RNA–Protein interactions for RNA: ENST00000568059.1

NEIL1-218, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 4

Gene NEIL1, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-218ENST00000568059 PLEKHG1Q9ULL1 1385 aa24.26■■□□□ 1.47
NEIL1-218ENST00000568059 CLTCL1P53675 1640 aa24.25■■□□□ 1.47
NEIL1-218ENST00000568059 NWD1Q149M9 1564 aa24.25■■□□□ 1.47
NEIL1-218ENST00000568059 TRIM52Q96A61 297 aa24.24■■□□□ 1.47
NEIL1-218ENST00000568059 HDGFP51858 240 aaKnown RBP24.23■■□□□ 1.47
NEIL1-218ENST00000568059 BCANQ96GW7 911 aa24.23■■□□□ 1.47
NEIL1-218ENST00000568059 XIRP1Q702N8 1843 aaKnown RBP24.22■■□□□ 1.47
NEIL1-218ENST00000568059 SLC26A8Q96RN1 970 aa24.22■■□□□ 1.47
NEIL1-218ENST00000568059 TOM1O60784 492 aa24.21■■□□□ 1.47
NEIL1-218ENST00000568059 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.21■■□□□ 1.47
NEIL1-218ENST00000568059 DIP2AQ14689 1571 aa24.2■■□□□ 1.47
NEIL1-218ENST00000568059 SCAF1Q9H7N4 1312 aaKnown RBP24.2■■□□□ 1.46
NEIL1-218ENST00000568059 KIF1BO60333 1816 aa24.2■■□□□ 1.46
NEIL1-218ENST00000568059 NKTRP30414 1462 aaKnown RBP24.19■■□□□ 1.46
NEIL1-218ENST00000568059 ALKQ9UM73 1620 aa24.19■■□□□ 1.46
NEIL1-218ENST00000568059 SENP3Q9H4L4 574 aaPredicted RBP24.18■■□□□ 1.46
NEIL1-218ENST00000568059 PIP4K2BP78356 416 aa24.16■■□□□ 1.46
NEIL1-218ENST00000568059 SLC4A1APQ9BWU0 796 aaKnown RBP24.16■■□□□ 1.46
NEIL1-218ENST00000568059 CHD2O14647 1828 aaKnown RBP24.15■■□□□ 1.46
NEIL1-218ENST00000568059 KCNA6P17658 529 aa24.15■■□□□ 1.46
NEIL1-218ENST00000568059 NUTM2DQ5VT03 806 aaPredicted RBP24.15■■□□□ 1.46
NEIL1-218ENST00000568059 ADAMTS13Q76LX8 1427 aa24.13■■□□□ 1.45
NEIL1-218ENST00000568059 ZNF326Q5BKZ1 582 aaKnown RBP24.12■■□□□ 1.45
NEIL1-218ENST00000568059 NEXMIFQ5QGS0 1516 aa24.11■■□□□ 1.45
NEIL1-218ENST00000568059 TMEM94Q12767 1356 aa24.11■■□□□ 1.45
NEIL1-218ENST00000568059 SETBP1Q9Y6X0 1596 aa24.11■■□□□ 1.45
NEIL1-218ENST00000568059 NRXN3Q9Y4C0 1643 aa24.1■■□□□ 1.45
NEIL1-218ENST00000568059 TBX22Q9Y458 520 aa24.08■■□□□ 1.45
NEIL1-218ENST00000568059 PROSER2Q86WR7 435 aaPredicted RBP24.07■■□□□ 1.44
NEIL1-218ENST00000568059 SETD5Q9C0A6 1442 aa24.07■■□□□ 1.44
NEIL1-218ENST00000568059 PIK3R4Q99570 1358 aa24.05■■□□□ 1.44
NEIL1-218ENST00000568059 HSPA1LP34931 641 aa24.02■■□□□ 1.44
NEIL1-218ENST00000568059 ACIN1Q9UKV3 1341 aaKnown RBP24.02■■□□□ 1.44
NEIL1-218ENST00000568059 CCDC144AA2RUR9 1427 aa24.01■■□□□ 1.43
NEIL1-218ENST00000568059 XRN1Q8IZH2 1706 aaKnown RBP24.01■■□□□ 1.43
NEIL1-218ENST00000568059 PPLO60437 1756 aa24.01■■□□□ 1.43
NEIL1-218ENST00000568059 FOXD1Q16676 465 aa24.01■■□□□ 1.43
NEIL1-218ENST00000568059 RBM33Q96EV2 1170 aaKnown RBP24.01■■□□□ 1.43
NEIL1-218ENST00000568059 MSH6P52701 1360 aa24.01■■□□□ 1.43
NEIL1-218ENST00000568059 MPHOSPH9Q99550 1183 aa23.99■■□□□ 1.43
NEIL1-218ENST00000568059 RAB3GAP2Q9H2M9 1393 aa23.99■■□□□ 1.43
NEIL1-218ENST00000568059 DISP3Q9P2K9 1392 aa23.99■■□□□ 1.43
NEIL1-218ENST00000568059 PTPRUQ92729 1446 aa23.97■■□□□ 1.43
NEIL1-218ENST00000568059 ROBO1Q9Y6N7 1651 aa23.96■■□□□ 1.43
NEIL1-218ENST00000568059 NCOA3Q9Y6Q9 1424 aa23.95■■□□□ 1.42
NEIL1-218ENST00000568059 SETD1AO15047 1707 aaKnown RBP23.95■■□□□ 1.42
NEIL1-218ENST00000568059 IFT172Q9UG01 1749 aa23.93■■□□□ 1.42
NEIL1-218ENST00000568059 RPGRIP1LQ68CZ1 1315 aa23.93■■□□□ 1.42
NEIL1-218ENST00000568059 METP08581 1390 aa23.92■■□□□ 1.42
NEIL1-218ENST00000568059 C14orf37Q86TY3 774 aa23.92■■□□□ 1.42
NEIL1-218ENST00000568059 AMOTL2Q9Y2J4 779 aa23.92■■□□□ 1.42
NEIL1-218ENST00000568059 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.92■■□□□ 1.42
NEIL1-218ENST00000568059 FAM135BQ49AJ0 1406 aa23.92■■□□□ 1.42
NEIL1-218ENST00000568059 MED1Q15648 1581 aaPredicted RBP23.91■■□□□ 1.42
NEIL1-218ENST00000568059 VGFO15240 615 aaPredicted RBP23.91■■□□□ 1.42
NEIL1-218ENST00000568059 SPATA31E1Q6ZUB1 1445 aa23.9■■□□□ 1.42
NEIL1-218ENST00000568059 NALCNQ8IZF0 1738 aa23.84■■□□□ 1.41
NEIL1-218ENST00000568059 DCCP43146 1447 aa23.84■■□□□ 1.41
NEIL1-218ENST00000568059 RGL3Q3MIN7 710 aa23.83■■□□□ 1.41
NEIL1-218ENST00000568059 PHLPP1O60346 1717 aa23.83■■□□□ 1.41
NEIL1-218ENST00000568059 PTCH1Q13635 1447 aa23.83■■□□□ 1.4
NEIL1-218ENST00000568059 ANKRD30BQ9BXX2 1392 aa23.82■■□□□ 1.4
NEIL1-218ENST00000568059 CADPS2Q86UW7 1296 aa23.82■■□□□ 1.4
NEIL1-218ENST00000568059 C19orf44Q9H6X5 657 aa23.82■■□□□ 1.4
NEIL1-218ENST00000568059 SLAIN2Q9P270 581 aa23.82■■□□□ 1.4
NEIL1-218ENST00000568059 ATF3P18847 181 aa23.81■■□□□ 1.4
NEIL1-218ENST00000568059 ADGRL3Q9HAR2 1447 aa23.8■■□□□ 1.4
NEIL1-218ENST00000568059 PRAG1Q86YV5 1406 aa23.79■■□□□ 1.4
NEIL1-218ENST00000568059 ADGRF5Q8IZF2 1346 aa23.78■■□□□ 1.4
NEIL1-218ENST00000568059 PIK3C2GO75747 1445 aa23.76■■□□□ 1.39
NEIL1-218ENST00000568059 MYOM2P54296 1465 aa23.75■■□□□ 1.39
NEIL1-218ENST00000568059 LAMC1P11047 1609 aa23.75■■□□□ 1.39
NEIL1-218ENST00000568059 COL16A1Q07092 1604 aaPredicted RBP23.75■■□□□ 1.39
NEIL1-218ENST00000568059 HRCP23327 699 aa23.75■■□□□ 1.39
NEIL1-218ENST00000568059 AHDC1Q5TGY3 1603 aaPredicted RBP23.74■■□□□ 1.39
NEIL1-218ENST00000568059 ROBO2Q9HCK4 1378 aa23.74■■□□□ 1.39
NEIL1-218ENST00000568059 ASXL1Q8IXJ9 1541 aa23.74■■□□□ 1.39
NEIL1-218ENST00000568059 KNDC1Q76NI1 1749 aa23.73■■□□□ 1.39
NEIL1-218ENST00000568059 MST1RQ04912 1400 aa23.73■■□□□ 1.39
NEIL1-218ENST00000568059 ILDR2Q71H61 639 aa23.7■■□□□ 1.38
NEIL1-218ENST00000568059 PHF23Q9BUL5 403 aaPredicted RBP23.7■■□□□ 1.38
NEIL1-218ENST00000568059 NRXN1Q9ULB1 1477 aa23.69■■□□□ 1.38
NEIL1-218ENST00000568059 TECPR2O15040 1411 aa23.67■■□□□ 1.38
NEIL1-218ENST00000568059 NHSL1Q5SYE7 1610 aa23.67■■□□□ 1.38
NEIL1-218ENST00000568059 CDC42BPGQ6DT37 1551 aa23.66■■□□□ 1.38
NEIL1-218ENST00000568059 BRINP3Q76B58 766 aa23.66■■□□□ 1.38
NEIL1-218ENST00000568059 LRPPRCP42704 1394 aaKnown RBP23.65■■□□□ 1.38
NEIL1-218ENST00000568059 JCADQ9P266 1359 aa23.65■■□□□ 1.38
NEIL1-218ENST00000568059 SHPRHQ149N8 1683 aa23.64■■□□□ 1.37
NEIL1-218ENST00000568059 YTHDC2Q9H6S0 1430 aaKnown RBP23.62■■□□□ 1.37
NEIL1-218ENST00000568059 C1orf167Q5SNV9 1468 aa23.62■■□□□ 1.37
NEIL1-218ENST00000568059 STK26Q9P289 416 aa23.61■■□□□ 1.37
NEIL1-218ENST00000568059 TMEM132EQ6IEE7 984 aa23.6■■□□□ 1.37
NEIL1-218ENST00000568059 ABCC11Q96J66 1382 aa23.6■■□□□ 1.37
NEIL1-218ENST00000568059 C14orf93Q9H972 538 aaKnown RBP23.58■■□□□ 1.37
NEIL1-218ENST00000568059 CFAP70Q5T0N1 1121 aa23.56■■□□□ 1.36
NEIL1-218ENST00000568059 DHX57Q6P158 1386 aaKnown RBP23.55■■□□□ 1.36
NEIL1-218ENST00000568059 PLEKHH1Q9ULM0 1364 aa23.54■■□□□ 1.36
NEIL1-218ENST00000568059 ADGRB1O14514 1584 aa23.54■■□□□ 1.36
NEIL1-218ENST00000568059 SPATA31A6Q5VVP1 1343 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms