RNA–Protein interactions for RNA: ENST00000553531.1

PTPN21-203, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-203ENST00000553531 EID1Q9Y6B2 187 aa18.05■□□□□ 0.48
PTPN21-203ENST00000553531 LRRC7Q96NW7 1537 aa18.04■□□□□ 0.48
PTPN21-203ENST00000553531 NWD1Q149M9 1564 aa18.02■□□□□ 0.48
PTPN21-203ENST00000553531 PLEKHG1Q9ULL1 1385 aa18.02■□□□□ 0.47
PTPN21-203ENST00000553531 KIF1BO60333 1816 aa18.01■□□□□ 0.47
PTPN21-203ENST00000553531 NRXN3Q9Y4C0 1643 aa18.01■□□□□ 0.47
PTPN21-203ENST00000553531 CHD2O14647 1828 aaKnown RBP18■□□□□ 0.47
PTPN21-203ENST00000553531 TRIM52Q96A61 297 aa17.99■□□□□ 0.47
PTPN21-203ENST00000553531 ADAMTS13Q76LX8 1427 aa17.98■□□□□ 0.47
PTPN21-203ENST00000553531 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
PTPN21-203ENST00000553531 SLC26A8Q96RN1 970 aa17.98■□□□□ 0.47
PTPN21-203ENST00000553531 CHGAP10645 457 aaKnown RBP17.97■□□□□ 0.47
PTPN21-203ENST00000553531 SETD5Q9C0A6 1442 aa17.97■□□□□ 0.47
PTPN21-203ENST00000553531 SLC4A1APQ9BWU0 796 aaKnown RBP17.96■□□□□ 0.47
PTPN21-203ENST00000553531 NUTM2DQ5VT03 806 aaPredicted RBP17.95■□□□□ 0.46
PTPN21-203ENST00000553531 DIP2AQ14689 1571 aa17.95■□□□□ 0.46
PTPN21-203ENST00000553531 SETBP1Q9Y6X0 1596 aa17.94■□□□□ 0.46
PTPN21-203ENST00000553531 UBAP1LF5GYI3 381 aa17.93■□□□□ 0.46
PTPN21-203ENST00000553531 FOXD1Q16676 465 aa17.93■□□□□ 0.46
PTPN21-203ENST00000553531 RAB3GAP2Q9H2M9 1393 aa17.92■□□□□ 0.46
PTPN21-203ENST00000553531 PPLO60437 1756 aa17.92■□□□□ 0.46
PTPN21-203ENST00000553531 KCNA6P17658 529 aa17.92■□□□□ 0.46
PTPN21-203ENST00000553531 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.92■□□□□ 0.46
PTPN21-203ENST00000553531 NKTRP30414 1462 aaKnown RBP17.92■□□□□ 0.46
PTPN21-203ENST00000553531 MPHOSPH9Q99550 1183 aa17.91■□□□□ 0.46
PTPN21-203ENST00000553531 SETD1AO15047 1707 aaKnown RBP17.91■□□□□ 0.46
PTPN21-203ENST00000553531 PPP1R15AO75807 674 aaPredicted RBP17.9■□□□□ 0.46
PTPN21-203ENST00000553531 IFT172Q9UG01 1749 aa17.89■□□□□ 0.46
PTPN21-203ENST00000553531 HDGFP51858 240 aaKnown RBP17.89■□□□□ 0.45
PTPN21-203ENST00000553531 TBX22Q9Y458 520 aa17.89■□□□□ 0.45
PTPN21-203ENST00000553531 XRN1Q8IZH2 1706 aaKnown RBP17.89■□□□□ 0.45
PTPN21-203ENST00000553531 PTPRUQ92729 1446 aa17.89■□□□□ 0.45
PTPN21-203ENST00000553531 TMEM94Q12767 1356 aa17.88■□□□□ 0.45
PTPN21-203ENST00000553531 SPATA31E1Q6ZUB1 1445 aa17.87■□□□□ 0.45
PTPN21-203ENST00000553531 PIK3R4Q99570 1358 aa17.86■□□□□ 0.45
PTPN21-203ENST00000553531 TOM1O60784 492 aa17.84■□□□□ 0.45
PTPN21-203ENST00000553531 ZNF326Q5BKZ1 582 aaKnown RBP17.84■□□□□ 0.45
PTPN21-203ENST00000553531 RBM33Q96EV2 1170 aaKnown RBP17.84■□□□□ 0.45
PTPN21-203ENST00000553531 BCANQ96GW7 911 aa17.84■□□□□ 0.45
PTPN21-203ENST00000553531 CCDC144AA2RUR9 1427 aa17.83■□□□□ 0.45
PTPN21-203ENST00000553531 METP08581 1390 aa17.82■□□□□ 0.44
PTPN21-203ENST00000553531 ACIN1Q9UKV3 1341 aaKnown RBP17.81■□□□□ 0.44
PTPN21-203ENST00000553531 PIP4K2BP78356 416 aa17.81■□□□□ 0.44
PTPN21-203ENST00000553531 PROSER2Q86WR7 435 aaPredicted RBP17.81■□□□□ 0.44
PTPN21-203ENST00000553531 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.78■□□□□ 0.44
PTPN21-203ENST00000553531 RPGRIP1LQ68CZ1 1315 aa17.78■□□□□ 0.44
PTPN21-203ENST00000553531 HRCP23327 699 aa17.78■□□□□ 0.44
PTPN21-203ENST00000553531 HSPA1LP34931 641 aa17.77■□□□□ 0.44
PTPN21-203ENST00000553531 NCOA3Q9Y6Q9 1424 aa17.77■□□□□ 0.44
PTPN21-203ENST00000553531 ROBO1Q9Y6N7 1651 aa17.77■□□□□ 0.43
PTPN21-203ENST00000553531 AMOTL2Q9Y2J4 779 aa17.76■□□□□ 0.43
PTPN21-203ENST00000553531 ANKRD30BQ9BXX2 1392 aa17.76■□□□□ 0.43
PTPN21-203ENST00000553531 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
PTPN21-203ENST00000553531 ASXL1Q8IXJ9 1541 aa17.75■□□□□ 0.43
PTPN21-203ENST00000553531 NALCNQ8IZF0 1738 aa17.75■□□□□ 0.43
PTPN21-203ENST00000553531 PRAG1Q86YV5 1406 aa17.74■□□□□ 0.43
PTPN21-203ENST00000553531 VGFO15240 615 aaPredicted RBP17.74■□□□□ 0.43
PTPN21-203ENST00000553531 ADGRF5Q8IZF2 1346 aa17.73■□□□□ 0.43
PTPN21-203ENST00000553531 FAM135BQ49AJ0 1406 aa17.73■□□□□ 0.43
PTPN21-203ENST00000553531 NRXN1Q9ULB1 1477 aa17.72■□□□□ 0.43
PTPN21-203ENST00000553531 MSH6P52701 1360 aa17.72■□□□□ 0.43
PTPN21-203ENST00000553531 PIK3C2GO75747 1445 aa17.72■□□□□ 0.43
PTPN21-203ENST00000553531 RGL3Q3MIN7 710 aa17.71■□□□□ 0.43
PTPN21-203ENST00000553531 MYOM2P54296 1465 aa17.69■□□□□ 0.42
PTPN21-203ENST00000553531 PTCH1Q13635 1447 aa17.69■□□□□ 0.42
PTPN21-203ENST00000553531 KNDC1Q76NI1 1749 aa17.68■□□□□ 0.42
PTPN21-203ENST00000553531 ROBO2Q9HCK4 1378 aa17.67■□□□□ 0.42
PTPN21-203ENST00000553531 DCCP43146 1447 aa17.67■□□□□ 0.42
PTPN21-203ENST00000553531 MED1Q15648 1581 aaPredicted RBP17.66■□□□□ 0.42
PTPN21-203ENST00000553531 ADGRL3Q9HAR2 1447 aa17.66■□□□□ 0.42
PTPN21-203ENST00000553531 C19orf44Q9H6X5 657 aa17.66■□□□□ 0.42
PTPN21-203ENST00000553531 SLAIN2Q9P270 581 aa17.65■□□□□ 0.42
PTPN21-203ENST00000553531 LAMC1P11047 1609 aa17.65■□□□□ 0.42
PTPN21-203ENST00000553531 COL16A1Q07092 1604 aaPredicted RBP17.64■□□□□ 0.41
PTPN21-203ENST00000553531 PHLPP1O60346 1717 aa17.64■□□□□ 0.41
PTPN21-203ENST00000553531 TECPR2O15040 1411 aa17.64■□□□□ 0.41
PTPN21-203ENST00000553531 MST1RQ04912 1400 aa17.64■□□□□ 0.41
PTPN21-203ENST00000553531 AHDC1Q5TGY3 1603 aaPredicted RBP17.61■□□□□ 0.41
PTPN21-203ENST00000553531 DHX57Q6P158 1386 aaKnown RBP17.61■□□□□ 0.41
PTPN21-203ENST00000553531 C14orf37Q86TY3 774 aa17.6■□□□□ 0.41
PTPN21-203ENST00000553531 CADPS2Q86UW7 1296 aa17.6■□□□□ 0.41
PTPN21-203ENST00000553531 LRPPRCP42704 1394 aaKnown RBP17.6■□□□□ 0.41
PTPN21-203ENST00000553531 DISP3Q9P2K9 1392 aa17.6■□□□□ 0.41
PTPN21-203ENST00000553531 ADGRB1O14514 1584 aa17.6■□□□□ 0.41
PTPN21-203ENST00000553531 NHSL1Q5SYE7 1610 aa17.6■□□□□ 0.41
PTPN21-203ENST00000553531 C14orf93Q9H972 538 aaKnown RBP17.59■□□□□ 0.41
PTPN21-203ENST00000553531 YTHDC2Q9H6S0 1430 aaKnown RBP17.58■□□□□ 0.41
PTPN21-203ENST00000553531 ABCC11Q96J66 1382 aa17.58■□□□□ 0.4
PTPN21-203ENST00000553531 TMEM132EQ6IEE7 984 aa17.58■□□□□ 0.4
PTPN21-203ENST00000553531 CDC42BPGQ6DT37 1551 aa17.57■□□□□ 0.4
PTPN21-203ENST00000553531 ATF3P18847 181 aa17.57■□□□□ 0.4
PTPN21-203ENST00000553531 PLEKHH1Q9ULM0 1364 aa17.56■□□□□ 0.4
PTPN21-203ENST00000553531 CFAP70Q5T0N1 1121 aa17.56■□□□□ 0.4
PTPN21-203ENST00000553531 BRINP3Q76B58 766 aa17.56■□□□□ 0.4
PTPN21-203ENST00000553531 C1orf167Q5SNV9 1468 aa17.54■□□□□ 0.4
PTPN21-203ENST00000553531 ILDR2Q71H61 639 aa17.53■□□□□ 0.4
PTPN21-203ENST00000553531 STK26Q9P289 416 aa17.53■□□□□ 0.4
PTPN21-203ENST00000553531 FMN2Q9NZ56 1722 aa17.52■□□□□ 0.4
PTPN21-203ENST00000553531 SHPRHQ149N8 1683 aa17.52■□□□□ 0.4
PTPN21-203ENST00000553531 WAPLQ7Z5K2 1190 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms