RNA–Protein interactions for RNA: ENST00000560884.5

CPNE6-219, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-219ENST00000560884 TRIM52Q96A61 297 aa19.73■□□□□ 0.75
CPNE6-219ENST00000560884 NWD1Q149M9 1564 aa19.73■□□□□ 0.75
CPNE6-219ENST00000560884 PLEKHG1Q9ULL1 1385 aa19.7■□□□□ 0.74
CPNE6-219ENST00000560884 NRXN3Q9Y4C0 1643 aa19.7■□□□□ 0.74
CPNE6-219ENST00000560884 NEXMIFQ5QGS0 1516 aa19.7■□□□□ 0.74
CPNE6-219ENST00000560884 LRRC7Q96NW7 1537 aa19.7■□□□□ 0.74
CPNE6-219ENST00000560884 CHD2O14647 1828 aaKnown RBP19.69■□□□□ 0.74
CPNE6-219ENST00000560884 SLC4A1APQ9BWU0 796 aaKnown RBP19.69■□□□□ 0.74
CPNE6-219ENST00000560884 DIP2AQ14689 1571 aa19.69■□□□□ 0.74
CPNE6-219ENST00000560884 RAB3GAP2Q9H2M9 1393 aa19.69■□□□□ 0.74
CPNE6-219ENST00000560884 ALKQ9UM73 1620 aa19.68■□□□□ 0.74
CPNE6-219ENST00000560884 CHGAP10645 457 aaKnown RBP19.67■□□□□ 0.74
CPNE6-219ENST00000560884 SETBP1Q9Y6X0 1596 aa19.66■□□□□ 0.74
CPNE6-219ENST00000560884 PPLO60437 1756 aa19.66■□□□□ 0.74
CPNE6-219ENST00000560884 ADAMTS13Q76LX8 1427 aa19.66■□□□□ 0.74
CPNE6-219ENST00000560884 IFT172Q9UG01 1749 aa19.64■□□□□ 0.73
CPNE6-219ENST00000560884 NKTRP30414 1462 aaKnown RBP19.63■□□□□ 0.73
CPNE6-219ENST00000560884 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.63■□□□□ 0.73
CPNE6-219ENST00000560884 SLC26A8Q96RN1 970 aa19.63■□□□□ 0.73
CPNE6-219ENST00000560884 FOXD1Q16676 465 aa19.62■□□□□ 0.73
CPNE6-219ENST00000560884 MPHOSPH9Q99550 1183 aa19.62■□□□□ 0.73
CPNE6-219ENST00000560884 SETD1AO15047 1707 aaKnown RBP19.62■□□□□ 0.73
CPNE6-219ENST00000560884 ACIN1Q9UKV3 1341 aaKnown RBP19.61■□□□□ 0.73
CPNE6-219ENST00000560884 PPP1R15AO75807 674 aaPredicted RBP19.61■□□□□ 0.73
CPNE6-219ENST00000560884 HDGFP51858 240 aaKnown RBP19.6■□□□□ 0.73
CPNE6-219ENST00000560884 NUTM2DQ5VT03 806 aaPredicted RBP19.6■□□□□ 0.73
CPNE6-219ENST00000560884 XRN1Q8IZH2 1706 aaKnown RBP19.59■□□□□ 0.73
CPNE6-219ENST00000560884 CCDC144AA2RUR9 1427 aa19.58■□□□□ 0.72
CPNE6-219ENST00000560884 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
CPNE6-219ENST00000560884 SPATA31E1Q6ZUB1 1445 aa19.57■□□□□ 0.72
CPNE6-219ENST00000560884 KCNA6P17658 529 aa19.56■□□□□ 0.72
CPNE6-219ENST00000560884 UBAP1LF5GYI3 381 aa19.55■□□□□ 0.72
CPNE6-219ENST00000560884 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
CPNE6-219ENST00000560884 TBX22Q9Y458 520 aa19.55■□□□□ 0.72
CPNE6-219ENST00000560884 BCANQ96GW7 911 aa19.54■□□□□ 0.72
CPNE6-219ENST00000560884 PIK3R4Q99570 1358 aa19.54■□□□□ 0.72
CPNE6-219ENST00000560884 PTPRUQ92729 1446 aa19.52■□□□□ 0.72
CPNE6-219ENST00000560884 HRCP23327 699 aa19.52■□□□□ 0.72
CPNE6-219ENST00000560884 TMEM94Q12767 1356 aa19.52■□□□□ 0.72
CPNE6-219ENST00000560884 RPGRIP1LQ68CZ1 1315 aa19.49■□□□□ 0.71
CPNE6-219ENST00000560884 METP08581 1390 aa19.47■□□□□ 0.71
CPNE6-219ENST00000560884 ANKRD30BQ9BXX2 1392 aa19.46■□□□□ 0.71
CPNE6-219ENST00000560884 TOM1O60784 492 aa19.46■□□□□ 0.71
CPNE6-219ENST00000560884 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.45■□□□□ 0.7
CPNE6-219ENST00000560884 PROSER2Q86WR7 435 aaPredicted RBP19.45■□□□□ 0.7
CPNE6-219ENST00000560884 RBM33Q96EV2 1170 aaKnown RBP19.44■□□□□ 0.7
CPNE6-219ENST00000560884 PRAG1Q86YV5 1406 aa19.43■□□□□ 0.7
CPNE6-219ENST00000560884 NCOA3Q9Y6Q9 1424 aa19.43■□□□□ 0.7
CPNE6-219ENST00000560884 NALCNQ8IZF0 1738 aa19.43■□□□□ 0.7
CPNE6-219ENST00000560884 VGFO15240 615 aaPredicted RBP19.43■□□□□ 0.7
CPNE6-219ENST00000560884 ASXL1Q8IXJ9 1541 aa19.42■□□□□ 0.7
CPNE6-219ENST00000560884 PIP4K2BP78356 416 aa19.42■□□□□ 0.7
CPNE6-219ENST00000560884 ROBO1Q9Y6N7 1651 aa19.42■□□□□ 0.7
CPNE6-219ENST00000560884 PIK3C2GO75747 1445 aa19.42■□□□□ 0.7
CPNE6-219ENST00000560884 MYOM2P54296 1465 aa19.41■□□□□ 0.7
CPNE6-219ENST00000560884 NRXN1Q9ULB1 1477 aa19.41■□□□□ 0.7
CPNE6-219ENST00000560884 AMOTL2Q9Y2J4 779 aa19.41■□□□□ 0.7
CPNE6-219ENST00000560884 LAMC1P11047 1609 aa19.4■□□□□ 0.7
CPNE6-219ENST00000560884 ADGRF5Q8IZF2 1346 aa19.4■□□□□ 0.7
CPNE6-219ENST00000560884 KNDC1Q76NI1 1749 aa19.39■□□□□ 0.7
CPNE6-219ENST00000560884 RGL3Q3MIN7 710 aa19.39■□□□□ 0.69
CPNE6-219ENST00000560884 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
CPNE6-219ENST00000560884 MSH6P52701 1360 aa19.39■□□□□ 0.69
CPNE6-219ENST00000560884 PTCH1Q13635 1447 aa19.39■□□□□ 0.69
CPNE6-219ENST00000560884 HSPA1LP34931 641 aa19.36■□□□□ 0.69
CPNE6-219ENST00000560884 FAM135BQ49AJ0 1406 aa19.35■□□□□ 0.69
CPNE6-219ENST00000560884 DCCP43146 1447 aa19.34■□□□□ 0.69
CPNE6-219ENST00000560884 ADGRL3Q9HAR2 1447 aa19.34■□□□□ 0.69
CPNE6-219ENST00000560884 ROBO2Q9HCK4 1378 aa19.32■□□□□ 0.68
CPNE6-219ENST00000560884 TECPR2O15040 1411 aa19.32■□□□□ 0.68
CPNE6-219ENST00000560884 PHLPP1O60346 1717 aa19.29■□□□□ 0.68
CPNE6-219ENST00000560884 C19orf44Q9H6X5 657 aa19.29■□□□□ 0.68
CPNE6-219ENST00000560884 DHX57Q6P158 1386 aaKnown RBP19.28■□□□□ 0.68
CPNE6-219ENST00000560884 ADGRB1O14514 1584 aa19.27■□□□□ 0.68
CPNE6-219ENST00000560884 MST1RQ04912 1400 aa19.27■□□□□ 0.68
CPNE6-219ENST00000560884 COL16A1Q07092 1604 aaPredicted RBP19.27■□□□□ 0.68
CPNE6-219ENST00000560884 C14orf37Q86TY3 774 aa19.27■□□□□ 0.68
CPNE6-219ENST00000560884 LRPPRCP42704 1394 aaKnown RBP19.27■□□□□ 0.68
CPNE6-219ENST00000560884 MED1Q15648 1581 aaPredicted RBP19.27■□□□□ 0.67
CPNE6-219ENST00000560884 CDC42BPGQ6DT37 1551 aa19.27■□□□□ 0.67
CPNE6-219ENST00000560884 NHSL1Q5SYE7 1610 aa19.26■□□□□ 0.67
CPNE6-219ENST00000560884 AHDC1Q5TGY3 1603 aaPredicted RBP19.26■□□□□ 0.67
CPNE6-219ENST00000560884 SLAIN2Q9P270 581 aa19.26■□□□□ 0.67
CPNE6-219ENST00000560884 YTHDC2Q9H6S0 1430 aaKnown RBP19.25■□□□□ 0.67
CPNE6-219ENST00000560884 CADPS2Q86UW7 1296 aa19.25■□□□□ 0.67
CPNE6-219ENST00000560884 ABCC11Q96J66 1382 aa19.24■□□□□ 0.67
CPNE6-219ENST00000560884 C14orf93Q9H972 538 aaKnown RBP19.24■□□□□ 0.67
CPNE6-219ENST00000560884 KIAA1210Q9ULL0 1709 aa19.22■□□□□ 0.67
CPNE6-219ENST00000560884 ATF3P18847 181 aa19.22■□□□□ 0.67
CPNE6-219ENST00000560884 TRIM26Q12899 539 aaPredicted RBP19.22■□□□□ 0.67
CPNE6-219ENST00000560884 TMEM132EQ6IEE7 984 aa19.22■□□□□ 0.67
CPNE6-219ENST00000560884 DLC1Q96QB1 1528 aa19.21■□□□□ 0.67
CPNE6-219ENST00000560884 CFAP70Q5T0N1 1121 aa19.21■□□□□ 0.67
CPNE6-219ENST00000560884 FMN2Q9NZ56 1722 aa19.2■□□□□ 0.66
CPNE6-219ENST00000560884 PLEKHH1Q9ULM0 1364 aa19.19■□□□□ 0.66
CPNE6-219ENST00000560884 DCAF11Q8TEB1 546 aa19.19■□□□□ 0.66
CPNE6-219ENST00000560884 ARHGEF28Q8N1W1 1705 aaKnown RBP19.19■□□□□ 0.66
CPNE6-219ENST00000560884 STAC3Q96MF2 364 aa19.18■□□□□ 0.66
CPNE6-219ENST00000560884 SHPRHQ149N8 1683 aa19.17■□□□□ 0.66
CPNE6-219ENST00000560884 C1orf167Q5SNV9 1468 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms