RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 SCAF1Q9H7N4 1312 aaKnown RBP38.12■■■■□ 3.69
AC009041.3-201ENST00000564390 ALKQ9UM73 1620 aa38.12■■■■□ 3.69
AC009041.3-201ENST00000564390 PPP1R15AO75807 674 aaPredicted RBP38.12■■■■□ 3.69
AC009041.3-201ENST00000564390 BCANQ96GW7 911 aa38.12■■■■□ 3.69
AC009041.3-201ENST00000564390 PLEKHG1Q9ULL1 1385 aa38.1■■■■□ 3.69
AC009041.3-201ENST00000564390 PIP4K2BP78356 416 aa38.1■■■■□ 3.69
AC009041.3-201ENST00000564390 TRIM52Q96A61 297 aa38.1■■■■□ 3.69
AC009041.3-201ENST00000564390 XIRP1Q702N8 1843 aaKnown RBP38.09■■■■□ 3.69
AC009041.3-201ENST00000564390 TOM1O60784 492 aa38.08■■■■□ 3.69
AC009041.3-201ENST00000564390 NUTM2DQ5VT03 806 aaPredicted RBP38.08■■■■□ 3.69
AC009041.3-201ENST00000564390 CLTCL1P53675 1640 aa38.07■■■■□ 3.68
AC009041.3-201ENST00000564390 TRPM2O94759 1503 aa38.07■■■■□ 3.68
AC009041.3-201ENST00000564390 NWD1Q149M9 1564 aa38.04■■■■□ 3.68
AC009041.3-201ENST00000564390 HDGFP51858 240 aaKnown RBP38.03■■■■□ 3.68
AC009041.3-201ENST00000564390 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.01■■■■□ 3.68
AC009041.3-201ENST00000564390 KCNA6P17658 529 aa38■■■■□ 3.67
AC009041.3-201ENST00000564390 NKTRP30414 1462 aaKnown RBP37.96■■■■□ 3.67
AC009041.3-201ENST00000564390 TMEM94Q12767 1356 aa37.95■■■■□ 3.67
AC009041.3-201ENST00000564390 SLC4A1APQ9BWU0 796 aaKnown RBP37.95■■■■□ 3.67
AC009041.3-201ENST00000564390 ADAMTS13Q76LX8 1427 aa37.95■■■■□ 3.67
AC009041.3-201ENST00000564390 CHD2O14647 1828 aaKnown RBP37.93■■■■□ 3.66
AC009041.3-201ENST00000564390 DIP2AQ14689 1571 aa37.93■■■■□ 3.66
AC009041.3-201ENST00000564390 RBM33Q96EV2 1170 aaKnown RBP37.92■■■■□ 3.66
AC009041.3-201ENST00000564390 HSPA1LP34931 641 aa37.91■■■■□ 3.66
AC009041.3-201ENST00000564390 ZNF326Q5BKZ1 582 aaKnown RBP37.91■■■■□ 3.66
AC009041.3-201ENST00000564390 KIF1BO60333 1816 aa37.91■■■■□ 3.66
AC009041.3-201ENST00000564390 PROSER2Q86WR7 435 aaPredicted RBP37.9■■■■□ 3.66
AC009041.3-201ENST00000564390 TBX22Q9Y458 520 aa37.87■■■■□ 3.65
AC009041.3-201ENST00000564390 NRXN3Q9Y4C0 1643 aa37.87■■■■□ 3.65
AC009041.3-201ENST00000564390 NEXMIFQ5QGS0 1516 aa37.87■■■■□ 3.65
AC009041.3-201ENST00000564390 FOXD1Q16676 465 aa37.84■■■■□ 3.65
AC009041.3-201ENST00000564390 DISP3Q9P2K9 1392 aa37.82■■■■□ 3.65
AC009041.3-201ENST00000564390 SETBP1Q9Y6X0 1596 aa37.82■■■■□ 3.65
AC009041.3-201ENST00000564390 SETD5Q9C0A6 1442 aa37.77■■■■□ 3.64
AC009041.3-201ENST00000564390 PIK3R4Q99570 1358 aa37.75■■■■□ 3.63
AC009041.3-201ENST00000564390 PTPRUQ92729 1446 aa37.74■■■■□ 3.63
AC009041.3-201ENST00000564390 MSH6P52701 1360 aa37.72■■■■□ 3.63
AC009041.3-201ENST00000564390 MPHOSPH9Q99550 1183 aa37.72■■■■□ 3.63
AC009041.3-201ENST00000564390 XRN1Q8IZH2 1706 aaKnown RBP37.69■■■■□ 3.62
AC009041.3-201ENST00000564390 ROBO1Q9Y6N7 1651 aa37.66■■■■□ 3.62
AC009041.3-201ENST00000564390 CCDC144AA2RUR9 1427 aa37.66■■■■□ 3.62
AC009041.3-201ENST00000564390 METP08581 1390 aa37.66■■■■□ 3.62
AC009041.3-201ENST00000564390 RAB3GAP2Q9H2M9 1393 aa37.66■■■■□ 3.62
AC009041.3-201ENST00000564390 PPLO60437 1756 aa37.65■■■■□ 3.62
AC009041.3-201ENST00000564390 AMOTL2Q9Y2J4 779 aa37.65■■■■□ 3.62
AC009041.3-201ENST00000564390 MED1Q15648 1581 aaPredicted RBP37.63■■■■□ 3.61
AC009041.3-201ENST00000564390 FAM135BQ49AJ0 1406 aa37.62■■■■□ 3.61
AC009041.3-201ENST00000564390 C14orf37Q86TY3 774 aa37.62■■■■□ 3.61
AC009041.3-201ENST00000564390 NCOA3Q9Y6Q9 1424 aa37.6■■■■□ 3.61
AC009041.3-201ENST00000564390 SETD1AO15047 1707 aaKnown RBP37.58■■■■□ 3.61
AC009041.3-201ENST00000564390 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.58■■■■□ 3.61
AC009041.3-201ENST00000564390 VGFO15240 615 aaPredicted RBP37.56■■■■□ 3.6
AC009041.3-201ENST00000564390 RPGRIP1LQ68CZ1 1315 aa37.56■■■■□ 3.6
AC009041.3-201ENST00000564390 SPATA31E1Q6ZUB1 1445 aa37.54■■■■□ 3.6
AC009041.3-201ENST00000564390 ACIN1Q9UKV3 1341 aaKnown RBP37.53■■■■□ 3.6
AC009041.3-201ENST00000564390 ILDR2Q71H61 639 aa37.52■■■■□ 3.6
AC009041.3-201ENST00000564390 SLAIN2Q9P270 581 aa37.52■■■■□ 3.6
AC009041.3-201ENST00000564390 IFT172Q9UG01 1749 aa37.51■■■■□ 3.6
AC009041.3-201ENST00000564390 RGL3Q3MIN7 710 aa37.5■■■■□ 3.59
AC009041.3-201ENST00000564390 C19orf44Q9H6X5 657 aa37.47■■■■□ 3.59
AC009041.3-201ENST00000564390 ATF3P18847 181 aa37.44■■■■□ 3.58
AC009041.3-201ENST00000564390 ADGRF5Q8IZF2 1346 aa37.43■■■■□ 3.58
AC009041.3-201ENST00000564390 CADPS2Q86UW7 1296 aa37.43■■■■□ 3.58
AC009041.3-201ENST00000564390 PHLPP1O60346 1717 aa37.43■■■■□ 3.58
AC009041.3-201ENST00000564390 NALCNQ8IZF0 1738 aa37.43■■■■□ 3.58
AC009041.3-201ENST00000564390 DCCP43146 1447 aa37.39■■■■□ 3.58
AC009041.3-201ENST00000564390 PTCH1Q13635 1447 aa37.37■■■■□ 3.57
AC009041.3-201ENST00000564390 ADGRL3Q9HAR2 1447 aa37.37■■■■□ 3.57
AC009041.3-201ENST00000564390 ANKRD30BQ9BXX2 1392 aa37.37■■■■□ 3.57
AC009041.3-201ENST00000564390 ROBO2Q9HCK4 1378 aa37.35■■■■□ 3.57
AC009041.3-201ENST00000564390 COL16A1Q07092 1604 aaPredicted RBP37.32■■■■□ 3.57
AC009041.3-201ENST00000564390 PRAG1Q86YV5 1406 aa37.31■■■■□ 3.56
AC009041.3-201ENST00000564390 PIK3C2GO75747 1445 aa37.3■■■■□ 3.56
AC009041.3-201ENST00000564390 MST1RQ04912 1400 aa37.3■■■■□ 3.56
AC009041.3-201ENST00000564390 ASXL1Q8IXJ9 1541 aa37.3■■■■□ 3.56
AC009041.3-201ENST00000564390 PHF23Q9BUL5 403 aaPredicted RBP37.29■■■■□ 3.56
AC009041.3-201ENST00000564390 AHDC1Q5TGY3 1603 aaPredicted RBP37.28■■■■□ 3.56
AC009041.3-201ENST00000564390 BRINP3Q76B58 766 aa37.25■■■■□ 3.55
AC009041.3-201ENST00000564390 HRCP23327 699 aa37.23■■■■□ 3.55
AC009041.3-201ENST00000564390 MYOM2P54296 1465 aa37.23■■■■□ 3.55
AC009041.3-201ENST00000564390 STK26Q9P289 416 aa37.2■■■■□ 3.55
AC009041.3-201ENST00000564390 NRXN1Q9ULB1 1477 aa37.2■■■■□ 3.54
AC009041.3-201ENST00000564390 TMEM132EQ6IEE7 984 aa37.19■■■■□ 3.54
AC009041.3-201ENST00000564390 JCADQ9P266 1359 aa37.18■■■■□ 3.54
AC009041.3-201ENST00000564390 KNDC1Q76NI1 1749 aa37.18■■■■□ 3.54
AC009041.3-201ENST00000564390 LRPPRCP42704 1394 aaKnown RBP37.17■■■■□ 3.54
AC009041.3-201ENST00000564390 NHSL1Q5SYE7 1610 aa37.16■■■■□ 3.54
AC009041.3-201ENST00000564390 LAMC1P11047 1609 aa37.15■■■■□ 3.54
AC009041.3-201ENST00000564390 TECPR2O15040 1411 aa37.15■■■■□ 3.54
AC009041.3-201ENST00000564390 C1orf167Q5SNV9 1468 aa37.13■■■■□ 3.53
AC009041.3-201ENST00000564390 YTHDC2Q9H6S0 1430 aaKnown RBP37.11■■■■□ 3.53
AC009041.3-201ENST00000564390 SHPRHQ149N8 1683 aa37.1■■■■□ 3.53
AC009041.3-201ENST00000564390 CDC42BPGQ6DT37 1551 aa37.1■■■■□ 3.53
AC009041.3-201ENST00000564390 SOCS7O14512 581 aa37.1■■■■□ 3.53
AC009041.3-201ENST00000564390 CFAP70Q5T0N1 1121 aa37.09■■■■□ 3.53
AC009041.3-201ENST00000564390 ABCC11Q96J66 1382 aa37.08■■■■□ 3.53
AC009041.3-201ENST00000564390 PLEKHH1Q9ULM0 1364 aa37.08■■■■□ 3.53
AC009041.3-201ENST00000564390 WAPLQ7Z5K2 1190 aa37.08■■■■□ 3.53
AC009041.3-201ENST00000564390 C14orf93Q9H972 538 aaKnown RBP37.08■■■■□ 3.53
AC009041.3-201ENST00000564390 DDX17Q92841 729 aaKnown RBP37.07■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms