RNA–Protein interactions for RNA: ENST00000560033.5

PSMA4-217, Transcript of proteasome subunit alpha 4, humanhuman

TSL 4

Gene PSMA4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-217ENST00000560033 TOPBP1Q92547 1522 aa11.32□□□□□ -0.6
PSMA4-217ENST00000560033 NUTM2FA1L443 756 aa11.32□□□□□ -0.6
PSMA4-217ENST00000560033 FCHSD2O94868 740 aa11.32□□□□□ -0.6
PSMA4-217ENST00000560033 FAM98CQ17RN3 349 aaKnown RBP11.32□□□□□ -0.6
PSMA4-217ENST00000560033 TATDN2Q93075 761 aa11.31□□□□□ -0.6
PSMA4-217ENST00000560033 KCTD12Q96CX2 325 aaKnown RBP11.31□□□□□ -0.6
PSMA4-217ENST00000560033 KIF27Q86VH2 1401 aa11.31□□□□□ -0.6
PSMA4-217ENST00000560033 THSD4Q6ZMP0 1018 aa11.3□□□□□ -0.6
PSMA4-217ENST00000560033 ZFRQ96KR1 1074 aaKnown RBP11.3□□□□□ -0.6
PSMA4-217ENST00000560033 URB2Q14146 1524 aaKnown RBP11.3□□□□□ -0.6
PSMA4-217ENST00000560033 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
PSMA4-217ENST00000560033 GOLGA3Q08378 1498 aa11.29□□□□□ -0.6
PSMA4-217ENST00000560033 KIF21AQ7Z4S6 1674 aa11.29□□□□□ -0.6
PSMA4-217ENST00000560033 HIC1Q14526 733 aa11.28□□□□□ -0.6
PSMA4-217ENST00000560033 WNT2BQ93097 391 aa11.28□□□□□ -0.6
PSMA4-217ENST00000560033 EYA1Q99502 592 aa11.28□□□□□ -0.6
PSMA4-217ENST00000560033 CUX2O14529 1486 aa11.27□□□□□ -0.6
PSMA4-217ENST00000560033 SMAPO00193 183 aa11.27□□□□□ -0.61
PSMA4-217ENST00000560033 UBTFP17480 764 aaKnown RBP11.27□□□□□ -0.61
PSMA4-217ENST00000560033 NUDT18Q6ZVK8 323 aa11.27□□□□□ -0.61
PSMA4-217ENST00000560033 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.27□□□□□ -0.61
PSMA4-217ENST00000560033 HCSTQ9UBK5 93 aa11.27□□□□□ -0.61
PSMA4-217ENST00000560033 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
PSMA4-217ENST00000560033 KIF21BO75037 1637 aa11.27□□□□□ -0.61
PSMA4-217ENST00000560033 POLA1P09884 1462 aaPredicted RBP11.26□□□□□ -0.61
PSMA4-217ENST00000560033 SOWAHBA6NEL2 793 aa11.26□□□□□ -0.61
PSMA4-217ENST00000560033 TNIKQ9UKE5 1360 aa11.26□□□□□ -0.61
PSMA4-217ENST00000560033 GOLGA8CPA6NN73 597 aa11.25□□□□□ -0.61
PSMA4-217ENST00000560033 ANKK1Q8NFD2 765 aa11.25□□□□□ -0.61
PSMA4-217ENST00000560033 ADGRG1Q9Y653 693 aa11.25□□□□□ -0.61
PSMA4-217ENST00000560033 MRC2Q9UBG0 1479 aa11.25□□□□□ -0.61
PSMA4-217ENST00000560033 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
PSMA4-217ENST00000560033 GNPATO15228 680 aa11.24□□□□□ -0.61
PSMA4-217ENST00000560033 FECHP22830 423 aa11.24□□□□□ -0.61
PSMA4-217ENST00000560033 GPIHBP1Q8IV16 184 aa11.24□□□□□ -0.61
PSMA4-217ENST00000560033 ABCA10Q8WWZ4 1543 aa11.21□□□□□ -0.61
PSMA4-217ENST00000560033 ERCC6Q03468 1493 aa11.21□□□□□ -0.61
PSMA4-217ENST00000560033 PRXQ9BXM0 1461 aa11.21□□□□□ -0.61
PSMA4-217ENST00000560033 RAPGEF2Q9Y4G8 1499 aa11.21□□□□□ -0.61
PSMA4-217ENST00000560033 BCAMP50895 628 aa11.21□□□□□ -0.61
PSMA4-217ENST00000560033 ERICH3Q5RHP9 1530 aa11.19□□□□□ -0.62
PSMA4-217ENST00000560033 CEP162Q5TB80 1403 aa11.19□□□□□ -0.62
PSMA4-217ENST00000560033 IGF1RP08069 1367 aa11.19□□□□□ -0.62
PSMA4-217ENST00000560033 TULP1O00294 542 aaPredicted RBP11.19□□□□□ -0.62
PSMA4-217ENST00000560033 SAMD7Q7Z3H4 446 aa11.19□□□□□ -0.62
PSMA4-217ENST00000560033 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
PSMA4-217ENST00000560033 LMOD2Q6P5Q4 547 aa11.18□□□□□ -0.62
PSMA4-217ENST00000560033 PTPN5P54829 565 aa11.17□□□□□ -0.62
PSMA4-217ENST00000560033 PXYLP1Q8TE99 480 aa11.17□□□□□ -0.62
PSMA4-217ENST00000560033 LRCH3Q96II8 777 aa11.17□□□□□ -0.62
PSMA4-217ENST00000560033 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.17□□□□□ -0.62
PSMA4-217ENST00000560033 WDR62O43379 1518 aa11.16□□□□□ -0.62
PSMA4-217ENST00000560033 RBM46Q8TBY0 533 aaKnown RBP11.16□□□□□ -0.62
PSMA4-217ENST00000560033 CARMIL1Q5VZK9 1371 aa11.15□□□□□ -0.63
PSMA4-217ENST00000560033 TDRD9Q8NDG6 1382 aaKnown RBP11.15□□□□□ -0.63
PSMA4-217ENST00000560033 WDR97A6NE52 1622 aa11.14□□□□□ -0.63
PSMA4-217ENST00000560033 OATP04181 439 aa11.14□□□□□ -0.63
PSMA4-217ENST00000560033 DNAJB2P25686 324 aa11.14□□□□□ -0.63
PSMA4-217ENST00000560033 METTL3Q86U44 580 aaKnown RBP11.14□□□□□ -0.63
PSMA4-217ENST00000560033 TMEM134Q9H6X4 195 aa11.14□□□□□ -0.63
PSMA4-217ENST00000560033 WBP1LQ9NX94 342 aa11.14□□□□□ -0.63
PSMA4-217ENST00000560033 TSR3Q9UJK0 312 aaKnown RBP11.14□□□□□ -0.63
PSMA4-217ENST00000560033 RCCD1A6NED2 376 aa11.13□□□□□ -0.63
PSMA4-217ENST00000560033 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
PSMA4-217ENST00000560033 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
PSMA4-217ENST00000560033 NYAP1Q6ZVC0 841 aa11.12□□□□□ -0.63
PSMA4-217ENST00000560033 HPS5Q9UPZ3 1129 aa11.12□□□□□ -0.63
PSMA4-217ENST00000560033 GAPVD1Q14C86 1478 aa11.12□□□□□ -0.63
PSMA4-217ENST00000560033 CLIP1P30622 1438 aa11.11□□□□□ -0.63
PSMA4-217ENST00000560033 ABCA5Q8WWZ7 1642 aa11.11□□□□□ -0.63
PSMA4-217ENST00000560033 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
PSMA4-217ENST00000560033 MAP2K5Q13163 448 aa11.11□□□□□ -0.63
PSMA4-217ENST00000560033 IFT140Q96RY7 1462 aa11.11□□□□□ -0.63
PSMA4-217ENST00000560033 RANGAP1P46060 587 aaPredicted RBP11.1□□□□□ -0.63
PSMA4-217ENST00000560033 PHOX2BQ99453 314 aa11.1□□□□□ -0.63
PSMA4-217ENST00000560033 THOC2Q8NI27 1593 aaKnown RBP11.1□□□□□ -0.63
PSMA4-217ENST00000560033 CUL7Q14999 1698 aa11.08□□□□□ -0.64
PSMA4-217ENST00000560033 ZMYND10O75800 440 aa11.08□□□□□ -0.64
PSMA4-217ENST00000560033 ZC3H15Q8WU90 426 aaKnown RBP11.08□□□□□ -0.64
PSMA4-217ENST00000560033 IRF6O14896 467 aa11.07□□□□□ -0.64
PSMA4-217ENST00000560033 SLF2Q8IX21 1173 aa11.07□□□□□ -0.64
PSMA4-217ENST00000560033 MINK1Q8N4C8 1332 aaPredicted RBP11.07□□□□□ -0.64
PSMA4-217ENST00000560033 PPP4CP60510 307 aa11.06□□□□□ -0.64
PSMA4-217ENST00000560033 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
PSMA4-217ENST00000560033 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.642e-7■■■■□ 26.1
PSMA4-217ENST00000560033 ITGBL1O95965 494 aaPredicted RBP11.05□□□□□ -0.64
PSMA4-217ENST00000560033 HDGFP51858 240 aaKnown RBP11.05□□□□□ -0.64
PSMA4-217ENST00000560033 BARGINQ6ZT62 677 aa11.05□□□□□ -0.64
PSMA4-217ENST00000560033 PLA2G2EQ9NZK7 142 aa11.04□□□□□ -0.64
PSMA4-217ENST00000560033 ZNF608Q9ULD9 1512 aaPredicted RBP11.04□□□□□ -0.64
PSMA4-217ENST00000560033 BCANQ96GW7 911 aa11.03□□□□□ -0.64
PSMA4-217ENST00000560033 GRIN2BQ13224 1484 aa11.03□□□□□ -0.64
PSMA4-217ENST00000560033 APLP1P51693 650 aa11.02□□□□□ -0.65
PSMA4-217ENST00000560033 TRIM26Q12899 539 aaPredicted RBP11.02□□□□□ -0.65
PSMA4-217ENST00000560033 PCGF6Q9BYE7 350 aa11.02□□□□□ -0.65
PSMA4-217ENST00000560033 SLC10A3P09131 477 aa11.01□□□□□ -0.65
PSMA4-217ENST00000560033 NECTIN2Q92692 538 aa11.01□□□□□ -0.65
PSMA4-217ENST00000560033 CCDC102AQ96A19 550 aa11.01□□□□□ -0.65
PSMA4-217ENST00000560033 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
PSMA4-217ENST00000560033 PBRM1Q86U86 1689 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms