RNA–Protein interactions for RNA: ENST00000558415.5

SPG21-206, Transcript of SPG21, maspardin, humanhuman

TSL 3

Gene SPG21, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-206ENST00000558415 ALKQ9UM73 1620 aa21.62■■□□□ 1.05
SPG21-206ENST00000558415 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
SPG21-206ENST00000558415 CLTCL1P53675 1640 aa21.59■■□□□ 1.05
SPG21-206ENST00000558415 PLEKHG1Q9ULL1 1385 aa21.59■■□□□ 1.05
SPG21-206ENST00000558415 TRPM2O94759 1503 aa21.58■■□□□ 1.04
SPG21-206ENST00000558415 PPP1R15AO75807 674 aaPredicted RBP21.57■■□□□ 1.04
SPG21-206ENST00000558415 TRIM52Q96A61 297 aa21.57■■□□□ 1.04
SPG21-206ENST00000558415 NWD1Q149M9 1564 aa21.57■■□□□ 1.04
SPG21-206ENST00000558415 NUTM2DQ5VT03 806 aaPredicted RBP21.56■■□□□ 1.04
SPG21-206ENST00000558415 BCANQ96GW7 911 aa21.56■■□□□ 1.04
SPG21-206ENST00000558415 TOM1O60784 492 aa21.55■■□□□ 1.04
SPG21-206ENST00000558415 PIP4K2BP78356 416 aa21.55■■□□□ 1.04
SPG21-206ENST00000558415 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
SPG21-206ENST00000558415 HDGFP51858 240 aaKnown RBP21.54■■□□□ 1.04
SPG21-206ENST00000558415 KCNA6P17658 529 aa21.53■■□□□ 1.04
SPG21-206ENST00000558415 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.53■■□□□ 1.04
SPG21-206ENST00000558415 CHD2O14647 1828 aaKnown RBP21.52■■□□□ 1.04
SPG21-206ENST00000558415 KIF1BO60333 1816 aa21.52■■□□□ 1.04
SPG21-206ENST00000558415 ADAMTS13Q76LX8 1427 aa21.51■■□□□ 1.03
SPG21-206ENST00000558415 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
SPG21-206ENST00000558415 NKTRP30414 1462 aaKnown RBP21.5■■□□□ 1.03
SPG21-206ENST00000558415 TMEM94Q12767 1356 aa21.49■■□□□ 1.03
SPG21-206ENST00000558415 DIP2AQ14689 1571 aa21.48■■□□□ 1.03
SPG21-206ENST00000558415 NRXN3Q9Y4C0 1643 aa21.48■■□□□ 1.03
SPG21-206ENST00000558415 NEXMIFQ5QGS0 1516 aa21.47■■□□□ 1.03
SPG21-206ENST00000558415 ZNF326Q5BKZ1 582 aaKnown RBP21.47■■□□□ 1.03
SPG21-206ENST00000558415 RBM33Q96EV2 1170 aaKnown RBP21.47■■□□□ 1.03
SPG21-206ENST00000558415 TBX22Q9Y458 520 aa21.47■■□□□ 1.03
SPG21-206ENST00000558415 HSPA1LP34931 641 aa21.46■■□□□ 1.03
SPG21-206ENST00000558415 PROSER2Q86WR7 435 aaPredicted RBP21.46■■□□□ 1.03
SPG21-206ENST00000558415 FOXD1Q16676 465 aa21.45■■□□□ 1.02
SPG21-206ENST00000558415 SETBP1Q9Y6X0 1596 aa21.44■■□□□ 1.02
SPG21-206ENST00000558415 SETD5Q9C0A6 1442 aa21.42■■□□□ 1.02
SPG21-206ENST00000558415 PTPRUQ92729 1446 aa21.39■■□□□ 1.02
SPG21-206ENST00000558415 PIK3R4Q99570 1358 aa21.39■■□□□ 1.02
SPG21-206ENST00000558415 MPHOSPH9Q99550 1183 aa21.39■■□□□ 1.01
SPG21-206ENST00000558415 DISP3Q9P2K9 1392 aa21.38■■□□□ 1.01
SPG21-206ENST00000558415 PPLO60437 1756 aa21.37■■□□□ 1.01
SPG21-206ENST00000558415 XRN1Q8IZH2 1706 aaKnown RBP21.37■■□□□ 1.01
SPG21-206ENST00000558415 RAB3GAP2Q9H2M9 1393 aa21.36■■□□□ 1.01
SPG21-206ENST00000558415 METP08581 1390 aa21.35■■□□□ 1.01
SPG21-206ENST00000558415 MSH6P52701 1360 aa21.35■■□□□ 1.01
SPG21-206ENST00000558415 AMOTL2Q9Y2J4 779 aa21.34■■□□□ 1.01
SPG21-206ENST00000558415 SETD1AO15047 1707 aaKnown RBP21.34■■□□□ 1.01
SPG21-206ENST00000558415 ROBO1Q9Y6N7 1651 aa21.34■■□□□ 1.01
SPG21-206ENST00000558415 CCDC144AA2RUR9 1427 aa21.33■■□□□ 1.01
SPG21-206ENST00000558415 FAM135BQ49AJ0 1406 aa21.32■■□□□ 1
SPG21-206ENST00000558415 NCOA3Q9Y6Q9 1424 aa21.31■■□□□ 1
SPG21-206ENST00000558415 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.31■■□□□ 1
SPG21-206ENST00000558415 RPGRIP1LQ68CZ1 1315 aa21.29■■□□□ 1
SPG21-206ENST00000558415 SPATA31E1Q6ZUB1 1445 aa21.29■■□□□ 1
SPG21-206ENST00000558415 IFT172Q9UG01 1749 aa21.29■■□□□ 1
SPG21-206ENST00000558415 MED1Q15648 1581 aaPredicted RBP21.29■■□□□ 1
SPG21-206ENST00000558415 ACIN1Q9UKV3 1341 aaKnown RBP21.29■■□□□ 1
SPG21-206ENST00000558415 VGFO15240 615 aaPredicted RBP21.28■■□□□ 1
SPG21-206ENST00000558415 C14orf37Q86TY3 774 aa21.28■■□□□ 1
SPG21-206ENST00000558415 SLAIN2Q9P270 581 aa21.26■□□□□ 0.99
SPG21-206ENST00000558415 RGL3Q3MIN7 710 aa21.24■□□□□ 0.99
SPG21-206ENST00000558415 ILDR2Q71H61 639 aa21.23■□□□□ 0.99
SPG21-206ENST00000558415 C19orf44Q9H6X5 657 aa21.23■□□□□ 0.99
SPG21-206ENST00000558415 NALCNQ8IZF0 1738 aa21.22■□□□□ 0.99
SPG21-206ENST00000558415 ADGRF5Q8IZF2 1346 aa21.22■□□□□ 0.99
SPG21-206ENST00000558415 PHLPP1O60346 1717 aa21.21■□□□□ 0.99
SPG21-206ENST00000558415 ATF3P18847 181 aa21.19■□□□□ 0.98
SPG21-206ENST00000558415 CADPS2Q86UW7 1296 aa21.19■□□□□ 0.98
SPG21-206ENST00000558415 ANKRD30BQ9BXX2 1392 aa21.19■□□□□ 0.98
SPG21-206ENST00000558415 DCCP43146 1447 aa21.19■□□□□ 0.98
SPG21-206ENST00000558415 PTCH1Q13635 1447 aa21.19■□□□□ 0.98
SPG21-206ENST00000558415 ADGRL3Q9HAR2 1447 aa21.18■□□□□ 0.98
SPG21-206ENST00000558415 ROBO2Q9HCK4 1378 aa21.17■□□□□ 0.98
SPG21-206ENST00000558415 PRAG1Q86YV5 1406 aa21.16■□□□□ 0.98
SPG21-206ENST00000558415 COL16A1Q07092 1604 aaPredicted RBP21.15■□□□□ 0.98
SPG21-206ENST00000558415 ASXL1Q8IXJ9 1541 aa21.15■□□□□ 0.98
SPG21-206ENST00000558415 PIK3C2GO75747 1445 aa21.15■□□□□ 0.98
SPG21-206ENST00000558415 HRCP23327 699 aa21.15■□□□□ 0.98
SPG21-206ENST00000558415 MST1RQ04912 1400 aa21.14■□□□□ 0.98
SPG21-206ENST00000558415 AHDC1Q5TGY3 1603 aaPredicted RBP21.13■□□□□ 0.97
SPG21-206ENST00000558415 MYOM2P54296 1465 aa21.11■□□□□ 0.97
SPG21-206ENST00000558415 NRXN1Q9ULB1 1477 aa21.11■□□□□ 0.97
SPG21-206ENST00000558415 BRINP3Q76B58 766 aa21.1■□□□□ 0.97
SPG21-206ENST00000558415 KNDC1Q76NI1 1749 aa21.09■□□□□ 0.97
SPG21-206ENST00000558415 TECPR2O15040 1411 aa21.07■□□□□ 0.96
SPG21-206ENST00000558415 TMEM132EQ6IEE7 984 aa21.07■□□□□ 0.96
SPG21-206ENST00000558415 PHF23Q9BUL5 403 aaPredicted RBP21.07■□□□□ 0.96
SPG21-206ENST00000558415 NHSL1Q5SYE7 1610 aa21.07■□□□□ 0.96
SPG21-206ENST00000558415 STK26Q9P289 416 aa21.06■□□□□ 0.96
SPG21-206ENST00000558415 LAMC1P11047 1609 aa21.06■□□□□ 0.96
SPG21-206ENST00000558415 LRPPRCP42704 1394 aaKnown RBP21.06■□□□□ 0.96
SPG21-206ENST00000558415 JCADQ9P266 1359 aa21.05■□□□□ 0.96
SPG21-206ENST00000558415 C1orf167Q5SNV9 1468 aa21.04■□□□□ 0.96
SPG21-206ENST00000558415 YTHDC2Q9H6S0 1430 aaKnown RBP21.04■□□□□ 0.96
SPG21-206ENST00000558415 ABCC11Q96J66 1382 aa21.03■□□□□ 0.96
SPG21-206ENST00000558415 C14orf93Q9H972 538 aaKnown RBP21.03■□□□□ 0.96
SPG21-206ENST00000558415 SHPRHQ149N8 1683 aa21.02■□□□□ 0.96
SPG21-206ENST00000558415 CDC42BPGQ6DT37 1551 aa21.02■□□□□ 0.96
SPG21-206ENST00000558415 CFAP70Q5T0N1 1121 aa21.02■□□□□ 0.96
SPG21-206ENST00000558415 PLEKHH1Q9ULM0 1364 aa21.01■□□□□ 0.95
SPG21-206ENST00000558415 WAPLQ7Z5K2 1190 aa21.01■□□□□ 0.95
SPG21-206ENST00000558415 DDX17Q92841 729 aaKnown RBP21■□□□□ 0.95
SPG21-206ENST00000558415 RGS17Q9UGC6 210 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms