RNA–Protein interactions for RNA: ENST00000563850.1

VAT1L-202, Transcript of vesicle amine transport 1 like, humanhuman

TSL 5

Gene VAT1L, Length 615 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-202ENST00000563850 FYCO1Q9BQS8 1478 aa11.14□□□□□ -0.63
VAT1L-202ENST00000563850 C6orf132Q5T0Z8 1188 aa11.14□□□□□ -0.63
VAT1L-202ENST00000563850 POTEEQ6S8J3 1075 aa11.14□□□□□ -0.63
VAT1L-202ENST00000563850 AXIN2Q9Y2T1 843 aa11.14□□□□□ -0.63
VAT1L-202ENST00000563850 FHAD1B1AJZ9 1412 aa11.14□□□□□ -0.63
VAT1L-202ENST00000563850 ABCA5Q8WWZ7 1642 aa11.13□□□□□ -0.63
VAT1L-202ENST00000563850 TOPBP1Q92547 1522 aa11.13□□□□□ -0.63
VAT1L-202ENST00000563850 RIMBP3CA6NJZ7 1639 aa11.13□□□□□ -0.63
VAT1L-202ENST00000563850 RIMBP3BA6NNM3 1639 aa11.13□□□□□ -0.63
VAT1L-202ENST00000563850 RIMBP3Q9UFD9 1639 aa11.13□□□□□ -0.63
VAT1L-202ENST00000563850 PRIM1P49642 420 aaKnown RBP11.12□□□□□ -0.63
VAT1L-202ENST00000563850 PSEN2P49810 448 aa11.12□□□□□ -0.63
VAT1L-202ENST00000563850 KANK4Q5T7N3 995 aaPredicted RBP11.12□□□□□ -0.63
VAT1L-202ENST00000563850 MAPKBP1O60336 1514 aa11.12□□□□□ -0.63
VAT1L-202ENST00000563850 CARMIL1Q5VZK9 1371 aa11.12□□□□□ -0.63
VAT1L-202ENST00000563850 PPP1R3GB7ZBB8 358 aa11.11□□□□□ -0.63
VAT1L-202ENST00000563850 TSR1Q2NL82 804 aaKnown RBP11.11□□□□□ -0.63
VAT1L-202ENST00000563850 KRTAP3-3Q9BYR6 98 aa11.11□□□□□ -0.63
VAT1L-202ENST00000563850 KRTAP3-2Q9BYR7 98 aa11.11□□□□□ -0.63
VAT1L-202ENST00000563850 LRRIQ1Q96JM4 1722 aa11.11□□□□□ -0.63
VAT1L-202ENST00000563850 SAMD9Q5K651 1589 aa11.11□□□□□ -0.63
VAT1L-202ENST00000563850 LSM11P83369 360 aaKnown RBP eCLIP11.1□□□□□ -0.63
VAT1L-202ENST00000563850 POLA1P09884 1462 aaPredicted RBP11.1□□□□□ -0.63
VAT1L-202ENST00000563850 CERKQ8TCT0 537 aa11.09□□□□□ -0.63
VAT1L-202ENST00000563850 CYB5RLQ6IPT4 315 aa11.08□□□□□ -0.64
VAT1L-202ENST00000563850 GTF3C3Q9Y5Q9 886 aa11.08□□□□□ -0.64
VAT1L-202ENST00000563850 IFT140Q96RY7 1462 aa11.07□□□□□ -0.64
VAT1L-202ENST00000563850 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
VAT1L-202ENST00000563850 RANGAP1P46060 587 aaPredicted RBP11.07□□□□□ -0.64
VAT1L-202ENST00000563850 RBM26Q5T8P6 1007 aaKnown RBP11.07□□□□□ -0.64
VAT1L-202ENST00000563850 DMRTA1Q5VZB9 504 aa11.07□□□□□ -0.64
VAT1L-202ENST00000563850 CDHR5Q9HBB8 845 aa11.07□□□□□ -0.64
VAT1L-202ENST00000563850 ARHGEF11O15085 1522 aa11.07□□□□□ -0.64
VAT1L-202ENST00000563850 COL9A1P20849 921 aa11.06□□□□□ -0.64
VAT1L-202ENST00000563850 ANKRD13DQ6ZTN6 518 aa11.06□□□□□ -0.64
VAT1L-202ENST00000563850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.05□□□□□ -0.64
VAT1L-202ENST00000563850 CASKIN1Q8WXD9 1431 aa11.05□□□□□ -0.64
VAT1L-202ENST00000563850 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
VAT1L-202ENST00000563850 TK2O00142 265 aa11.04□□□□□ -0.64
VAT1L-202ENST00000563850 ZBED2Q9BTP6 218 aa11.04□□□□□ -0.64
VAT1L-202ENST00000563850 SLC4A5Q9BY07 1137 aa11.04□□□□□ -0.64
VAT1L-202ENST00000563850 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
VAT1L-202ENST00000563850 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
VAT1L-202ENST00000563850 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
VAT1L-202ENST00000563850 GPIHBP1Q8IV16 184 aa11.03□□□□□ -0.64
VAT1L-202ENST00000563850 SETD5Q9C0A6 1442 aa11.02□□□□□ -0.64
VAT1L-202ENST00000563850 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
VAT1L-202ENST00000563850 ADGRD1Q6QNK2 874 aa11.02□□□□□ -0.65
VAT1L-202ENST00000563850 EIF4G3O43432 1585 aaKnown RBP11.02□□□□□ -0.65
VAT1L-202ENST00000563850 PHLDB1Q86UU1 1377 aa11.02□□□□□ -0.65
VAT1L-202ENST00000563850 SUPT6HQ7KZ85 1726 aaKnown RBP11.01□□□□□ -0.65
VAT1L-202ENST00000563850 RAD54L2Q9Y4B4 1467 aa11.01□□□□□ -0.65
VAT1L-202ENST00000563850 FCHSD2O94868 740 aa11.01□□□□□ -0.65
VAT1L-202ENST00000563850 PTGDRQ13258 359 aa11.01□□□□□ -0.65
VAT1L-202ENST00000563850 GCC2Q8IWJ2 1684 aa11.01□□□□□ -0.65
VAT1L-202ENST00000563850 TARBP1Q13395 1621 aaKnown RBP11□□□□□ -0.65
VAT1L-202ENST00000563850 RBM27Q9P2N5 1060 aaKnown RBP11□□□□□ -0.65
VAT1L-202ENST00000563850 VPS9D1Q9Y2B5 631 aa11□□□□□ -0.65
VAT1L-202ENST00000563850 FHOD3Q2V2M9 1422 aa11□□□□□ -0.65
VAT1L-202ENST00000563850 EHBP1L1Q8N3D4 1523 aa10.99□□□□□ -0.65
VAT1L-202ENST00000563850 CHD1O14646 1710 aa10.99□□□□□ -0.65
VAT1L-202ENST00000563850 PRSS12P56730 875 aa10.99□□□□□ -0.65
VAT1L-202ENST00000563850 PROX2Q3B8N5 592 aa10.99□□□□□ -0.65
VAT1L-202ENST00000563850 CDCA7LQ96GN5 454 aa10.99□□□□□ -0.65
VAT1L-202ENST00000563850 NPDC1Q9NQX5 325 aaPredicted RBP10.99□□□□□ -0.65
VAT1L-202ENST00000563850 FMN1Q68DA7 1419 aa10.99□□□□□ -0.65
VAT1L-202ENST00000563850 TRIM6-TRIM34B2RNG4 842 aa10.98□□□□□ -0.65
VAT1L-202ENST00000563850 ONECUT3O60422 494 aaPredicted RBP10.97□□□□□ -0.65
VAT1L-202ENST00000563850 HIC1Q14526 733 aa10.97□□□□□ -0.65
VAT1L-202ENST00000563850 TDRD9Q8NDG6 1382 aaKnown RBP10.97□□□□□ -0.65
VAT1L-202ENST00000563850 GRIN2BQ13224 1484 aa10.97□□□□□ -0.65
VAT1L-202ENST00000563850 PTPN23Q9H3S7 1636 aa10.97□□□□□ -0.65
VAT1L-202ENST00000563850 HECW1Q76N89 1606 aa10.96□□□□□ -0.65
VAT1L-202ENST00000563850 RABGEF1Q9UJ41 708 aa10.96□□□□□ -0.65
VAT1L-202ENST00000563850 FGD6Q6ZV73 1430 aa10.95□□□□□ -0.66
VAT1L-202ENST00000563850 STAC3Q96MF2 364 aa10.95□□□□□ -0.66
VAT1L-202ENST00000563850 NBPF3Q9H094 633 aa10.95□□□□□ -0.66
VAT1L-202ENST00000563850 PADI6Q6TGC4 694 aa10.94□□□□□ -0.66
VAT1L-202ENST00000563850 PACS2Q86VP3 889 aa10.94□□□□□ -0.66
VAT1L-202ENST00000563850 ADAMTS12P58397 1594 aa10.94□□□□□ -0.66
VAT1L-202ENST00000563850 GNPATO15228 680 aa10.93□□□□□ -0.66
VAT1L-202ENST00000563850 GPR37O15354 613 aa10.93□□□□□ -0.66
VAT1L-202ENST00000563850 HRO43593 1189 aa10.93□□□□□ -0.66
VAT1L-202ENST00000563850 YTHDC1Q96MU7 727 aaKnown RBP10.93□□□□□ -0.66
VAT1L-202ENST00000563850 KIAA1468Q9P260 1216 aa10.93□□□□□ -0.66
VAT1L-202ENST00000563850 TSKSQ9UJT2 592 aa10.93□□□□□ -0.66
VAT1L-202ENST00000563850 UGGT2Q9NYU1 1516 aa10.93□□□□□ -0.66
VAT1L-202ENST00000563850 GAPVD1Q14C86 1478 aa10.93□□□□□ -0.66
VAT1L-202ENST00000563850 NBPF26B4DH59 902 aa10.92□□□□□ -0.66
VAT1L-202ENST00000563850 CCDC18Q5T9S5 1454 aa10.92□□□□□ -0.66
VAT1L-202ENST00000563850 SPNS2Q8IVW8 549 aa10.91□□□□□ -0.66
VAT1L-202ENST00000563850 MRPL50Q8N5N7 158 aaKnown RBP10.9□□□□□ -0.66
VAT1L-202ENST00000563850 TTC13Q8NBP0 860 aa10.9□□□□□ -0.66
VAT1L-202ENST00000563850 HFM1A2PYH4 1435 aa10.9□□□□□ -0.66
VAT1L-202ENST00000563850 IQGAP2Q13576 1575 aa10.9□□□□□ -0.67
VAT1L-202ENST00000563850 TCOF1Q13428 1488 aaKnown RBP10.89□□□□□ -0.67
VAT1L-202ENST00000563850 BHMG1C9JSJ3 638 aaPredicted RBP10.89□□□□□ -0.67
VAT1L-202ENST00000563850 FAM198AQ9UFP1 575 aa10.89□□□□□ -0.67
VAT1L-202ENST00000563850 TIMELESSQ9UNS1 1208 aa10.89□□□□□ -0.67
VAT1L-202ENST00000563850 NCOA2Q15596 1464 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms