.15■□□□□ 0.98
CMTM3-215ENST00000568477 CDC42BPGQ6DT37 1551 aa21.15■□□□□ 0.98
CMTM3-215ENST00000568477 CFAP70Q5T0N1 1121 aa21.14■□□□□ 0.97
CMTM3-215ENST00000568477 WAPLQ7Z5K2 1190 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms